the primary products of the norway spruce diterpene ... · 25-04-2011  · similarity of palas and...

20
- 1 - THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE SYNTHASE PaLAS ARE EPIMERS OF A THERMALLY UNSTABLE DITERPENOL* Christopher I. Keeling, Lina L. Madilao, Philipp Zerbe, Harpreet K. Dullat, and Jörg Bohlmann Michael Smith Laboratories, University of British Columbia, 301-2185 East Mall, Vancouver BC Canada V6T 1Z4 Running head: Norway spruce diterpene synthase products Address correspondence to: Jörg Bohlmann, Phone: 604-822-0282, Fax: 604-822-2114, Email: [email protected] The levopimaradiene/abietadiene synthase from Norway spruce (Picea abies) (PaLAS) has previously been reported to produce a mixture of four diterpene hydrocarbons when incubated with geranylgeranyl diphosphate as the substrate: levopimaradiene, abietadiene, neoabietadiene, and palustradiene. However, variability in the assay products observed by GC-MS of this and orthologous conifer diterpene synthases over the past 15 years suggested that these diterpenes may not be the initial enzyme assay products but are rather the products of dehydration of an unstable alcohol. We have identified epimers of the thermally unstable allylic tertiary alcohol, 13-hydroxy-8(14)- abietene, as the products of PaLAS. The identification of these compounds, not previously described in conifers, as the initial products of PaLAS has considerable implications for our understanding of the complexity of the biosynthetic pathway of the structurally diverse diterpene resin acids of conifer defence. Diterpene resins acids play an important role in conifer defence against herbivores and pathogens (1,2). They are biosynthesized by the cyclization of geranylgeranyl diphosphate by single- or multi-product diterpene synthases (Fig. 1) and the subsequent oxidation by cytochromes P450 at carbon-18 (3). To date, only two types of diterpene synthases have been characterized in conifer resin acid biosynthesis, those that produce isopimaradiene and sandaracopimaradiene (4,5), and those that produce a mixture of abietadiene, levopimaradiene, neoabietadiene, and palustradiene (4-7). So far, only one cytochrome P450 of diterpene resin acid biosynthesis, CYP720B1 from loblolly pine (Pinus taeda) has been reported to oxidize a small subset of these diterpenes (3). These three enzymes are not sufficient to generate the structural and functional diversity of the diterpene resin acids observed in conifer resin (2), requiring the further characterization of these and other enzymes (4,8). The first diterpene synthase in conifers to be characterized was the abietadiene synthase from grand fir (Abies grandis, AgAS) and was originally reported to produce 98% abietadiene (9). Interestingly, the products of AgAS were subsequently demonstrated to be sensitive to the assay work up conditions; when passed through silica gel and MgSO 4 prior to GC-MS analysis, abietadiene was the major product (9). However, without this treatment step, levopimaradiene, abietadiene, and neoabietadiene were seen in nearly equal amounts along with minor amounts of palustradiene (6). This inconsistency was hypothesized to be the result of isomerisation of levopimaradiene and neoabietadiene to abietadiene with the silica gel and MgSO 4 treatment (6), but was not investigated further until now. Consequently, AgAS was described as a multi- product diterpene synthase (6). Subsequent research has identified three orthologous diterpene synthases, the levopimaradiene/abietadiene synthases in Norway spruce (Picea abies, PaLAS) (5), loblolly pine (Pinus taeda, PtLAS) (7), and Sitka spruce (Picea sitchensis, PsLAS) (4), as well as a paralogous diterpene synthase in two of these species, the isopimaradiene synthases in Norway spruce (PaIso) (5), and Sitka spruce (PsIso) (4). All of these subsequent studies did not use the silica gel- MgSO 4 assay work up and all of the LAS enzymes produced similar multiple products: levopimaradiene, abietadiene, neoabietadiene, and palustradiene. In the process of identifying the residues that determine product profile differences between the two paralogous diterpene synthases from Norway spruce PaIso and PaLAS through site- directed mutagenesis (10), we were surprised to http://www.jbc.org/cgi/doi/10.1074/jbc.M111.245951 The latest version is at JBC Papers in Press. Published on April 25, 2011 as Manuscript M111.245951 Copyright 2011 by The American Society for Biochemistry and Molecular Biology, Inc. by guest on December 14, 2020 http://www.jbc.org/ Downloaded from

Upload: others

Post on 25-Aug-2020

3 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 1 -

THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE SYNTHASE PaLAS ARE EPIMERS OF A THERMALLY UNSTABLE DITERPENOL*

Christopher I. Keeling, Lina L. Madilao, Philipp Zerbe, Harpreet K. Dullat, and Jörg Bohlmann Michael Smith Laboratories, University of British Columbia, 301-2185 East Mall, Vancouver BC Canada

V6T 1Z4 Running head: Norway spruce diterpene synthase products

Address correspondence to: Jörg Bohlmann, Phone: 604-822-0282, Fax: 604-822-2114, Email: [email protected]

The levopimaradiene/abietadiene

synthase from Norway spruce (Picea abies) (PaLAS) has previously been reported to produce a mixture of four diterpene hydrocarbons when incubated with geranylgeranyl diphosphate as the substrate: levopimaradiene, abietadiene, neoabietadiene, and palustradiene. However, variability in the assay products observed by GC-MS of this and orthologous conifer diterpene synthases over the past 15 years suggested that these diterpenes may not be the initial enzyme assay products but are rather the products of dehydration of an unstable alcohol. We have identified epimers of the thermally unstable allylic tertiary alcohol, 13-hydroxy-8(14)-abietene, as the products of PaLAS. The identification of these compounds, not previously described in conifers, as the initial products of PaLAS has considerable implications for our understanding of the complexity of the biosynthetic pathway of the structurally diverse diterpene resin acids of conifer defence.

