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GEOCHEMISTRY ARTICLES – January 2020

Analytical Chemistry

Aparecida Silva Almeida, C., Regina Baggio, S., Regina Barros Mariutti, L., Bragagnolo, N., 2020. One-step rapid extraction of phytosterols from vegetable oils. Food Research International 130, 108891.

Bastviken, D., Nygren, J., Schenk, J., Parellada Massana, R., Duc, N.T., 2020. Technical note: Facilitating the use of low-cost methane (CH4) sensors in flux chambers – calibration, data processing, and an open source make-it-yourself logger. Biogeosciences Discussions 2020, 1-16.

Bian, X., Wang, K., Tan, E., Diwu, P., Zhang, F., Guo, Y., 2020. A selective ensemble preprocessing strategy for near-infrared spectral quantitative analysis of complex samples. Chemometrics and Intelligent Laboratory Systems 197, 103916.

Bolotnik, T.A., Timchenko, Y.V., Plyushchenko, I.V., Levkina, V.V., Pirogov, A.V., Smolenkov, A.D., Popik, M.V., Shpigun, O.A., 2019. Use of chemometric methods of data analysis for the identification and typification of petroleum and petroleum products. Journal of Analytical Chemistry 74, 1336-1340.

Culka, A., Košek, F., Oren, A., Mana, L., Jehlička, J., 2019. Detection of carotenoids of halophilic prokaryotes in solid inclusions inside laboratory-grown chloride and sulfate crystals using a portable Raman spectrometer: applications for Mars exploration. FEMS Microbiology Letters 366, fnz239.

Elsayed, M., Mahmoud, M., El-Husseiny, A., Kamal, M.S., Al-Garadi, K., 2019. A new method to evaluate reaction kinetics of acids with carbonate rocks using NMR diffusion measurements. Energy & Fuels 34, 787-797.

Fan, M., Andrade, G.F.S., Brolo, A.G., 2020. A review on recent advances in the applications of surface-enhanced Raman scattering in analytical chemistry. Analytica Chimica Acta 1097, 1-29.

Hansen, F.A., Pedersen-Bjergaard, S., 2020. Emerging extraction strategies in analytical chemistry. Analytical Chemistry 92, 2-15.

Langer, J., Jimenez de Aberasturi, D., Aizpurua, J., Alvarez-Puebla, R.A., Auguié, B., Baumberg, J.J., Bazan, G.C., Bell, S.E.J., Boisen, A., Brolo, A.G., Choo, J., Cialla-May, D., Deckert, V., Fabris, L., Faulds, K., García de Abajo, F.J., Goodacre, R., Graham, D., Haes, A.J., Haynes, C.L., Huck, C., Itoh, T., Käll, M., Kneipp, J., Kotov, N.A., Kuang, H., Le Ru, E.C., Lee, H.K., Li, J.-F., Ling, X.Y., Maier, S.A., Mayerhöfer, T., Moskovits, M., Murakoshi, K., Nam, J.-M., Nie, S., Ozaki, Y., Pastoriza-Santos, I., Perez-Juste, J., Popp, J., Pucci, A., Reich, S., Ren, B., Schatz, G.C., Shegai, T., Schlücker, S., Tay, L.-L., Thomas, K.G., Tian, Z.-Q., Van Duyne, R.P., Vo-Dinh, T., Wang, Y., Willets, K.A., Xu, C., Xu, H., Xu, Y., Yamamoto, Y.S., Zhao, B., Liz-Marzán, L.M., 2020. Present and future of surface-enhanced Raman scattering. ACS Nano 14, 28-117.

Moro, M.K., Neto, Á.C., Lacerda, V., Romão, W., Chinelatto, L.S., Castro, E.V.R., Filgueiras, P.R., 2020. FTIR, 1H and 13C NMR data fusion to predict crude oils properties. Fuel 263, 116721.

Pichon, V., Delaunay, N., Combès, A., 2020. Sample preparation using molecularly imprinted polymers. Analytical Chemistry 92, 16-33.

Richardson, S.D., Kimura, S.Y., 2020. Water analysis: Emerging contaminants and current issues. Analytical Chemistry 92, 473-505.

Sakamoto, T., Qiu, Z., Inagaki, M., Fujimoto, K., 2020. Simultaneous amino acid analysis based on 19F NMR using a modified OPA-derivatization method. Analytical Chemistry 92, 1669-1673.

Xia, L., Yang, J., Su, R., Zhou, W., Zhang, Y., Zhong, Y., Huang, S., Chen, Y., Li, G., 2020. Recent progress in fast sample preparation techniques. Analytical Chemistry 92, 34-48.

Xu, L., Huang, S., Liu, Y., Wei, S., Chen, G., Gong, Z., Ouyang, G., 2020. Hollow carbon nanobubbles-coated solid-phase microextraction fibers for the sensitive detection of organic pollutants. Analytica Chimica Acta 1097, 85-93.

Zhang, P., Lu, S., Li, J., Chang, X., 2020. 1D and 2D Nuclear magnetic resonance (NMR) relaxation behaviors of protons in clay, kerogen and oil-bearing shale rocks. Marine and Petroleum Geology 114, 104210.

Gas Chromatography/GC×GC/GC-MS

Amaral, M.S.S., Nolvachai, Y., Marriott, P.J., 2020. Comprehensive two-dimensional gas chromatography advances in technology and applications - biennial update. Analytical Chemistry 92, 85-104.

Chiu, H.-H., Kuo, C.-H., 2020. Gas chromatography-mass spectrometry-based analytical strategies for fatty acid analysis in biological samples. Journal of Food and Drug Analysis 28, 60-73.

