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4/28/2014 1 Covert skill learning in a cortical- basal ganglia circuit Charlesworth, J.D., Warren, T.L., & Brainard, M.S. (2012). Covert skill learning in a cortical-basal ganglia circuit. Nature 486, 251-255. doi: 10.1038/nature11078 BIONB 4110 April 28, 2014 Presented by: Jennifer Hoots and Professor Carl Hopkins The Scope of This Talk Journal Institution Authors Background Figures Their Conclusions Further Thoughts The Journal Nature Published weekly Impact factor 38.597 Interdisciplinary International Peer-reviewed The Institution University of California San Francisco W. M. Keck Center for Integrative Neuroscience Department of Physiology Neuroscience Graduate Program The Authors Jonathan D. Charlesworth Studied molecular biology as an undergraduate at Princeton University ‘07 PhD in neuroscience at University of California San Francisco ’12 Postdoc at Neurotek (now thync) Current senior scientist at thync Performed the experiments with APV in RA Analyzed the data Jonathan Charlesworth. Retrieved from: http://blogs.princeton.edu/pa w/2012/05/tiger-of-the-we- 115/ The Authors Timothy L. Warren Performed the experiments with LMAN inactivations Studied at Harvard as an undergraduate UCSF graduate student at the time Timothy L. Warren. Retrieved from: http://keck.ucsf.edu/~twarren/

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Page 1: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

4/28/2014

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Covert skill learning in a cortical-basal ganglia circuit

Charlesworth, J.D., Warren, T.L., & Brainard, M.S. (2012). Covert skill learning in a cortical-basal ganglia circuit. Nature 486, 251-255. doi: 10.1038/nature11078

BIONB 4110

April 28, 2014

Presented by: Jennifer Hoots and Professor Carl Hopkins

The Scope of This Talk

Journal

Institution

Authors

Background

Figures

Their Conclusions

Further Thoughts

The Journal

Nature

Published weekly

Impact factor 38.597

Interdisciplinary

International

Peer-reviewed

The Institution

University of California San Francisco

W. M. Keck Center for Integrative Neuroscience

Department of Physiology

Neuroscience Graduate Program

The Authors

Jonathan D. Charlesworth

Studied molecular biology as an undergraduate at Princeton University ‘07

PhD in neuroscience at University of California San Francisco ’12

Postdoc at Neurotek (now thync)

Current senior scientist at thync

Performed the experiments with APV in RA

Analyzed the dataJonathan Charlesworth.

Retrieved from:

http://blogs.princeton.edu/pa

w/2012/05/tiger-of-the-we-

115/

The Authors

Timothy L. Warren

Performed the experiments with LMAN inactivations

Studied at Harvard

as an undergraduate

UCSF graduate student

at the time

Timothy L. Warren. Retrieved from: http://keck.ucsf.edu/~twarren/

Page 2: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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The Authors

Michael S. Brainard

Principal Investigator at University of California, San Francisco

Howard Hughes Medical Institute professor

Also a professor of physiology and psychiatry

BS, biochemistry at Harvard University

PhD, neurobiology, Stanford University

Howard Hughes Medical Institute (2014).

Retrieved from:

http://www.hhmi.org/scientists/michael-

brainard

In the "actor-critic" models of reinforcement learning three events must occur for learning to occur. What are

these three events and how do they influence learning?

“Actor/Critic Models of Reinforcement Learning”

Reinforcement learning or “trial and error” learning was first characterized in Thorndike’s (1911) “Law of Effect” which states that a random action that produces a satisfying effect is more likely to occur again in that same situation.

Thorndike, Edward Lee (1911) Animal Intelligence. Macmillan, New York, 297 pp.

“Actor/Critic Models of Reinforcement Learning”

Reinforcement learning or “trial and error” learning was first characterized by Thorndike’s (1911) “Law of Effect”. This states that a random action that produces a satisfying effect is more likely to occur again in that same situation.

The three conditions for reinforcement learning are: 1) The situation (context, state, timing).2) The action (what the animal or “actor” did – a motor act, a plan or a thought).3) The rewardThus: If, in a given situation, after a given action, a reward occurs (i.e. a satisfying effect or a sense of comfort), then the action will be more likely to occur again in that same situation. By contrast, if in a given situation a negative reward (i.e. one that produces discomfort or dissatisfaction) will be less likely in the same context.