Diterpene resins acids play an important role in conifer defence against herbivores and pathogens (1,2). They are biosynthesized by the cyclization of geranylgeranyl diphosphate by single- or multi-product diterpene synthases (Fig. 1) and the subsequent oxidation by cytochromes P450 at carbon-18 (3). To date, only two types of diterpene synthases have been characterized in conifer resin acid biosynthesis, those that produce isopimaradiene and sandaracopimaradiene (4,5), and those that produce a mixture of abietadiene, levopimaradiene, neoabietadiene, and palustradiene (4-7). So far, only one cytochrome P450 of diterpene resin acid biosynthesis, CYP720B1 from loblolly pine (Pinus taeda) has been reported to oxidize a small subset of these diterpenes (3). These three enzymes are not

sufficient to generate the structural and functional diversity of the diterpene resin acids observed in conifer resin (2), requiring the further characterization of these and other enzymes (4,8).

The first diterpene synthase in conifers to be characterized was the abietadiene synthase from grand fir (Abies grandis, AgAS) and was originally reported to produce 98% abietadiene (9). Interestingly, the products of AgAS were subsequently demonstrated to be sensitive to the assay work up conditions; when passed through silica gel and MgSO4 prior to GC-MS analysis, abietadiene was the major product (9). However, without this treatment step, levopimaradiene, abietadiene, and neoabietadiene were seen in nearly equal amounts along with minor amounts of palustradiene (6). This inconsistency was hypothesized to be the result of isomerisation of levopimaradiene and neoabietadiene to abietadiene with the silica gel and MgSO4 treatment (6), but was not investigated further until now. Consequently, AgAS was described as a multi-product diterpene synthase (6).

Subsequent research has identified three orthologous diterpene synthases, the levopimaradiene/abietadiene synthases in Norway spruce (Picea abies, PaLAS) (5), loblolly pine (Pinus taeda, PtLAS) (7), and Sitka spruce (Picea sitchensis, PsLAS) (4), as well as a paralogous diterpene synthase in two of these species, the isopimaradiene synthases in Norway spruce (PaIso) (5), and Sitka spruce (PsIso) (4). All of these subsequent studies did not use the silica gel-MgSO4 assay work up and all of the LAS enzymes produced similar multiple products: levopimaradiene, abietadiene, neoabietadiene, and palustradiene.

In the process of identifying the residues that determine product profile differences between the two paralogous diterpene synthases from Norway spruce PaIso and PaLAS through site-directed mutagenesis (10), we were surprised to

http://www.jbc.org/cgi/doi/10.1074/jbc.M111.245951The latest version is at JBC Papers in Press. Published on April 25, 2011 as Manuscript M111.245951

Copyright 2011 by The American Society for Biochemistry and Molecular Biology, Inc.

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 2: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 2 -

find that the relative ratios of the LAS-like products were completely unaffected by the various mutants we prepared even though some mutants also produced isopimaradiene. Our existing understanding of the mechanism of this and other terpene synthases would have predicted that mutations in the active site were very likely to change the proportion of products of multi-product enzymes (11-18). However, we did notice anecdotally that there was a significant change in the ratio of these PaLAS-like products that depended upon the conditions and temperature of the GC-MS injector and column. We also observed two products that had not previously been described (although seen (10)) from these or related diterpene synthases when analysed on a brand new GC-MS system. These observations, and the prior observations with AgAS, lead us to re-examine the product profile of PaLAS. EXPERIMENTAL PROCEDURES

Preparation of Recombinant Enzyme

Assay Products—Recombinant pseudomature enzymes (PaIso and PaLAS) were produced from 1 L E. coli cultures and Ni-affinity purified as previously described (10). Single vial enzyme assays with geranylgeranyl diphosphate (Sigma-Aldrich) as substrate were completed as previously described in 50 mM HEPES, 100 mM KCl, 7.5 mM MgCl2, 0.02 mM MnCl2, 5% glycerol, pH 7.2 (10). Unlike some prior methods for terpene synthase assays, this method does not pass the products through a silica column with MgSO4, nor requires concentrating the pentane extract prior to GC-MS analysis.

Standards—Abietic acid was obtained from Orchid Celmark, New Westminster, BC, Canada. Abietadiene and abietadienol were prepared by Best West Labs Inc. (Salt Lake City, UT, USA) from abietic acid as previously described (3). Synthesis of (±)-13-hydroxy-8(14)-abietene from (±)-alpha-cyclocitral (Toronto Research Chemicals, North York, ON, Canada) was attempted by Best West Labs Inc. as previously described (19) with the exception of the final isopropanylation step, which used the method of Gu et al. (20).

GC-MS Analyses—GC-MS analyses were conducted on Agilent HP5ms (5% phenyl methyl siloxane, 30 m, 250 µm i.d., 0.25 µm film) and

DB-WAX (polyethylene glycol, 30 m, 250 µm i.d., 0.25 µm film) columns at 1 mL min-1 He on an Agilent 6890N GC, 7683B series autosampler (vertical syringe position of 8), and a 5975 Inert XL MS Detector at 70 eV. Temperatures of the MS transfer line, source, and quadrupole were 230, 250, and 150°C, respectively.

