today house keeping –rt-pcr result –final report (manuscript style) c-value paradox.ppt...
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![Page 1: Today House Keeping –RT-PCR result –Final report (manuscript style) C-value paradox.ppt Phylogeny, COI: snail species ID-ed fungal sequences](https://reader035.vdocuments.net/reader035/viewer/2022062315/5697c02b1a28abf838cd8563/html5/thumbnails/1.jpg)
Today
• House Keeping–RT-PCR result–Final report (manuscript style)
• C-value paradox.ppt
• Phylogeny, COI: snail species ID-ed
• fungal sequences
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RT-PCT results
snail 1 2 3 6 6 7 8 9 9
LBP/BPI
PhysalysinPGRP
eIF2
group 1 2 3 5 6 7 8 9 10ho
usek
eepi
ngE
xper
imen
tal
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PARASITES AND SNAILPARASITES AND SNAIL BIOLOGY BIOLOGY
“identity, possibilities”phylogenetics
“intentions”transcriptomics
PCRrDNA/mito
BioanalyzerDNA-free,
direct sequencing
gel electrophoresisnanodrop spec
Sequence ID (BLAST)editing
Phylogenetics
electrophoresisRT-PCR
gel
CTAB
Trizol
TA cloning, B/W screening
M13 sequencing
Primer design, walking
Qiagen plasmid extraction Restriction digests
DNA
RNA
GenBank submission
+Sevilleta snails
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Radix swinhoei?
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C-value paradox.ppt
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Physid snail species identification
Physella acuta
Based on alignmentof experimentally obtainedpartial COI encoding sequenceswith sequences from popset 164430598For phylogenetic tree construction using parsimony
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Majority Rule
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Majority Rule Extended
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Majority Rule Extended
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Majority Rule Extended
Majority Rule