Crucello, J., Pierone, D.V., Hantao, L.W., 2020. Simple and cost-effective determination of polychlorinated biphenyls in insulating oils using an ionic liquid-based stationary phase and flow modulated comprehensive two-dimensional gas chromatography with electron capture detection. Journal of Chromatography A 1610, 460530.

Hashemi-Nasab, F.S., Parastar, H., 2020. Pattern recognition analysis of gas chromatographic and infrared spectroscopic fingerprints of crude oil for source identification. Microchemical Journal 153, 104326.

Li, Y., Pang, T., Shi, J., Deng, X., Kong, G., Lu, X., 2020. Conversion method for linear retention indices in gas chromatography acquired using n-alkanes and n-fatty acid methyl esters. Chinese Journal of Chromatography 38, 244-249.

Liao, P.-H., Yang, H.-H., Wu, P.-C., Abu Bakar, N.H., Urban, P.L., 2020. On-line coupling of simultaneous distillation–extraction using the Likens–Nickerson apparatus with gas chromatography. Analytical Chemistry 92, 1228-1235.

Nunes, V.O., Silva, R.V.S., Romeiro, G.A., Azevedo, D.A., 2020. The speciation of the organic compounds of slow pyrolysis bio-oils from Brazilian tropical seed cake fruits using high-resolution techniques: GC × GC-TOFMS and ESI(±)-Orbitrap HRMS. Microchemical Journal 153, 104514.

Schena, T., Lazzari, E., Primaz, C., Canielas Krause, L., Machado, M.E., Bastos Caramão, E., 2020. Upgrading of coconut fibers bio-oil: An investigation by GC×GC/TOFMS. Journal of Environmental Chemical Engineering 8, 103662.

Sojinu, O.S., 2020. Preliminary evaluation of bitumen contamination in environmental samples using comprehensive gas chromatography GC×GC – Time of flight mass spectrometry (GC×GC-TOFMS). Environmental Forensics 21, 79-86.

van Mourik, L.M., Lava, R., O'Brien, J., Leonards, P.E.G., de Boer, J., Ricci, M., 2020. The underlying challenges that arise when analysing short-chain chlorinated paraffins in environmental matrices. Journal of Chromatography A 1610, 460550.

Xie, S.-M., Chen, X.-X., Zhang, J.-H., Yuan, L.-M., 2020. Gas chromatographic separation of enantiomers on novel chiral stationary phases. TrAC Trends in Analytical Chemistry 124, 115808.

Imaging: AFM

Müller, H., Marozava, S., Probst, A.J., Meckenstock, R.U., 2020. Groundwater cable bacteria conserve energy by sulfur disproportionation. The ISME Journal 14, 623-634.

Yamada, Y., Guillemette, R., Baudoux, A.-C., Patel, N., Azam, F., 2020. Viral attachment to biotic and abiotic surfaces in seawater. Applied and Environmental Microbiology 86, e01687-01619.

Imaging: SEM, TEM, HIM

Akhondzadeh, H., Keshavarz, A., Al-Yaseri, A.Z., Ali, M., Awan, F.U.R., Wang, X., Yang, Y., Iglauer, S., Lebedev, M., 2020. Pore-scale analysis of coal cleat network evolution through liquid nitrogen treatment: A Micro-Computed Tomography investigation. International Journal of Coal Geology 219, 103370.

Balfourier, A., Luciani, N., Wang, G., Lelong, G., Ersen, O., Khelfa, A., Alloyeau, D., Gazeau, F., Carn, F., 2020. Unexpected intracellular biodegradation and recrystallization of gold nanoparticles. Proceedings of the National Academy of Sciences 117, 103-113.

Bonneville, S., Delpomdor, F., Préat, A., Chevalier, C., Araki, T., Kazemian, M., Steele, A., Schreiber, A., Wirth, R., Benning, L.G., 2020. Molecular identification of fungi microfossils in a Neoproterozoic shale rock. Science Advances 6, eaax7599.

Cui, L., Liu, W., Zhang, X., 2020. Phosphatized microbial fossils from the lowest Cambrian of South China and their ecological and environmental implications for the Kuanchuanpu biota. Precambrian Research 338, 105560.

Fu, Y., Chen, Z., Zhou, S., Wei, S., 2020. Comparative study of the materials and lacquering techniques of the lacquer objects from Warring States Period China. Journal of Archaeological Science 114, 105060.

Goodman, A., Sanguinito, S., Kutchko, B., Natesakhawat, S., Cvetic, P., Allen, A.J., 2020. Shale pore alteration: Potential implications for hydrocarbon extraction and CO2 storage. Fuel 265, 116930.

Goral, J., Panja, P., Deo, M., Andrew, M., Linden, S., Schwarz, J.-O., Wiegmann, A., 2020. Confinement effect on porosity and permeability of shales. Scientific Reports 10, 49.

Hackley, P.C., Araujo, C.V., Borrego, A.G., Bouzinos, A., Cardott, B.J., Carvajal-Ortiz, H., López Cely, M.R., Chabalala, V., Crosdale, P.J., Demchuk, T.D., Eble, C.F., Flores, D., Furmann, A., Gentzis, T., Gonçalves, P.A., Guvad, C., Hámor-Vidó, M., Jelonek, I., Johnston, M.N., Juliao-Lemus, T., Kalaitzidis, S., Knowles, W.R., Kus, J., Li, Z., Macleod, G., Mastalerz, M., Menezes, T.R., Ocubalidet, S., Orban, R., Pickel, W., Ranasinghe, P., Ribeiro, J., Gómez Rojas, O.P., Ruiz-Monroy, R., Schmidt, J.S., Seyedolali, A., Siavalas, G., Suarez-Ruiz, I., Vargas, C.V., Valentine, B.J., Wagner, N., Wrolson, B., Jaramillo Zapata, J.E., 2020. Testing reproducibility of vitrinite and solid bitumen reflectance measurements in North American unconventional source-rock reservoir petroleum systems. Marine and Petroleum Geology 114, 104172.