Reward, which can either be positive or negative is input from the “critic”.Therefore: If an Action occurs in a given context, followed by a critic, the action will be repeated or not repeated.

Thorndike, Edward Lee (1911) Animal Intelligence. Macmillan, New York, 297 pp.

The authors use birdsong as an example of learned behavior. What is the evidence that birds actually learn

their songs?

The authors use birdsong as an example of learned behavior. What is the evidence that birds actually learn

their songs?1) P. Marler and W. Thorpe working in Cambridge England in 1950’s discovered that Chaffinches

sang only 2 songs as adults, but that the songs were different from one geographic area to another

(dialects).

2) To prove that the birds were learning their songs, they raised birds in acoustic isolation.

3) If tutored with a sound from a tape recorder, the isolate bird will copy the tutor song as an adult. If

presented with a different dialect copied the tutor’s song, not their own native dialect.

4) White crown sparrow in California (P. Marler) had similar geographic dialects, and similar learning

rules.

5) Birds who are deafened before they learn to sing will sing an abbarent song, if deafened after they

have learned to sing the deafening has no effect.

6) Male birds often sing exactly the same song as their father’s song. There is a lot of variation in the

songs within a species, but sons will often replicate the exact same syllables that their father sang.

Page 3: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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Zebra Finch (Taeniopygia guttata)

Native to deserts of Australia. Huge flocks, migratory.

Neuroanatomy of song productionThe brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm

(silver degeneration techniques).

LMAN is essential for song learning but not for song production

SCIENCE (1984) p. 901-

903

Abnormal song after LMAN lesion Normal song after control lesion to

forebrain

Page 4: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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Brainard and Doupe (2000) develop error model for song learning

Alexay A. Kozhevnikov , Michale

S. Fee

(2007) Singing-Related Activity of

Identified HVC Neurons in the

Zebra Finch. Journal of

Neurophysiology. Vol. 97no. 4271-

4283.

Recording of single identified units in HVC

recorded during bouts of natural singing

showed three different but stereotyped

patterns of firing with respect to the vocal

output. Single units were identified by anti-

dromic stimulation of X, and RA.

1) Units that projected to area X in the

Anterior Forebrain Nucleus fire in bursts

of one to four times per motif.

2) Units projecting to RA fire very rarely --

phase locked to no more than one

syllable per motif. This is a sparse code

for one piece of the song.

3) Interneurons within HVC fir throughout

the song with tonic firing.

Simplified model for how the brain controls a complex, learned

vocalization.

1) Neurons in HVC fire in sparse code, one neuron per syllable. Each neuron connects to the next neuron in the timing chain.

2) HVC neurons send output to one or more RA neurons. RA neurons fire at syllable-specific times in the song. RA codes for individual muscle contractions within the song.

3) Each syllable is composed of a complex of muscle contractions linked to the active units in RA.

Anthony Leonardo and Michale S. Fee (2005) J.Neurosci.

Purpose & Hypothesis

Purpose: To further resolve the function of cortical-basal ganglia circuits in trial and error skill learning.

“…learning requires the reinforcement of exploratory behavioural variation generated by the AFP; therefore, preventing the AFP from contributing to behavioural variation during training should prevent trial-and-error learning.”

Study Organism

Bengalese finches (Lonchura striata domestica)

Adult males (more than 120 days old)

Housed in sound-attenuating

chambers

All recorded songs were

undirected (no female present)

Beckham, R. (2013) Society Finch - Lonchura

striata domestica. efinch.com. Retrieved from::

http://www.efinch.com/species/society.htm

Training

Tumer, E.C. & Brainard, M.S. (2007) Performance variability enables adaptive plasticity of “crystallized” adult birdsong. Nature. doi: 10.1038/nature06390

There is trial-by-trial variation in stable adult song

A computerized system monitors pitch variation and delivers real-time auditory disruption to a subset of those variations

Birds adjust their song to avoid the disruption

Threshold for avoiding white noise was set at about the baseline median FF performance

White noise was delivered for 4-14 hrs while birds were awake

Page 5: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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Figure 1 (a & b)

