the flows of energy are key to how the biosphere works ... and energetics... · the flows of...

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The flows of energy are key to how the biosphere works, heralding back to the days of Vernadsky. This lecture will discuss energy and the routes it flows through the biosphere as used by plants, microbes and higher organisms. Capture of solar energy is key, but some microbial life are able to extract chemical energy from their environment by redox. Energy fixed and stored as carbon compounds is eventually cycled through food webs feeding lower and lower trophic levels. 1

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Page 1: The flows of energy are key to how the biosphere works ... and Energetics... · The flows of energy are key to how the biosphere works, heralding back to the days of Vernadsky

Theflowsofenergyarekeytohowthebiosphereworks,heraldingbacktothedaysofVernadsky.Thislecturewilldiscussenergyandtheroutesitflowsthroughthebiosphereasusedbyplants,microbesandhigherorganisms.Captureofsolarenergyiskey,butsomemicrobiallifeareabletoextractchemicalenergyfromtheirenvironmentbyredox.Energyfixedandstoredascarboncompoundsiseventuallycycledthroughfoodwebsfeedinglowerandlowertrophiclevels.

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Wonderfulbook.IfyouhaveEmetoreadforpleasureandcuriositysakeIrecommendthisbookforallbiospherians.

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ThesearesomeoftheoverarchingquesEonsassociatedwiththelinksbetweenEnergyandtheBiosphere.Canyouthinkofothersthatcomefromyourlifeexperiencesorinterests?

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hKp://www.phibetaiota.net/wp-content/uploads/2014/04/energy-six-forms.jpg

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Itisa‘tongueincheck’statementtogetyouraKenEon.Buttherearemanytruthstoit,especiallybylinkingPhysicsandBiology.Modernsciencecannotaffordtoworkinsilosofonlyphysicsoronlybiology.Thetwofieldsofbiologyandphysicsmustinteract,togetabeKerappreciaEonabouthowthebiosphereworks.Lifeissustainablebecauseitre-cyclesmaterialandisabletoextractasmuchenergyoutofthesystemaspossible,throughmulEpletrophiclevels.EvoluEonispowerfulasitenablesorganismstodevelopstructuresandfuncEonsthatareopEmizedfortheirenvironment.ThisisnottosaymulEplewaysareviable,justwalkthroughthedesert.ButitdoessaythatcertainformsandfuncEonsarenotviable.100mtallredwoodtreesdon’tgrowinthedesert,forexample.ThefirstpartofthisstatementcametomindwhenIwasinIndiaridingajitney.ObservingautomoEvechaoseverywhereIaskedthedriverwhereIcouldfindtheseatbelt.ThetaxidriverseemedinsultedandquesEonedmytrustinhisdrivingability.Iretorted‘Iwanttoberestrainedbecauseinthecaseofanaccident,because‘Physicswins’‘;Isurelydidnotwanttogetprojectedthroughthewindshieldifhecametoanabruptstop.Seriously,thebasisforthisstatementcomesfromobservaEon,researchand

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Theseexamplesclearlystatethehowphysicssetslimitsonmetabolism,formandfuncEon

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ExamplesonhowBiologydoesit…otherwiseallyouhaveisdeadrocksrollingdownhills.Thisisnotlife.

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ExamplesofthelinksbetweenEnergyandWorkandtheUnitsassociatedwiththeseterms.Ifyouforget,gobacktofirstprinciples.WorkisforceEmesdistance.WeknowfromdroppingarockthataforceismassEmesacceleraEon.AndweknowthatanacceleraEonisthechangeinvelocitywithEme(meterpersecondpersecond)

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EnergyFuelsMetabolism

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ParkNobel

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hKps://dr282zn36sxxg.cloudfront.net/datastreams/f-d%3A7c60c5dca8db65ef72d28224ee8a5f6de5be626ee1f049e9a2f67266%2BIMAGE_THUMB_POSTCARD%2BIMAGE_THUMB_POSTCARD.1d%3A7c60c5dca8db65ef72d28224ee8a5f6de5be626ee1f049e9a2f67266%2BIMAGE_THUMB_POSTCARD%2BIMAGE_THUMB_POSTCARD.1

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I’vecometoviewtheprocessoflife,likeabaKery.TheflowofelectronsfromchemicalenergydrivesthisbaKeryandtheflows,gainsandlossesofelectronsareassociatedwithREDOX.WhendeeismoreexpertonthistopicandwillcoveritmoreandbeKerwithdecomposiEon.