Han, H., Pang, P., Zhong, N., Luo, Q., Ma, Y., Gao, Y., 2020. The pore characteristics and gas potential of the Jurassic continental shales in the middle-small basins, northwest China. Journal of Petroleum Science and Engineering 188, 106873.

Hand, E., 2020. Cheap shots. Science 367, 354-358.

Hou, H., Shao, L., Tang, Y., Zhao, S., Yuan, Y., Li, Y., Mu, G., Zhou, Y., Liang, G., Zhang, J., 2020. Quantitative characterization of low-rank coal reservoirs in the southern Junggar Basin, NW China: Implications for pore structure evolution around the first coalification jump. Marine and Petroleum Geology 113, 104165.

Jacquemot, P., Viennet, J.-C., Bernard, S., Le Guillou, C., Rigaud, B., Delbes, L., Georgelin, T., Jaber, M., 2019. The degradation of organic compounds impacts the crystallization of clay minerals and vice versa. Scientific Reports 9, 20251.

Kato, K., Shinoda, T., Nagao, R., Akimoto, S., Suzuki, T., Dohmae, N., Chen, M., Allakhverdiev, S.I., Shen, J.-R., Akita, F., Miyazaki, N., Tomo, T., 2020. Structural basis for the adaptation and function of chlorophyll f in photosystem I. Nature Communications 11, 238.

Khan, I., Zhong, N., Luo, Q., Ai, J., Yao, L., Luo, P., 2020. Maceral composition and origin of organic matter input in Neoproterozoic–Lower Cambrian organic-rich shales of Salt Range Formation, upper Indus Basin, Pakistan. International Journal of Coal Geology 217, 103319.

Kutchko, B., Sanguinito, S., Natesakhawat, S., Cvetic, P., Culp, J.T., Goodman, A., 2020. Quantifying pore scale and matrix interactions of SCCO2 with the Marcellus shale. Fuel 266, 116928.

Lin, K., Huang, X., Zhao, Y.-P., 2019. Combining image recognition and simulation to reproduce the adsorption/desorption behaviors of shale gas. Energy & Fuels 34, 258-269.

Lin, X., Huang, M., Chen, H., Wang, J., Wang, R., 2019. Influence of different polar solvent extraction on pore structure in shale. Acta Petrolei Sinica 40, 1485-1494.

Liu, X., Lai, J., Fan, X., Shu, H., Wang, G., Ma, X., Liu, M., Guan, M., Luo, Y., 2020. Insights in the pore structure, fluid mobility and oiliness in oil shales of Paleogene Funing Formation in Subei Basin, China. Marine and Petroleum Geology 114, 104228.

Mansoori Mosleh, F., Mortazavi, Y., Hosseinpour, N., Khodadadi, A.A., 2020. Asphaltene adsorption onto carbonaceous nanostructures. Energy & Fuels 34, 211-224.

Payandi-Rolland, D., Shirokova, L.S., Nakhle, P., Tesfa, M., Abdou, A., Causserand, C., Lartiges, B., Rols, J.-L., Guérin, F., Bénézeth, P., Pokrovsky, O.S., 2020. Aerobic release and biodegradation of dissolved organic matter from frozen peat: Effects of temperature and heterotrophic bacteria. Chemical Geology 536, 119448.

Senatore, G., Mastroleo, F., Leys, N., Mauriello, G., 2020. Growth of Lactobacillus reuteri DSM17938 under two simulated microgravity systems: Changes in reuterin production, gastrointestinal passage resistance, and stress genes expression response. Astrobiology 20, 1-14.

Shen, P., Li, G., Li, B., Li, X., Liang, Y., Lv, Q., 2020. Permeability measurement and discovery of dissociation process of hydrate sediments. Journal of Natural Gas Science and Engineering 75, 103155.

Song, D., Tuo, J., Wang, Y., Wu, C., Zhang, M., 2019. Research advances on characteristics of nanopore structure of organic-rich shales. Acta Sedimentologica Sinica 37, 1309-1324.

Song, D., Tuo, J., Wu, C., Zhang, M., Su, L., 2020. Comparison of pore evolution for a Mesoproterozoic marine shale and a Triassic terrestrial mudstone during artificial maturation experiments. Journal of Natural Gas Science and Engineering 75, 103153.

Song, L., Carr, T.R., 2020. The pore structural evolution of the Marcellus and Mahantango shales, Appalachian Basin. Marine and Petroleum Geology 114, 104226.

Wang, C., Wu, K., Scott, G.G., Akisanya, A.R., Gan, Q., Zhou, Y., 2020. A new method for pore structure quantification and pore network extraction from SEM images. Energy & Fuels 34, 82-94.

Xu, S., Gou, Q., Hao, F., Zhang, B., Shu, Z., Lu, Y., Wang, Y., 2020. Shale pore structure characteristics of the high and low productivity wells, Jiaoshiba shale gas field, Sichuan Basin, China: Dominated by lithofacies or preservation condition? Marine and Petroleum Geology 114, 104211.

Yang, W., He, S., Iglauer, S., Guo, X., Zhai, G., Zhou, Z., Dong, T., Tao, Z., Wei, S., 2020. Porosity characteristics of different lithofacies in marine shale: A case study of Neoproterozoic Sinian Doushantuo formation in Yichang area, China. Journal of Petroleum Science and Engineering 187, 106856.