When comparing on-column and split/split-less injections, a DB-WAX column with the following oven program was used: 40°C for 3 min, 10°C min-1 to 240°C and then hold for 20 min. For pulsed split/split-less injections, the injector was held at 240°C. For on-column injections, the inlet started at 40°C and tracked the oven temperature program.

PaLAS and PaIso enzyme assay products were normally analyzed directly, but to confirm an alcohol moiety by GC-MS, a 100 µL portion of the pentane extract of the PaLAS assay was also gently evaporated with a N2 gas stream and then derivatized overnight at room temperature with bis-trimethylsilyltrifluoroacetimide (BSTFA, Sigma-Aldrich) and then redissolved in 100 µL of pentane prior to analysis on the HP5ms column.

Silica Chromatography—A Pasteur pipette was loaded with 250 mg of silica gel (Sigma, for column chromatography) held in place with glass wool and washed with 10 mL of pentane. The combined assay products of PaLAS and PaIso (0.5 mL each in pentane) were applied to the column and then four 1 mL fractions of pentane and then two 1 mL fractions of diethyl ether were collected and analyzed by GC-MS on the HP5ms column.

LC-MS Analyses—LC-MS analyses were conducted on an Agilent 1100 Series LC/MSD Trap XCT Plus Mass Spectrometer with an atmospheric pressure chemical ionization (APCI) interface. Chromatography was completed on a Zorbax RX-Sil 4.6 mm ID x 150 mm x 5 µm silica column (Agilent) with isocratic elution of pentane/ether (80:20) at 30°C at 1.4 mL min-1. Post-column, 0.1 mL min-1 of 0.2% formic acid in pentane:ether (80:20) was added via a T-fitting by syringe pump to assist ionization. APCI-MS conditions: APCI temperature 350°C, dry temperature 325°C, nebulizer 60 psi, dry gas flow 7 L min-1, high voltage capillary 3 kV, positive mode, 40-350 amu scan range.

NMR Analyses—Four large-scale enzyme assays were completed each with 3 mg of Ni-

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 3: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 3 -

affinity purified pseudomature PaLAS per 10 mL assay overlaid with 1 mL of alumina-purified pentane. To minimize impurities, the assay buffer was pre-extracted with alumina-purified pentane prior to use. Geranylgeranyl diphosphate (Echelon, 1 mg per assay) was added over 90 min with gentle stirring at room temperature and then the assay was continued for an additional 60 min. Assay products were extracted 3x with alumina-purified pentane and the combined extracts gently evaporated to approximately 100 µL with a N2 gas stream. The residue was diluted with benzene-d6 (Sigma Aldrich) and further evaporated to approximately 300 µL. The solution was transferred to a 3 mm NMR tube and analyzed by 1H-NMR, HMBC, HSQC, 1H-1H COSY and NOESY using a Bruker Avance 600 MHz NMR spectrometer.

Computational structure analysis—Homology models of PaIso and PaLAS were built using the CPHmodels 3.0 server (21) based on the tertiary structure of taxadiene synthase from Taxus brevifolia (PDB-ID 3P5R:A, (22)) and further subjected to a final energy minimization using the YASARA server (23). Modeled structures were certified as high quality with Ramachandran plot statistics exceeding 90% using PROCHECK (24). Lack of structural errors in the models was validated using the ProSA-web server (25). Structural comparisons were generated using the DaliLite server (26) and showed a high structural similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0 (27) was applied to perform the molecular docking of (+)-copalyl diphosphate and 13-hydroxy-8(14)-abietene in presence of the cleaved diphosphate group into the predicted class I cavity of PaLAS and PaIso. PDB coordinates of ligands were generated using the Dundee PRODRG2 server (28). RESULTS From the series of experiments detailed below, we have obtained multiple lines of evidence that the initial diterpene products formed and released by PaLAS in the in vitro assays with geranylgeranyl diphosphate were not hydrocarbons, but instead were epimeric thermally unstable allylic tertiary alcohols that subsequently dehydrate under the conditions of analysis to the

multiple diterpene hydrocarbons previously described as the reaction products of LAS enzymes. Based on these results, we propose that the reaction mechanism of PaLAS proceeds via water quenching of the abieta-8(14)-en-13-yl carbocation, resulting in 13-hydroxy-8(14)-abietene (Fig. 1).

GC-MS Analyses—We found that PaLAS, which is thought to utilize a previously described rearrangement route for product formation (Fig. 1, route a), produced two new compounds in an approximate 1:20 ratio that have not previously been reported as products in these or related enzymes, in addition to levopimaradiene, abietadiene, neoabietadiene, and palustradiene (Fig. 2A; peaks 6 and 7). Their retention indices were 2216/2820 and 2230/2894 on the HP5ms and DB-WAX columns respectively, compared to 2060/2354, 2067/2369, 2131/2495, and 2199/2596 for palustradiene, levopimaradiene, abietadiene, and neoabietadiene, respectively. The retention indices of these additional products suggested they were much more polar than the other diterpenes. The mass spectra of these new peaks (Fig. 2B) were identical to each other and nearly identical to that of abietadiene (Fig. 2C), except for an additional strong peak at m/z 247. As loss of a fragment of m/z 25 from a molecular ion of 272 to get to 247 was not plausible, we postulated that this ion was indicative of loss of an isopropyl group, [M-43]+, from an allylic diterpenol with molecular weight of 290 (molecular ion not detected) and the m/z 272 peak was from loss of water, [M-18]+. Derivatization with BSTFA resulted in the disappearance of both polar peaks and the appearance of two new peaks (Fig. 3; peaks 9 and 11), in addition to abietadiene, levopimaradiene, neoabietadiene, and palustradiene (with dramatically different ratios and abietadiene predominating). The two new peaks both showed a dominating fragment at m/z 319 (Fig. 3, inset), suggesting a loss of an isopropyl group [M-43]+ from a TMS-diterpenol (with mol. wt. 362), paralleling a similar loss of an isopropyl group from the underivatized compound. Also, we observed a weak fragment at m/z 347 [M-15]+, suggesting a loss of a methyl group from the TMS group. We postulated that these newly described peaks in the GC-MS product profile of PaLAS were the epimers of 13-hydroxy-8(14)-