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QuesEoninclassaboutunits,permoleculeorpermole.WorkingthroughthecomputaEonswefindGibbsFreeenergyisJoulespermole

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HereitisenoughtoshowhowadeptlifeisatextracEngenergyfromitsenvironment.KnowingthesedifferentroutesandhowactswithineachboxisimportantOnefracEonofthebiosphereisdominatedbythephototrophs,thosewhoeatsunlight.TheotherfracEonisdominatedbyChemotrophs.TheyeitherderiveenergyfromorganicmaKerorareLithotrophsandableto‘eat’chemicalenergystoredinminerals.ItisimportanttoRecallandRemembertheChemicalEnergyusedbyOrganoTrophsUlEmatelycamefromPhotoTrophsandtheSun.Burginetal2011FronEersEcology

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ProfBanfieldwillcoverthistopicingreatdetailonherlectureonCarbonMetabolism.LightEnergysplitswaterandelectronsarereleased,andoxygenisformedGenerallessonsatthisstageare:lightenergyisusedtosplitwaterreleasing4electronsandproducingOxygen.Theseelectronsaretransportedandinter-convertedintobiochemicalenergycompounds,ATPandNADPH,thatulEmatelyleadtothefixaEonofCO2;energyisstoredinchemicalcompounds,sugars,andtherespiraEon(oxidaEon)ofthesesugarsprovideenergyformetabolismandthefoodchangesofprimary,secondaryandterEaryconsumers.

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AnexampleofthestoichiometryofthephotosyntheEccarbonreducEon(PCR)andthephotosyntheEccarbonoxidaEon(photorespiraEoncycles).Inthiscase,itisscaledwithinaninputof3CO2moleculesTheenzymeribulose-1,5-bisphosphatecarboxylase(Rubisco)catalyzesthereacEonbetweengaseouscarbondioxideandribulose-1,5-bisphosphate(RuBP).ProductofthereacEonaretwomoleculesof3-phosphoglycericacidforeachCO2moleculeC5O3H8(PO4

2-)2+CO2->2C3O3H4PO42-

RUBISCOhasanaffinityforbothCO2andO2,withthelaterleadingtophotorespiraEon,alossofCO2.TherateofcompeEEveoxygenfixaEonisaproporEonaltotheoxygenconcentraEonEmetheraEoofoxygenaEon(Vo)tocarboxylaEon(Vc).AtambientcondiEonsVo/Vcisabout0.27(2EmestheCO2compensaEonpointdividedbyCO2;~2x38/280).InpracEceforeachCO2consumedbycarboxylaEon0.5CO2EmesVo/VcarelostbyphotorespiraEon;

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WealwaysseetheNetreacEons,egCH2O+O2=CO2+H2O.ButitisimportanttoexploretheRedoxHalfreacEonsandseehowmanyelectronsarebeingshuKledbackandforth,asthesedrivetheulEmateenergeEcs.Weseewerelease500kJpercarbonhydrateand3000kJperglucosemolecule,thesugarfixedbyphotosynthesis.

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AdaptedfromBurgin.Withampleoxygen,OrganicCisconsumedandCO2andH2Oareproduced.IfO2isdepleted,NitratebecomestheelectronacceptorandN2gasandCO2isproduced.NextFe(III)gainsanelectron,formingFe(II)andCO2.LowestinEnergyyieldisSO4–asanelectronacceptor.H2SandCO2areformed

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MegonigalandHines

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Conceptual models of redox-associated mechanisms for generaEng self-potenEals:(a)classicalgeobaKerymodel [axerSatoandMooney,1960;Reviletal.,2010]and(b)biogeobaKerymodel[axerNaudetandRevil,2005;Reviletal.,2010].IFTHISIMAGEHASBEENPROVIDEDBYORISOWNEDBYATHIRDPARTY,ASINDICATEDINTHECAPTIONLINE,THENFURTHERPERMISSIONMAYBENEEDEDBEFOREANYFURTHERUSE.PLEASECONTACTWILEY'SPERMISSIONSDEPARTMENTONPERMISSIONS@WILEY.COMORUSETHERIGHTSLINKSERVICEBYCLICKINGONTHE'REQUESTPERMISSIONS'LINKACCOMPANYINGTHISARTICLE.WILEYORAUTHOROWNEDIMAGESMAYBEUSEDFORNON-COMMERCIALPURPOSES,SUBJECTTOPROPERCITATIONOFTHEARTICLE,AUTHOR,ANDPUBLISHER.