Zhang, K., Jia, C., Song, Y., Jiang, S., Jiang, Z., Wen, M., Huang, Y., Liu, X., Jiang, T., Peng, J., Wang, X., Xia, Q., Li, B., Li, X., Liu, T., 2020. Analysis of Lower Cambrian shale gas composition, source and accumulation pattern in different tectonic backgrounds: A case study of Weiyuan Block in the Upper Yangtze region and Xiuwu Basin in the Lower Yangtze region. Fuel 263, 115978.

Zhou, H., Chen, J., Li, H., Quan, K., Zhang, Y., Qiu, H., 2020. Imidazolium ionic liquid-enhanced poly(quinine)-modified silica as a new multi-mode chromatographic stationary phase for separation of achiral and chiral compounds. Talanta 211, 120743.

Imaging: Xray CT


Goral, J., Panja, P., Deo, M., Andrew, M., Linden, S., Schwarz, J.-O., Wiegmann, A., 2020. Confinement effect on porosity and permeability of shales. Scientific Reports 10, 49.

Jing, Z., Balucan, R.D., Underschultz, J.R., Pan, S., Steel, K.M., 2020. Chemical stimulation for enhancing coal seam permeability: Laboratory study into permeability variation and coal structure examination. International Journal of Coal Geology 219, 103375.

Liu, X., Lai, J., Fan, X., Shu, H., Wang, G., Ma, X., Liu, M., Guan, M., Luo, Y., 2020. Insights in the pore structure, fluid mobility and oiliness in oil shales of Paleogene Funing Formation in Subei Basin, China. Marine and Petroleum Geology 114, 104228.

Marone, F., Schlepütz, C.M., Marti, S., Fusseis, F., Velásquez-Parra, A., Griffa, M., Jiménez-Martínez, J., Dobson, K.J., Stampanoni, M., 2020. Time resolved in situ X-ray tomographic microscopy unraveling dynamic processes in geologic systems. Frontiers in Earth Science 7, 346. doi: 310.3389/feart.2019. 00346.

Schiffbauer, J.D., Selly, T., Jacquet, S.M., Merz, R.A., Nelson, L.L., Strange, M.A., Cai, Y., Smith, E.F., 2020. Discovery of bilaterian-type through-guts in cloudinomorphs from the terminal Ediacaran Period. Nature Communications 11, 205.

Stewart, T.A., Lemberg, J.B., Taft, N.K., Yoo, I., Daeschler, E.B., Shubin, N.H., 2020. Fin ray patterns at the fin-to-limb transition. Proceedings of the National Academy of Sciences 117, 1612-1620.

Zhang, W., Liang, J., Wei, J., Lu, J.a., Su, P., Lin, L., Huang, W., Guo, Y., Deng, W., Yang, X., Wan, Z., 2020. Geological and geophysical features of and controls on occurrence and accumulation of gas hydrates in the first offshore gas-hydrate production test region in the Shenhu area, Northern South China Sea. Marine and Petroleum Geology 114, 104191.

Liquid Chromatography/LC-MS/SFC

Bernardin, M., Masle, A.L., Bessueille-Barbier, F., Lienemann, C.-P., Heinisch, S., 2020. Comprehensive two-dimensional liquid chromatography with inductively coupled plasma mass spectrometry detection for the characterization of sulfur, vanadium and nickel compounds in petroleum products. Journal of Chromatography A 1611, 460605.

Broeckhoven, K., Desmet, G., 2020. Advances and challenges in extremely high-pressure liquid chromatography in current and future analytical scale column formats. Analytical Chemistry 92, 554-560.

Caputo, M., Lyles, J.T., Salazar, M., Quave, C.L., 2020. LEGO MINDSTORMS fraction collector: A low-cost tool for a preparative high performance liquid chromatography system. Analytical Chemistry 92, 1687-1690.

Cerrato, A., Cannazza, G., Capriotti, A.L., Citti, C., La Barbera, G., Laganà, A., Montone, C.M., Piovesana, S., Cavaliere, C., 2020. A new software-assisted analytical workflow based on high-resolution mass spectrometry for the systematic study of phenolic compounds in complex matrices. Talanta 209, 120573.

Hohrenk, L.L., Itzel, F., Baetz, N., Tuerk, J., Vosough, M., Schmidt, T.C., 2020. Comparison of software tools for liquid chromatography–high-resolution mass spectrometry data processing in nontarget screening of environmental samples. Analytical Chemistry 92, 1898-1907.

Kaplitz, A.S., Kresge, G.A., Selover, B., Horvat, L., Franklin, E.G., Godinho, J.M., Grinias, K.M., Foster, S.W., Davis, J.J., Grinias, J.P., 2020. High-throughput and ultrafast liquid chromatography. Analytical Chemistry 92, 67-84.

Korf, A., Fouquet, T., Schmid, R., Hayen, H., Hagenhoff, S., 2020. Expanding the Kendrick mass plot toolbox in MZmine 2 to enable rapid polymer characterization in liquid chromatography−mass spectrometry data sets. Analytical Chemistry 92, 628-633.

Koshel, B., Birdsall, R., Chen, W., 2020. Two-dimensional liquid chromatography coupled to mass spectrometry for impurity analysis of dye-conjugated oligonucleotides. Journal of Chromatography B 1137, 121906.

Melnikov, A.D., Tsentalovich, Y.P., Yanshole, V.V., 2020. Deep learning for the precise peak detection in high-resolution LC–MS data. Analytical Chemistry 92, 588-592.

Ovchinnikov, D.V., Pokrovskiy, O.I., Kosyakov, D.S., Bogolitsyn, K.G., Ul'yanovskii, N.V., Falev, D.I., 2020. Evaluation of temperature and pressure effects on retention in supercritical fluid chromatography on polar stationary phases. Journal of Chromatography A 1610, 460600.