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 4: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 4 -

abietene due to water quenching of the abieta-8(14)-en-13-yl+ carbocation (Fig. 1, route a).

From these observations, we suspected that the high temperature of the GC-MS injector was sufficient to dehydrate the allylic alcohol products into the diterpenes previously assigned as the products of PaLAS and other LAS-type diterpene synthases. Using a cold on-column injector, but a similar GC oven temperature program, we observed that the diterpene peaks significantly decreased and the diterpenol peaks increased in intensity, confirming that the diterpenes were not the initial products of the in vitro enzyme activity (Fig. 4A). Interestingly, a hump in the baseline was observed as the temperature of the GC oven increased, which abruptly stopped when the second diterpenol (peak 7) eluted (Fig. 4A). The mass spectrum of this hump was very similar to abietadiene. This observation suggested that the diterpenols were also dynamically dehydrating to the less-retained hydrocarbons within the GC column as the oven temperature increased.

When combined with cold on-column injection and a lower final oven temperature (150°C), the proportion of the diterpenol products increased further (Fig. 4B; peaks 6 and 7). With cold on-column injection and chemical ionization (positive mode, CH4 as the reagent gas), we observed a weak but apparent m/z 291, consistent with a diterpenol [M+H]+.

The significant intensity of the fragments with m/z 272 and 257 for the diterpenol peaks, under any of the GC and MS conditions tested, including cold on-column injection and chemical ionization, suggested that dehydration of these compounds to diterpenes (m/z 272, [M-18]+) and subsequent loss of a methyl group (m/z 257, [(M-18)-33]+) were also occurring within the heated transfer line and the heated and high-energy mass spectrometer.

Silica chromatography—To confirm the polar nature of the products of the PaLAS in vitro enzyme activity, which are unlike the non-polar assay product isopimaradiene from PaIso (Fig. 1, route b), and to avoid the confound of heating during the chromatographic step, we combined the assay products of these two enzymes and separated the individual compounds by silica chromatography at room temperature. The products of PaIso and PaLAS in pentane were

combined and loaded onto a silica-filled Pasteur pipette column and then eluted with pentane (four 1 mL fractions), diethyl ether (two 1 mL fractions) and then analysed by GC-MS. We observed that isopimaradiene eluted very early, as would be expected, in the first and second pentane fractions, but only very small amounts of LAS-like products were observed in any of these and subsequent pentane fractions (Fig. 5). However, the LAS-like products were observed in fractions eluted from the silica column with diethyl ether, in the same fraction as containing the putative diterpenol peaks. The observation that these non-polar hydrocarbons were eluting in a polar solvent, but unlike isopimaradiene did not elute with the non-polar solvent, is consistent with them not being the initial products of PaLAS in vitro enzyme activity. Instead, they appeared to be the dehydration products of polar products of PaLAS that eluted in this polar fraction and dehydrated into the non-polar diterpenes during the subsequent GC-MS analysis.

LC-MS analyses—To further corroborate the results from the silica chromatography, we analysed the assay products of PaLAS by LC-APCI-MS in positive mode. The products from an enzyme assay with PaLAS did not show the presence of any non-polar diterpenes but rather a compound of intermediate polarity. As shown in Fig. 6, the LAS product was a relatively polar product, which eluted between the authentic abietadiene and abietadienol. The elution pattern was consistent with polar products such as alcohols, not hydrocarbons. The CI mass spectrum of the polar product peak showed a dominating m/z 273, similar to abietadiene. We propose that this ion was the [M+H]+ of the hydrocarbon products of dehydration of the allylic diterpenols, where dehydration occurred after chromatography but during ionization due to the high temperature of the APCI-MS interface.

NMR Analyses—We combined products from several large-scale enzyme assays to obtain material for structure confirmation by NMR. Assay products were prepared in benzene-d6 because the same method in CDCl3 resulted in dehydration of the assay products. The NMR analyses were consistent with 13-hydroxy-8(14)-abietene as the assay product. We observed only one olefinic hydrogen resonance and the resonances for the single hydrogen atoms on

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 5: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 5 -

carbon-9 and carbon-15 confirm that the assay product cannot be any of the previously described hydrocarbons (Table 1). The material recovered from the enzyme assays was not sufficient for 13C-NMR. However, HMBC was used to make assignments for the carbons. The stereochemistry of carbon-13 could not be determined definitively by NOESY (Fig. 7). The lack of an NOE observed between H11β and H16 or H17, and very weak NOEs observed between H12β and H16, and H14 and H17, suggested that the stereochemistry of the hydroxyl group was β for the most abundant epimer, but this assignment was not well supported.

