the wrky superfamily of plant transcription factors

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The WRKY superfamily of plant The WRKY superfamily of plant transcription factors transcription factors

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Page 1: The WRKY superfamily of plant transcription factors

The WRKY superfamily of plantThe WRKY superfamily of planttranscription factorstranscription factors

Page 2: The WRKY superfamily of plant transcription factors

 Introduction

Wrky

▶ WRKY (pronounced‘worky’) proteins, a large family of transcriptional regulators that has to date only been found in plants.

▶ The WRKY domain is defined by the conserved amino acidsequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif

▶ Many WRKY proteins having a regulatory function in the response to pathogen infection and other stresses.

▶ levels of WRKY mRNA, protein and DNA-binding activity havebeen reported to be induced by infection with viruses oomycetes fungal elicitors9 Signaling substances such as salicylic acid

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▶ Comparative expression studies with several AtWRKY genes also suggest that certain family members have a role in the regulation of senescence.

▶ Transcript levels of AtWRKY4, 6, 7 and 11 are enhanced in senescent leaves.

▶ W boxes have been described as positive cis-acting elements upregulating transcription.

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1.group I : two WRKY domains group II: one WRKY domains group III: newly define group

2.(Pc)sweet potato (Ib), Arabidopsis (At), tobacco (Nt), cucumber (Cs) and wild oat (Af ).

WRKY domains are blacknuclear localization signals are blue leucine zippers are pink serine–threonine-rich regions are yellowyellow glutamine-rich regions are purple proline-rich regions are green acidic regions are red

Fig. Phylogenetic analysis of 58 members of the AtWRKY family.

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  Results

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Targets of AtWRKY6 regulation during plant senescence and pathogen defense

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ABSTRACT In Arabidopsis, ▶ WRKY factors large gene family of plant-specific transcriptional regulators controlling several types of plant stress responses.

▶ we identified targets of the senescence- and defense-associated WRKY6 factor.

▶ WRKY6 was found to suppress its own promoter activity, indicating negative autoregulation.

▶ WRKY6 positively influenced the senescence- and pathogen defense- associated PR1 promoter activity, most likely involving NPR1 function.

▶ One novel identified target gene, SIRK, encodes a receptor-like protein kinase, whose developmental expression is strongly induced specifically during leaf senescence. SIRK is dependent on WRKY6 function.

▶ Senescing leaves of wrky6 knockout mutants showed a drastic reduction, green leaves of WRKY6 overexpression lines showed clearly elevated SIRK

▶ The SIRK gene promoter was activated by WRKY6 in vivo

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Page 9: The WRKY superfamily of plant transcription factors

The Plant Journal

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En-1 transposon insertion

Figure 1.   Identification of wrky6 knockout mutants

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Figure 2.   WRKY6 overexpression lines.

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The Plant Journal

SAG:salicyilcacid glucoside

ELI:plant defence-Related gene

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The Plant Journal

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Figure 3.   Repressor activity of WRKY6.

promotor GUS

promotor WRKY Knock out gene

Knock out

promotor GUS

promotor WRKY overexpression

overexepression

Page 15: The WRKY superfamily of plant transcription factors

Rhizobacterium

JA response

Ethylene response

Pathogen

SA JA responseNahG ethylene response

NPRnpr1

etr1

PDF1.2PRSDefensive compounds

ISR SAR

jar1

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The Plant Journal

Figure . Nuclear localization of endogenous AtWRKY6.

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The Plant Journal

  Figure 4.   Effect of WRKY6 overexpression on PR1 and NPR1.

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Table 1.   cDNA-AFLP fragments and homologies to sequences in the Arabidopsis database

R:root transcripts.R1-R154P:aerieal part transcripts P1-P63

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Figure 5.   Dependence of SIRK gene expression on WRKY6

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Figure 6.   Specificity of the WRKY6-SIRK promoter interaction

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NecroticPathogeninfection

Systemic signal

SA NPR1 SARGeneexpression

EnhancedPathogenresistance

WRKY6?

SIRK