Pham, H.-T.-T., Kim, H.-W., Han, S., Ryu, B., Doan, T.-P., An, J.-P., Tran, V.-O., Oh, W.-K., 2019. Development of a building block strategy to target the classification, identification, and metabolite profiling of oleanane triterpenoids in Gymnema sylvestre using UHPLC-qTOF/MS. Journal of Natural Products 82, 3249-3266.

Reymond, C., Dubuis, A., Le Masle, A., Colas, C., Chahen, L., Destandau, E., Charon, N., 2020. Characterization of liquid–liquid extraction fractions from lignocellulosic biomass by high performance liquid chromatography hyphenated to tandem high-resolution mass spectrometry. Journal of Chromatography A 1610, 460569.

Sorensen, M.J., Miller, K.E., Jorgenson, J.W., Kennedy, R.T., 2020. Ultrahigh-Performance capillary liquid chromatography-mass spectrometry at 35 kpsi for separation of lipids. Journal of Chromatography A 1611, 460575.

Yu, Y., Li, G., Wu, D., Liu, J., Chen, J., Hu, N., Wang, H., Wang, P., Wu, Y., 2020. Thiol radical-based chemical isotope labelling for sterols quantitation through high performance liquid chromatography-tandem mass spectrometry analysis. Analytica Chimica Acta 1097, 110-119.

Zhou, H., Chen, J., Li, H., Quan, K., Zhang, Y., Qiu, H., 2020. Imidazolium ionic liquid-enhanced poly(quinine)-modified silica as a new multi-mode chromatographic stationary phase for separation of achiral and chiral compounds. Talanta 211, 120743.

Zyakun, A.M., Kochetkov, V.V., Zakharchenko, V.N., Baskunov, B.P., Peshenko, V.P., Laurinavichius, K.S., Siunova, T.V., Anokhina, T.O., Boronin, A.M., 2019. Application of high-performance liquid chromatography/high resolution mass spectrometry to the investigation of the biodegradation and transformation of phenanthrene by a plasmid bearing rhizosphere bacteria Pseudomonas aureofaciens. Journal of Analytical Chemistry 74, 1355-1361.

Mass Spectroscopy/ICR-FTMS/Orbitrap

Arevalo Jr, R., Ni, Z., Danell, R.M., 2020. Mass spectrometry and planetary exploration: A brief review and future projection. Journal of Mass Spectrometry 55, e4454.

Gautier, T., Danger, G., Mousis, O., Duvernay, F., Vuitton, V., Flandinet, L., Thissen, R., Orthous-Daunay, F.R., Ruf, A., Chiavassa, T., d'Hendecourt, L.S., 2020. Laboratory experiments to unveil the molecular reactivity occurring during the processing of ices in the protosolar nebula. Earth and Planetary Science Letters 531, 116011.

Han, Y., Poetz, S., Mahlstedt, N., Horsfield, B., 2020. On the release of acidic NSO compounds from the oil-mature Barnett Shale using different solvents. Journal of Petroleum Science and Engineering 185, 106605.

Liu, Y., Ye, Q., Huang, W.-L., Feng, L., Wang, Y.-H., Xie, Z., Yong, S.-S., Zhang, S., Jiang, B., Zheng, Y., Wang, J.-J., 2020. Spectroscopic and molecular-level characteristics of dissolved organic matter in the Pearl River Estuary, South China. Science of The Total Environment 710, 136307.

Miranda, M.L., Osterholz, H., Giebel, H.A., Bruhnke, P., Dittmar, T., Zielinski, O., 2020. Impact of UV radiation on DOM transformation on molecular level using FT-ICR-MS and PARAFAC. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 230, 118027.


Qi, Y., Fu, P., Li, S., Ma, C., Liu, C., Volmer, D.A., 2020. Assessment of molecular diversity of lignin products by various ionization techniques and high-resolution mass spectrometry. Science of The Total Environment 713, 136573.


Wang, H., Ge, D., Cheng, Z., Zhu, N., Yuan, H., Lou, Z., 2020. Improved understanding of dissolved organic matter transformation in concentrated leachate induced by hydroxyl radicals and reactive chlorine species. Journal of Hazardous Materials 397, 121702.

Xu, L., Li, X., Wang, X., Song, A., Han, F., 2020. A feasible strategy based on isotopic fine structures to enhance the reliability of metabolite identification by Fourier transform ion cyclotron resonance mass spectrometry. Rapid Communications in Mass Spectrometry 34, e8560.

Yu, K., Duan, Y., Gan, Y., Zhang, Y., Zhao, K., 2020. Anthropogenic influences on dissolved organic matter transport in high arsenic groundwater: Insights from stable carbon isotope analysis and electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Science of The Total Environment 708, 135162.

Zhang, P., Huang, P., Xu, X., Sun, H., Jiang, B., Liao, Y., 2020. Spectroscopic and molecular characterization of biochar-derived dissolved organic matter and the associations with soil microbial responses. Science of The Total Environment 708, 134619.

Zhang, Y.-Y., Wei, X.-Y., Lv, J.-H., Jiang, H., Liu, F.-J., Liu, G.-H., Zong, Z.-M., 2019. Characterization of nitrogen-containing aromatics in Baiyinhua lignite and its soluble portions from thermal dissolution. Chinese Journal of Chemical Engineering 27, 2783-2787.

Mass Spectroscopy/Other


Bittremieux, W., 2020. spectrum_utils: A Python package for mass spectrometry data processing and visualization. Analytical Chemistry 92, 659-661.

Chen, X., Zhu, L., Cui, C., Zhu, Y., Zhou, Z., Qi, F., 2020. In situ atmospheric pressure photoionization mass spectrometric monitoring of initial pyrolysis products of biomass in real time. Analytical Chemistry 92, 603-606.