Synthesis of predicted product—To confirm the physical and chemical properties with an authentic standard, we and others attempted to obtain (±)-13-hydroxy-8(14)-abietene by synthesis from (±)-alpha-cyclocitral using previously reported methods (19). Unfortunately, despite repeated attempts, the desired compound could not be obtained in a sufficient amount for application as an authentic standard, principally due to dehydration upon final workup and the low yield of an intermediate isomerization step. The previously described method of synthesis (19) proved difficult to reproduce, preventing the direct comparison of the PaLAS assay products with an authentic standard.

Computational structure analysis—We modelled the structures of PaLAS and PaIso based on the structure of taxadiene synthase from Taxus brevifolia (22) to draw insight into the origin of product differences. The most energetically favourable binding located 13-hydroxy-8(14)-abietene in the centre of the active site cavity of both proteins, with the hydroxyl group facing towards the aspartate-rich DDxxD motif on helix D. As to be expected, the cleaved diphosphate group was chelated to the Mg2+ cluster. However, it is not known whether or not the diphosphate remains in the active site as a counter ion in the course of the PaLAS catalyzed reaction. Sixteen residues were found within a 7 Å radius from the hydroxyl group of 13-hydroxy-8(14)-abietene. Interestingly, these included three of the four amino acids previously identified to determine the distinct product specificity of PaLAS and PaIso (10), namely Y686 (~5 Å), A713 (~6 Å) and V717 (~6 Å). No other significant differences were

observed, reinforcing the importance of these specific residues. DISCUSSION

The results of the present study provide several lines of evidence suggesting that the initial product formed and released by PaLAS in vitro were unstable alcohols identified here as epimeric thermally unstable allylic tertiary alcohols, 13-hydroxy-8(14)-abietene. Although water capture of a carbocation intermediate and formation of terpenol products is not unusual in terpene synthases, especially monoterpene synthases, it has rarely been described for diterpene synthases. One example however is the formation of ent-16α-hydroxykaurene as the major product of the ent-kaurene synthase from Physcomitrella patens (29). This product however is not an allylic tertiary alcohol, and is thus less labile to dehydration. The diterpene alcohols described in this paper have not previously been reported to be products of PaLAS or related conifer diterpene synthases.

We suggest that the dehydration of the alcohol products of PaLAS, yielding the well established diterpene products levopimaradiene, abietadiene, neoabietadiene, and palustradiene, occurred due to three conditions of the GC-MS analysis typically used for identification of diterpene synthase products: a hot injector, a hot oven temperature necessary for eluting the compounds, and the high temperature and high energy of the MS and its interface. Using a cold on-column injector rather than a split/splitless injector, and using a lower maximum oven temperature, we were able to increase the abundance of the polar products but not prevent at least partial dehydration on the GC column and significant dehydration in the MS. Other conditions at room temperature are likely to promote dehydration such as evaporating to dryness, and the use of drying agents and strong acids. In prior research, the in vivo production of diterpene resin acids in metabolically engineered yeast containing the genes encoding geranylgeranyl diphosphate synthase and PaLAS produced only abietadiene and none of the other diterpenes previously found in the multi-product profiles of LAS-type enzymes (3). At the time, this simpler product profile was rationalized as the

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 6: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 6 -

lower pH of the yeast culture medium affecting enzyme product profile. However, given the results presented here, it is likely that the culture conditions, assay extraction, and/or workup procedures may have dehydrated the initial PaLAS assay products.

To the best of our knowledge, diterpenoids with a hydroxyl group at carbon-13 have not been found in previous analyses of Norway spruce resin or the resin of other spruce species (30,31). Whether their apparent absence is due to enzymatic or non-enzymatic dehydration in planta or due to their sensitivity to dehydration ex planta in the process of resin extraction and analysis is not known and will be difficult to resolve. However, diterpenoids with a hydroxyl or ether group at this same position have recently been described in Pinus massoniana resin (32). Analogous compounds with the opposite stereochemistry have also been characterized in Solidago spp. and were described as having similar sensitivities to dehydration and similar mass spectral fragmentation patterns ([M-H2O]+ and [M-C3H7]+) (33). If indeed the diterpenol is the initial product of PaLAS, it is possible that there may be an additional enzymatic or non-enzymatic step in the biosynthesis of the known diterpene resin acids of Norway spruce and other conifers. This step may occur prior to the oxidation at carbon-18 by cytochromes P450s of the CYP720B subfamily, such as CYP720B1 (3,8), or after.

The assay product of PaIso does not behave chromatographically like that of PaLAS, and appears to truly be isopimaradiene (Figs. 1 and 5). The significant differences in the kinetic parameters we previously reported between these two enzymes reflect their differing mechanisms; PaLAS has a catalytic efficiency (kcat/Km) 20 times higher than PaIso, principally due to differences in kcat (10). This difference may originate from the difference in polarity of the products, as the release of non-polar products such as isopimaradiene is thought to be rate-determining for terpene synthases (34,35). The release of polar diterpene alcohol product from the active site of PaLAS may account for the observed higher catalytic efficiency of this enzyme compared to PaIso. The kinetic parameters for AgAS (6) are very similar to those of PaLAS, suggesting that AgAS may also produce the diterpenol products

rather than the hydrocarbons directly, consistent with the observed variability in product profiles that have been reported previously with this enzyme (6,9).