Tumer, E.C. & Brainard, M.S. (2007) Performance variability enables

adaptive plasticity of “crystallized” adult birdsong. Nature. doi:

10.1038/nature06390

Figure 1 (c-g)

Use APV to block LMAN

Figure 2 (a)

APV infusion

Brainard, M.S., & Doupe, A.J. (2000) Auditory feedback in

learning and maintenance of vocal behaviour. Nature

Reviews Neuroscience 1, 31-40. doi: 10.1038/35036205

APV Injection

Reverse microdialysis technique diffuses the solution into the brain area (RA) across the membrane of the implanted probe

48 hrs of ACSF was dialysed

NMDAR antagonist DL-APV (DL-2-Amino-5-phosphonopentanoic acid) was dialysed for at least 1.5 hrs before white noise training

Switched solution back to ACSF and prevented birds from singing for at least 1.5 hrs to allow washout before recording first song recording after training

Sigma-Aldrich Co. LLC. (2014). Retrieved

from:

http://www.sigmaaldrich.com/catalog/product/si

gma/a5282?lang=en&region=US

Figure 2 (b & c)

Page 6: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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Figure 3 (a & b) Figure 3 (c & d)

Figure 3 (e & f) Figure 4 (a)

Muscimol (GABAA

agonist) or lidocaine (Na+

channel blocker)

Brainard, M.S., & Doupe, A.J. (2000) Auditory feedback in

learning and maintenance of vocal behaviour. Nature

Reviews Neuroscience 1, 31-40. doi: 10.1038/35036205

Figure 4 (b-c) Their Conclusions

“Our results motivate a revision to models of song plasticity10–12

and influential actor–critic models of skill learning2,3, which propose that essential learning-related signals develop only in brain regions that are ‘acting’ (that is, controlling behaviour).”

10. Fee, M.S. & Goldberg, J.H. A hypothesis for basal ganglia-dependent reinforcement learning in the songbird. Neuroscience 198, 152-170 (2011).

11. Fiete, I.R., Fee, M.S. & Seung H.S. Model of birdsong learning based on gradient estimation by dynamic perturbation of neural conductances. J. Neurophysiol. 98, 2038-2057 (2007).

Page 7: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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Their Conclusions

Learning can happen in the AFP even when it is not acting

Variation generated by the AFP is not necessary for learning

A different source of variation can be exploited for reinforcement learning

Possibly variation in the RA

Information about variation may converge at the AFP and be associated with reinforcement signals

Supplementary Figure 1

1. Efference copy of motor command to AFP

2. Efference copy and reinforcement signals converge allowing the AFP to

identify successful motor commands

3. When AFP output is unblocked, functional connections between the AFP

and motor pathway allow the AFP to implement more successful motor

commands

Discussion Questions

The authors refer to "covert skill learning" in their paper. Why exactly do

they say the learning is covert?

Discussion Questions

Suppose that APV does not eliminate all connections between the anterior

forebrain pathway and nucleus RA (primary motor cortex),. but merely

reduces or blocks some of the connections? What could you conclude about

covert learning if this were the case?

Using the Brainard method of experimentally driving learning, Andalman and Fee (2009) were able to cause shifts in FF of zebra finch syllables.

Methods: the sound is recorded with a microphone attached to

the skull and feedback is provided through a speaker delivering

sound to the cranial air-sac. A basal ganglia-forebrain circuit in

the songbird

biases motor output to avoid vocal errors

Aaron S. Andalman and Michale S. Fee1

A basal ganglia-forebrain circuit in the songbird biases motor output to avoid vocal errors Aaron S. Andalman and Michale S. Fee PNAS. July 28, 2009 vol. 106 no. 30.

Pitch up pitch down days

Frequency of one syllable

However, when the Anterior Forebrain Pathway is knocked out by inserting bilateral cannulae

into LMAN for TTX infusion the induced learning is completely abolished. (TTX is

compared to CSF infusion as control)

This result suggests that LMAN provides a corrective pre-motor bias to the song frequency causing up and down shifts in frequency of the song. This bias is completely abolished by TTX

infusion into LMAN.

Page 8: The Scope of This Talk - Cornell University · The brain areas involved in song production were established by tract-tracing studies done in the 1970’s by Fernando Nottebohm (silver

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