Colby, S.M., Nuñez, J.R., Hodas, N.O., Corley, C.D., Renslow, R.R., 2020. Deep learning to generate in silico chemical property libraries and candidate molecules for small molecule identification in complex samples. Analytical Chemistry 92, 1720-1729.

Fouquet, T.N.J., 2019. The Kendrick analysis for polymer mass spectrometry. Journal of Mass Spectrometry 54, 933-947.

Gorman, B.L., Kraft, M.L., 2020. High-resolution secondary ion mass spectrometry analysis of cell membranes. Analytical Chemistry 92, 1645-1652.

Kwok, H., Yan, J., Brunswick, P., McMaster, M., Evans, M., Kim, M., Helbing, C., van Aggelen, G., Shang, D., 2020. Ultra trace simultaneous determination of 50 polycyclic aromatic hydrocarbons in biota using pMRM GC-MS/MS. Environmental Forensics 21, 87-98.

Long, T., Clement, S.W.J., Xie, H., Liu, D., 2020. Design, construction and performance of a TOF-SIMS for analysis of trace elements in geological materials. International Journal of Mass Spectrometry 450, 116289.

Pérez-Guaita, D., Quintás, G., Kuligowski, J., 2020. Discriminant analysis and feature selection in mass spectrometry imaging using constrained repeated random sampling - Cross validation (CORRS-CV). Analytica Chimica Acta 1097, 30-36.

Piehowski, P.D., Zhu, Y., Bramer, L.M., Stratton, K.G., Zhao, R., Orton, D.J., Moore, R.J., Yuan, J., Mitchell, H.D., Gao, Y., Webb-Robertson, B.-J.M., Dey, S.K., Kelly, R.T., Burnum-Johnson, K.E., 2020. Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution. Nature Communications 11, 8.

Rahi, P., Vaishampayan, P., 2020. Editorial: MALDI-TOF MS application in microbial ecology studies. Frontiers in Microbiology 10, 2954. doi: 2910.3389/fmicb.2019. 02954.

Santana, A., Comas, A., Wise, S., Wilson, W.B., Campiglia, A.D., 2020. Instrumental improvements for the trace analysis of structural isomers of polycyclic aromatic hydrocarbons with molecular mass 302 Da. Analytica Chimica Acta 1100, 163-173.

Shi, X., Qiu, X., Cheng, Z., Chen, Q., Rudich, Y., Zhu, T., 2020. Isomeric identification of particle-phase organic nitrates through gas chromatography and time-of-flight mass spectrometry coupled with an electron capture negative ionization source. Environmental Science & Technology 54, 707-713.

Wang, T., Cheng, X., Xu, H., Meng, Y., Yin, Z., Li, X., Hang, W., 2020. Perspective on advances in laser-based high-resolution mass spectrometry imaging. Analytical Chemistry 92, 543-553.

Wu, Q., Wang, J.-Y., Han, D.-Q., Yao, Z.-P., 2020. Recent advances in differentiation of isomers by ion mobility mass spectrometry. TrAC Trends in Analytical Chemistry 124, 115801.

Metabolomics/Lipidomics

Arif, M., Bai, Y., Usman, M., Jalalah, M., Harraz, F.A., Al-Assiri, M.S., Li, X., Salama, E.-S., Zhang, C., 2020. Highest accumulated microalgal lipids (polar and non-polar) for biodiesel production with advanced wastewater treatment: Role of lipidomics. Bioresource Technology 298, 122299.

Coffinet, S.C., Meador, T.B., Mühlena, L., Becker, K.W., Schröder, J., Zhu, Q.-Z., Lipp, J.S., Heuer, V.B., Crump, M.P., Hinrichs, K.-U., 2020. Structural elucidation and environmental distributions of butanetriol and pentanetriol dialkyl glycerol tetraethers (BDGTs and PDGTs). Biogeosciences 17, 317-330.

Colby, S.M., Nuñez, J.R., Hodas, N.O., Corley, C.D., Renslow, R.R., 2020. Deep learning to generate in silico chemical property libraries and candidate molecules for small molecule identification in complex samples. Analytical Chemistry 92, 1720-1729.

de Sousa, J., Vencálek, O., Hron, K., Václavík, J., Friedecký, D., Adam, T., 2020. Bayesian multiple hypotheses testing in compositional analysis of untargeted metabolomic data. Analytica Chimica Acta 1097, 49-61.

González-Riano, C., Dudzik, D., Garcia, A., Gil-de-la-Fuente, A., Gradillas, A., Godzien, J., López-Gonzálvez, Á., Rey-Stolle, F., Rojo, D., Ruperez, F.J., Saiz, J., Barbas, C., 2020. Recent developments along the analytical process for metabolomics workflows. Analytical Chemistry 92, 203-226.

Griffiths, W., Wang, Y. (eds), 2020. Lipidomics: Current and Emerging Techniques New Developments in Mass Spectrometry. Royal Society of Chemistry, 288 pp.

Grissa, D., Comte, B., Pétéra, M., Pujos-Guillot, E., Napoli, A., 2020. A hybrid and exploratory approach to knowledge discovery in metabolomic data. Discrete Applied Mathematics 273, 103-116.

Kaplitz, A.S., Kresge, G.A., Selover, B., Horvat, L., Franklin, E.G., Godinho, J.M., Grinias, K.M., Foster, S.W., Davis, J.J., Grinias, J.P., 2020. High-throughput and ultrafast liquid chromatography. Analytical Chemistry 92, 67-84.

Melnikov, A.D., Tsentalovich, Y.P., Yanshole, V.V., 2020. Deep learning for the precise peak detection in high-resolution LC–MS data. Analytical Chemistry 92, 588-592.

Rahi, P., Vaishampayan, P., 2020. Editorial: MALDI-TOF MS application in microbial ecology studies. Frontiers in Microbiology 10, 2954. doi: 2910.3389/fmicb.2019. 02954.