Computational structure analyses indicated that three of four residues we had previously identified to contribute to the different product profiles of PaIso and PaLAS (10) were near the hydroxyl group of 13-hydroxy-8(14)-abietene. Although closest to the hydroxyl group, the hydrophobic nature of Y686 in PaLAS compared to the more hydrophilic H694 in PaIso could not support the coordination of a water molecule in this position and prior reciprocal mutation of this residue is not sufficient alone to change product profiles in PaLAS or PaIso (10). However, the corresponding residue in the Physcomitrella patens ent-kaurene synthase, A710, has recently been identified to contribute to the formation of 16α-hydroxy-ent-kaurene (36). This residue determines whether the ent-kauranyl cation is captured by water to produce the alcohol, or loses a proton to produce ent-kaurene. In PaLAS, the A713S mutant previously described prevented LAS-like products from forming, and instead produced isopimaradiene and sandaracopimaradiene (10). We speculate that A713 in PaLAS generates enough space for a water molecule compared to the respective S721 in PaIso (this residue is A737 in Physcomitrella patens ent-kaurene synthase). In light of the results of the present study, it is now apparent that the four mutations that determine product differences between PaIso and PaLAS (10) are likely to determine the presence and position of water molecules in the active site in addition to the stabilization of alternative carbocations. Recent similar work with mutations of the levopimaradiene synthase from Ginkgo biloba resulted in the production of abietadiene in addition to levopimaradiene (37). It would be interesting to determine if these mutant enzymes also produce a diterpenol product or the hydrocarbons directly.

The identification of the in vitro product of PaLAS enzyme activity reinforces the caution that must be observed when assuming the products analyzed by GC-MS, which subjects the analytes to high temperatures, actually reflect the true enzyme products. This notion has precedence in the identification of alcohol products of some

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 7: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 7 -

sesquiterpene synthases (e.g. (38)). The present study may resolve some of the discussion about single- or multiproduct profiles of LAS type diterpene synthases, a topic that was first raised

with the variability of product identification of the grand fir AgAS enzyme (6,9).

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 8: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 8 -

REFERENCES 1. Keeling, C. I., and Bohlmann, J. (2006) New Phytol. 170, 657-675 2. Keeling, C. I., and Bohlmann, J. (2006) Phytochemistry 67, 2415-2423 3. Ro, D.-K., Arimura, G., Lau, S. Y., Piers, E., and Bohlmann, J. (2005) Proc. Natl. Acad. Sci. USA

102, 8060-8065 4. Keeling, C. I., Weisshaar, S., Ralph, S. G., Jancsik, S., Hamberger, B., Dullat, H. K., and

Bohlmann, J. (2011) BMC Plant Biol. 11, 43 5. Martin, D. M., Fäldt, J., and Bohlmann, J. (2004) Plant Physiol. 135, 1908-1927 6. Peters, R. J., Flory, J. E., Jetter, R., Ravn, M. M., Lee, H. J., Coates, R. M., and Croteau, R. B.

(2000) Biochemistry 39, 15592-15602 7. Ro, D.-K., and Bohlmann, J. (2006) Phytochemistry 67, 1572-1578 8. Hamberger, B., and Bohlmann, J. (2006) Biochem. Soc. Trans. 34, 1209-1214 9. Stofer Vogel, B., Wildung, M. R., Vogel, G., and Croteau, R. (1996) J. Biol. Chem. 271, 23262-

23268 10. Keeling, C. I., Weisshaar, S., Lin, R. P. C., and Bohlmann, J. (2008) Proc. Natl. Acad. Sci. USA

105, 1085-1090 11. Greenhagen, B. T., O'Maille, P. E., Noel, J. P., and Chappell, J. (2006) Proc. Natl. Acad. Sci.

USA 103, 9826-9831 12. Kampranis, S. C., Ioannidis, D., Purvis, A., Mahrez, W., Ninga, E., Katerelos, N. A., Anssour, S.,

Dunwell, J. M., Degenhardt, J., Makris, A. M., Goodenough, P. W., and Johnson, C. B. (2007) Plant Cell 19, 1994-2005

13. Köllner, T. G., Schnee, C., Gershenzon, J., and Degenhardt, J. (2004) Plant Cell 16, 1115-1131 14. Köllner, T. G., O'Maille, P. E., Gatto, N., Boland, W., Gershenzon, J., and Degenhardt, J. (2006)

Arch. Biochem. Biophys. 448, 83-92 15. Yoshikuni, Y., Ferrin, T. E., and Keasling, J. D. (2006) Nature 440, 1078-1082 16. Hyatt, D. C., and Croteau, R. (2005) Arch. Biochem. Biophys. 439, 222-233 17. Peters, R. J., and Croteau, R. B. (2002) Biochemistry 41, 1836-1842 18. Peters, R. J., and Croteau, R. B. (2002) Proc. Natl. Acad. Sci. USA 99, 580-584 19. Zhang, C. L., Ma, Y. G., Sun, C. L., and Qiu, Y. H. (2005) Chin. Chem. Lett. 16, 727-728 20. Gu, Q., Zheng, Y.-H., and Li, Y.-C. (2006) Steroids 71, 96-101 21. Nielsen, M., Lundegaard, C., Lund, O., and Petersen, T. N. (2010) Nucleic Acids Res. 38, W576-

581 22. Köksal, M., Jin, Y., Coates, R. M., Croteau, R., and Christianson, D. W. (2011) Nature 469, 116-

120 23. Krieger, E., Joo, K., Lee, J., Raman, S., Thompson, J., Tyka, M., Baker, D., and Karplus, K.