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InthislessonweconcentrateontheuElizaEonofsolarenergyatfieldandfarmscales.Inessence,howmaychemicalenergyisstoredthroughfieldphotosynthesisgiventheabundantamountsofenergydiscussedabove?And,howmuchcarboncanbeextractedfromtheatmospherebytheseprocesses?ThesecalculaEonsareforsolarradiaEonfluxdensityaveragedacrosstheEarth’ssurface,161Wm-2;simplisEcasitisrespecttothehemispherethatincludesoceans,anddoesnotconsiderthegeographicaldistribuEonofland,sunlightandplantsPSEfficiency,adaptedfromBoltonandHall1991

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OnlyasmallporEonofincidentsunlightisactuallycaptureandconvertedtobiomass.Hence,biofuelsmaybealessefficientalternaEvetocapturingsunlightthansolarpanels.AndthisfigureignorestheaddiEonallossofrespiraEonduetogrowthandmaintanence.

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For1MJofsunlightabout1%ofthatenergywillbeproducedintothebiomassofprimaryproducers.About1to10%ofthisenergywillbeusedbyprimaryconsumers,herbivores,likeinsects,caKle,grazers,etc.Evenlessenergyisdispensedtosecondaryconsumerswhomayeattheprimaryconsumersanddetritus.EvenlessenergyislexfortheterEaryconsumers,whomayresideatthetopoftheinvertedfoodpyramid

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Less and Less energy is available at higher and higher Trophic Levels, Less energy, less mass…but larger individuals. The classic textbook example of the inverted pyramid for aquatic systems is misleading. The large whales and sharks at the top are actually sustained by large pools of plankton and krill that have short life times and fast turn over (2 to 6 days). It is more appropriate to consider the mass of this primary productive over the course of a year than its mass at a give instant. And it is more appropriate to consider the mass of large carnivores and mass of small primary producers over a large area..then there is coherency between the pyramids of energy and the pyramids of biomass Global integrated chlorophyll biomass is 4 to 5 Tg.. Phytoplankton turn over every 2 to 6 days! Ocean NPP is ~50 Pg/y Behrenfeld,M.J.,R.T.O/'Malley,D.A.Siegel,C.R.McClain,J.L.Sarmiento,G.C.Feldman,A.J.Milligan,P.G.Falkowski,R.M.Letelier,andE.S.Boss.2006.Climate-driventrendsincontemporaryoceanproducEvity.N

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Thebeautyofcomplexsystemsisthataspectsoftheirbehaviorcanbepredictedbypowerlaws.Sothereis‘order’and‘rules’amongchaos.Inthiscasethereareonlysomanyindividualssustainableonaplotofland,giveacertainsize.Youcaneitherhavealotofsmallindividualsorafewlargeindividualsforunitareaofland.Thisisanexampleoftheself-organizingandpredicEveaspectofcomplexsystems.PredicEonsfollowsapowerlaw,withlog-logscaling,withaknownslope,orpowerlawexponent,inthiscase-4/3.

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Themetabolicenergy,B,neededtosustainmetabolismscaleswiththemassoftheorganismtothe¾powerMaxKleiberwasazoologistatUCDavis.Itookmycoursesonbiologyandbotany,asanundergrad,inKleiberHall.Sadly,Idon’trecallweweretoldofhisimpactonsciencethen.

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Exampleofthe‘Universality’ofKleiber’slawover21ordersofmagnitudeofmass

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Exampleofthemutualconstraintsofsizeandmass,onlylargethingscanhavemuchmass

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FromSchlesinger’sbook

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