Sorensen, M.J., Miller, K.E., Jorgenson, J.W., Kennedy, R.T., 2020. Ultrahigh-Performance capillary liquid chromatography-mass spectrometry at 35 kpsi for separation of lipids. Journal of Chromatography A 1611, 460575.

Sun, Q., Fan, T.W.M., Lane, A.N., Higashi, R.M., 2020. Applications of chromatography-ultra high-resolution MS for stable isotope-resolved metabolomics (SIRM) reconstruction of metabolic networks. TrAC Trends in Analytical Chemistry 123, 115676.

Xia, J.-M., Hu, X.-M., Huang, C.-H., Yu, L.-B., Xu, R.-F., Tang, X.-X., Lin, D.-H., 2020. Metabolic profiling of cold adaptation of a deep-sea psychrotolerant Microbacterium sediminis to prolonged low temperature under high hydrostatic pressure. Applied Microbiology and Biotechnology 104, 277-289.

Xu, L., Li, X., Wang, X., Song, A., Han, F., 2020. A feasible strategy based on isotopic fine structures to enhance the reliability of metabolite identification by Fourier transform ion cyclotron resonance mass spectrometry. Rapid Communications in Mass Spectrometry 34, e8560.

Zhao, J., Wang, G., Chu, J., Zhuang, Y., 2019. Harnessing microbial metabolomics for industrial applications. World Journal of Microbiology and Biotechnology 36, 1.

Puppyomics

Ameen, C., Feuerborn, T.R., Brown, S.K., Linderholm, A., Hulme-Beaman, A., Lebrasseur, O., Sinding, M.-H.S., Lounsberry, Z.T., Lin, A.T., Appelt, M., Bachmann, L., Betts, M., Britton, K., Darwent, J., Dietz, R., Fredholm, M., Gopalakrishnan, S., Goriunova, O.I., Grønnow, B., Haile, J., Hallsson, J.H., Harrison, R., Heide-Jørgensen, M.P., Knecht, R., Losey, R.J., Masson-MacLean, E., McGovern, T.H., McManus-Fry, E., Meldgaard, M., Midtdal, Å., Moss, M.L., Nikitin, I.G., Nomokonova, T., Pálsdóttir, A.H., Perri, A., Popov, A.N., Rankin, L., Reuther, J.D., Sablin, M., Schmidt, A.L., Shirar, S., Smiarowski, K., Sonne, C., Stiner, M.C., Vasyukov, M., West, C.F., Ween, G.B., Wennerberg, S.E., Wiig, Ø., Woollett, J., Dalén, L., Hansen, A.J., P. Gilbert, M.T., Sacks, B.N., Frantz, L., Larson, G., Dobney, K., Darwent, C.M., Evin, A., 2019. Specialized sledge dogs accompanied Inuit dispersal across the North American Arctic. Proceedings of the Royal Society B: Biological Sciences 286, 20191929.

Root-Gutteridge, H., Ratcliffe, V.F., Korzeniowska, A.T., Reby, D., 2019. Dogs perceive and spontaneously normalize formant-related speaker and vowel differences in human speech sounds. Biology Letters 15, 20190555.

Archaeological/Art Organic Chemistry

Azevedo, V., Stríkis, N.M., Santos, R.A., de Souza, J.G., Ampuero, A., Cruz, F.W., de Oliveira, P., Iriarte, J., Stumpf, C.F., Vuille, M., Mendes, V.R., Cheng, H., Edwards, R.L., 2019. Medieval climate variability in the eastern Amazon-Cerrado regions and its archeological implications. Scientific Reports 9, 20306.

Bartelink, E.J., Beasley, M.M., Eerkens, J.W., Gardner, K.S., Wiberg, R.S., Garibay, R., 2020. Stable isotope evidence of diet breadth expansion and regional dietary variation among Middle-to-Late Holocene Hunter-Gatherers of Central California. Journal of Archaeological Science: Reports 29, 102182.

Cardona, P.-J., Català, M., Prats, C., 2020. Origin of tuberculosis in the Paleolithic predicts unprecedented population growth and female resistance. Scientific Reports 10, 42.

Cojoc, L.R., Enache, M.I., Neagu, S.E., Lungulescu, M., Setnescu, R., Ruginescu, R., Gomoiu, I., 2019. Carotenoids produced by halophilic bacterial strains on mural paintings and laboratory conditions. FEMS Microbiology Letters 366, fnz243.

Fernández-Crespo, T., Snoeck, C., Ordoño, J., de Winter, N.J., Czermak, A., Mattielli, N., Lee-Thorp, J.A., Schulting, R.J., 2020. Multi-isotope evidence for the emergence of cultural alterity in Late Neolithic Europe. Science Advances 6, eaay2169.

Fu, Y., Chen, Z., Zhou, S., Wei, S., 2020. Comparative study of the materials and lacquering techniques of the lacquer objects from Warring States Period China. Journal of Archaeological Science 114, 105060.

Holakooei, P., Karimy, A.-H., Saeidi-Anaraki, F., Vaccaro, C., Sabatini, F., Degano, I., Colombini, M.P., 2020. Colourants on the wall paintings of a mediӕval fortress at the mount Sofeh in Isfahan, central Iran. Journal of Archaeological Science: Reports 29, 102065.

Moore, J., Rose, A., Anderson, S., Evans, J., Nowell, G., Gröcke, D.R., Pashley, V., Kirby, M., Montgomery, J., 2020. A multi-isotope (C, N, O, Sr, Pb) study of Iron Age and Roman period skeletons from east Edinburgh, Scotland exploring the relationship between decapitation burials and geographical origins. Journal of Archaeological Science: Reports 29, 102075.