(2009) Proteins 77 Suppl 9, 114-122 24. Laskowski, R., MacArthur, M., Moss, D., and Thornton, J. (1993) Journal of Applied

Crystallography 26, 283-291 25. Wiederstein, M., and Sippl, M. J. (2007) Nucleic Acids Res. 35, W407-410 26. Holm, L., and Park, J. (2000) Bioinformatics 16, 566-567 27. Thomsen, R., and Christensen, M. H. (2006) J Med Chem 49, 3315-3321 28. Schüttelkopf, A. W., and van Aalten, D. M. (2004) Acta Crystallogr D Biol Crystallogr 60, 1355-

1363 29. Hayashi, K., Kawaide, H., Notomi, M., Sakigi, Y., Matsuo, A., and Nozaki, H. (2006) FEBS Lett

580, 6175-6181 30. Miller, B., Madilao, L. L., Ralph, S., and Bohlmann, J. (2005) Plant Physiol. 137, 369-382 31. Zulak, K. G., Lippert, D. N., Kuzyk, M. A., Domanski, D., Chou, T., Borchers, C. H., and

Bohlmann, J. (2009) Plant J. 60, 1015-1030 32. Yang, N. Y., Liu, L., Tao, W. W., Duan, J. A., and Tian, L. J. (2010) Phytochemistry 71, 1528-

1533 33. Anthonsen, T., and Bergland, G. (1973) Acta Chem. Scand. 27, 1073-1082

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 9: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 9 -

34. Cane, D. E., Chiu, H. T., Liang, P. H., and Anderson, K. S. (1997) Biochemistry 36, 8332-8339 35. Mathis, J. R., Back, K., Starks, C., Noel, J., Poulter, C. D., and Chappell, J. (1997) Biochemistry

36, 8340-8348 36. Kawaide, H., Hayashi, K., Kawanabe, R., Sakigi, Y., and Matsuo, A. (2011) FEBS J 278, 123-

133 37. Leonard, E., Ajikumar, P. K., Thayer, K., Xiao, W. H., Mo, J. D., Tidor, B., Stephanopoulos, G.,

and Prather, K. L. (2010) Proc. Natl. Acad. Sci. USA 107, 13654-13659 38. Jones, C. G., Keeling, C. I., Ghisalberti, E. L., Barbour, E. L., Plummer, J. A., and Bohlmann, J.

(2008) Arch. Biochem. Biophys. 477, 121-130

FOOTNOTES *We thank Karen Reid for excellent laboratory and project management support, Dehai Li, Dept. of Chemistry, UBC, for synthetic advice, Zhicheng (Paul) Xia and Maria Ezhova, Dept. of Chemistry, UBC, for assistance and advice with obtaining and interpreting the NMR data, and Reuben J. Peters, Iowa State University, for helpful discussions. This research was supported by a Discovery Grant to JB from the Natural Sciences and Engineering Research Council of Canada (NSERC), and with funds from Genome British Columbia and the Government of Canada through Genome Canada in support of the Treenomix Conifer Forest Health Project (to JB; www.treenomix.ca) and the Tria Project (to JB and CIK; www.thetriaproject.ca). JB was supported in part by the UBC Distinguished University Scholars program and an NSERC Steacie Memorial Fellowship.

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 10: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 10 -

FIGURE LEGENDS

Fig. 1. Mechanistic scheme for PaLAS and PaIso. The proposed mechanisms of both PaLAS and PaIso begin with the formation of an isopimar-15-en-8-yl carbocation from geranylgeranyl diphosphate. The mechanisms diverge at this intermediate. For PaIso, loss of a proton results in the formation of isopimaradiene (route b). For PaLAS, intramolecular proton abstraction and subsequent Wagner-Meerwein 1,2-methyl shift results in formation of an abieta-8(14)-en-13-yl carbocation (route a). Previously, loss of a proton from this intermediate was thought to immediately give rise to the hydrocarbons abietadiene, levopimaradiene, neoabietadiene, and palustradiene. However, the data presented in the present paper suggest that the abieta-8(14)-en-13-yl carbocation is quenched by water to form 13-hydroxy-8(14)-abietene, a tertiary allylic alcohol. The apparent products abietadiene, levopimaradiene, neoabietadiene, and palustradiene previously reported are consequently the result of thermally-induced dehydration of the 13-hydroxy-8(14)-abietene. Fig. 2. GC-MS chromatogram and mass spectra of assay products from PaLAS. (A) GC-MS chromatogram of PaLAS assay products on a clean GC-MS system with an HP5ms column. TIC, total ion chromatogram; 1, palustradiene; 2, levopimaradiene; 3, dehydroabietadiene; 4, abietadiene; 5, neoabietadiene; 6 and 7, diterpenol products. (B) Mass spectrum of the most abundant diterpenol (peak 7). The mass spectrum of peak 6 was identical. The distinctive fragment of m/z 247 could not have arisen from a molecular ion of 272. (C) Mass spectrum of abietadiene (peak 4). Fig. 3. GC-MS chromatogram on an HP5ms column of PaLAS enzyme assay products with a split/splitless injector after derivatization with bis-trimethylsilyltrifluoroacetimide. Compounds are numbered the same as in Fig. 2, and also 8, palmitic acid-TMS; 9, TMS derivative of one diterpenol; 10, steric acid-TMS; 11, TMS derivative of the other diterpenol. Inset, mass spectrum of peak 9. The absence of the two diterpenol peaks shown in Fig, 2 (peaks 6 and 7) and the presence of two new peaks upon derivatization (peaks 9 and 11), and the mass spectra of these derivatives, were consistent with diterpenol assay products with a molecular weight of 290. Fig. 4. GC-MS analysis on a DB-WAX column of PaLAS enzyme assay products on split/splitless and cold on-column injectors. (A) GC-MS total ion current chromatograms with split/splitless and cold on-column injectors. Compounds are numbered the same as in Fig. 2; *, phthalate contaminant. With a split/splitless injector at 240°C, the previously described diterpene hydrocarbon products (peaks 1 – 5) were observed, but with a cold on-column injector starting at 40°C and increasing with the oven temperature, these peaks decreased dramatically and two later-eluting peaks (peaks 6 and 7) became more apparent. In addition, a baseline hump was observed, indicated by the dashed line. The mass spectrum of the baseline hump was nearly identical to abietadiene, suggesting that dehydration of the postulated diterpenol products was also occurring within the column. (B) GC-CI-MS (CH4 reagent gas) chromatogram with the cold on-column injector and a lower maximum oven temperature. These chromatograms illustrate the effect of injector and oven temperature on the thermal dehydration of the postulated diterpenol products. Fig. 5. GC-MS chromatograms on an HP5ms column of fractions of the combined assay products of PaLAS and PaIso passed through a silica-filled Pasteur pipette column, and the PaLAS products prior to separation on the silica column. Compounds are numbered the same as in Fig. 2. Peak 12, isopimaradiene, is the product of PaIso. The presence of palustradiene, levopimaradiene, abietadiene, and neoabietadiene in the first diethyl ether fraction, and their absence in the early pentane fractions where isopimaradiene eluted, suggested that these diterpene hydrocarbons were not the compounds passing through the silica column but were rather decomposition products upon GC-MS analysis of a more polar compound that eluted in the diethyl ether fractions.

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 11: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 11 -

Fig. 6. Normal-phase LC-APCI-MS (positive mode) of PaLAS assay product and related authentic standards for comparison. RIC, reconstructed ion chromatogram, for each m/z as indicated. The elution of the PaLAS assay products was consistent with a relatively polar compound, not hydrocarbons such as abietadiene that elute much earlier. The base peak of m/z 273 for the PaLAS product suggested that dehydration occurred due to the high temperature of the APCI interface. Fig. 7. Observed NOE interactions. Dotted lines indicate weak interactions. The NOE interactions supported the diterpenol structure and weakly supported the β-hydroxy epimer as the most abundant epimer.

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 12: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 12 -

Table 1: NMR assignments for the major product of PaLAS 1H-NMR assignments were based upon 1H-NMR, 1H-1H-COSY, HMBC, HSQC, and NOE in benzene-d6. 13C-NMR assignments were estimated from HMBC and HSQC, not from 13C-NMR directly. Numbering is based upon Fig. 1. Proton 1H (ppm) Multiplicity (Hz) 13C (ppm) 1α 0.87 t (7.2)

39.5 1β 1.55 m 2α 1.35-1.54 m 19.5 2b 1.35-1.54 m 3α 1.14 m

43.0 3β 1.38 m 4 — — 33.5 5 0.92 m 55.5 6α 0.92 m

23.0 6β 1.26 m 7α 1.99 td (13.5,5.4)

36.5 7β 2.22 ddd (13.7,4.3,2.4) 8 — — 125.5 9 1.56 m 51.0 10 — — 39.0 11α 1.22 m

23.2 11β 1.52 m 12α 1.25 m

33.4 12β 1.87 dddd (12.6,6.0,3.3,1.2) 13 — — 72.5 14 5.47 s 129.7 15 1.79 hept (6.6) 36.4 16 1.00 d (6.6) 17.5 17 1.10 d (7.2) 17.3 18 0.82 s 22.5 19 0.86 s 34.1 20 0.72 s 15.3

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 13: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 13 -

Figure 1

H

Wagner-Meerwein1,2-methyl shift

H

HO

-OPP-

13-hydroxy-8(14)-abietene

abieta-8(14)-en-13-yl+

isopimar-15-en-8-yl+

H

H

isopimar-8(14)-en-15-yl+

(E,E,E)-geranylgeranyl diphosphate OPP

H

(+)-copalyl diphosphate OPP

(–)-abietadiene (–)-levopimaradiene (–)-neoabietadiene (–)-palustradiene

-H2O

-H+ +H2O

H+

+

+

+

ab

ab

(–)-isopimaradiene-H+

-H+

PaLAS

PaIso

5

12

3

19 18

46

7

814

17

16

1520 13

11

109

12

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 14: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 14 -

Figure 2

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 15: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 15 -

Figure 3

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 16: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 16 -

Figure 4

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 17: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 17 -

Figure 5

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 18: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 18 -

Figure 6

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 19: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

- 19 -

Figure 7

MeMe

Me

H

OH

H

Me

Me

HH

H

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from

Page 20: THE PRIMARY PRODUCTS OF THE NORWAY SPRUCE DITERPENE ... · 25-04-2011  · similarity of PaLAS and PaIso with a rmsd of 0.7 Å between all Cα atoms. Molegro Virtual Docker 2010.4.0.0

BohlmannChristopher I. Keeling, Lina L. Madilao, Philipp Zerbe, Harpreet K. Dullat and Joerg

a thermally unstable diterpenolThe primary products of the Norway spruce diterpene synthase PaLAS are epimers of

published online April 25, 2011J. Biol. Chem. 

  10.1074/jbc.M111.245951Access the most updated version of this article at doi:

 Alerts:

  When a correction for this article is posted• 

When this article is cited• 

to choose from all of JBC's e-mail alertsClick here

by guest on Decem

ber 14, 2020http://w

ww

.jbc.org/D

ownloaded from