Petrone, P., Pucci, P., Niola, M., Baxter, P.J., Fontanarosa, C., Giordano, G., Graziano, V., Sirano, F., Amoresano, A., 2020. Heat-induced brain vitrification from the Vesuvius eruption in c.e. 79. New England Journal of Medicine 382, 383-384.

Plecerová, A., Kaupová Drtikolová, S., Šmerda, J., Stloukal, M., Velemínský, P., 2020. Dietary reconstruction of the Moravian Lombard population (Kyjov, 5th–6th centuries AD, Czech Republic) through stable isotope analysis (δ13C, δ15N). Journal of Archaeological Science: Reports 29, 102062.

Ramsøe, A., van Heekeren, V., Ponce, P., Fischer, R., Barnes, I., Speller, C., Collins, M.J., 2020. DeamiDATE 1.0: Site-specific deamidation as a tool to assess authenticity of members of ancient proteomes. Journal of Archaeological Science 115, 105080.

Stacey, R.J., Dunne, J., Brunning, S., Devièse, T., Mortimer, R., Ladd, S., Parfitt, K., Evershed, R., Bull, I., 2020. Birch bark tar in early Medieval England – Continuity of tradition or technological revival? Journal of Archaeological Science: Reports 29, 102118.

Tomczyk, J., Regulski, P., Lisowska-Gaczorek, A., Szostek, K., 2020. Dental caries and stable isotopes analyses in the reconstruction of diet in Mesolithic (6815–5900 BC) individuals from Northeastern Poland. Journal of Archaeological Science: Reports 29, 102141.

Voskos, I., Vika, E., 2020. Prehistoric human remains reviewed: Palaeopathology and palaeodiet in Neolithic and Chalcolithic Cyprus, Limassol district. Journal of Archaeological Science: Reports 29, 102128.

Wadley, L., Backwell, L., d’Errico, F., Sievers, C., 2020. Cooked starchy rhizomes in Africa 170 thousand years ago. Science 367, 87-91.

Zhu, Z., Yu, C., Luo, W., Miao, Y., Lu, Z., Liu, L., Yang, J., 2020. Accurate identification of the pastry contained in a ceramic pot excavated from Jurou Li's grave from the Jin dynasty (1115–1234 ce) in Xi'an, Shaanxi, China. Archaeometry 62, 130-140.

Biochemistry

Bižić, M., Klintzsch, T., Ionescu, D., Hindiyeh, M.Y., Günthel, M., Muro-Pastor, A.M., Eckert, W., Urich, T., Keppler, F., Grossart, H.P., 2020. Aquatic and terrestrial cyanobacteria produce methane. Science Advances 6, eaax5343.

Culka, A., Košek, F., Oren, A., Mana, L., Jehlička, J., 2019. Detection of carotenoids of halophilic prokaryotes in solid inclusions inside laboratory-grown chloride and sulfate crystals using a portable Raman spectrometer: applications for Mars exploration. FEMS Microbiology Letters 366, fnz239.

DasSarma, S., DasSarma, P., Laye, V.J., Schwieterman, E.W., 2020. Extremophilic models for astrobiology: haloarchaeal survival strategies and pigments for remote sensing. Extremophiles 24, 31-41.

Guzmán-Trampe, S.M., Ikeda, H., Vinuesa, P., Macías-Rubalcava, M.L., Esquivel, B., Centeno-Leija, S., Tapia-Cabrera, S.M., Mora-Herrera, S.I., Ruiz-Villafán, B., Rodríguez-Sanoja, R., Sanchez, S., 2020. Production of distinct labdane-type diterpenoids using a novel cryptic labdane-like cluster from Streptomyces thermocarboxydus K155. Applied Microbiology and Biotechnology 104, 741-750.

Holert, J., Brown, K., Hashimi, A., Eltis, L.D., Mohn, W.W., 2020. Steryl ester formation and accumulation in steroid-degrading bacteria. Applied and Environmental Microbiology 86, e02353-02319.

Johnsen, U., Sutter, J.-M., Reinhardt, A., Pickl, A., Wang, R., Xiang, H., Schönheit, P., 2020. D-Ribose catabolism in archaea: Discovery of a novel oxidative pathway in Haloarcula species. Journal of Bacteriology 202, e00608-00619.

Kato, K., Shinoda, T., Nagao, R., Akimoto, S., Suzuki, T., Dohmae, N., Chen, M., Allakhverdiev, S.I., Shen, J.-R., Akita, F., Miyazaki, N., Tomo, T., 2020. Structural basis for the adaptation and function of chlorophyll f in photosystem I. Nature Communications 11, 238.

Larson, B.T., Ruiz-Herrero, T., Lee, S., Kumar, S., Mahadevan, L., King, N., 2020. Biophysical principles of choanoflagellate self-organization. Proceedings of the National Academy of Sciences 117, 1303-1311.

Le, T., Žárský, V., Nývltová, E., Rada, P., Harant, K., Vancová, M., Verner, Z., Hrdý, I., Tachezy, J., 2020. Anaerobic peroxisomes in Mastigamoeba balamuthi. Proceedings of the National Academy of Sciences 117, 2065-2075.

Liu, X., Jing, X., Ye, Y., Zhan, J., Ye, J., Zhou, S., 2020. Bacterial vesicles mediate extracellular electron transfer. Environmental Science & Technology Letters 7, 27-34.

Ma, X., Meng, L., Zhang, H., Zhou, L., Yue, J., Zhu, H., Yao, R., 2020. Sophorolipid biosynthesis and production from diverse hydrophilic and hydrophobic carbon substrates. Applied Microbiology and Biotechnology 104, 77-100.

Marcone, G.L., Rosini, E., Crespi, E., Pollegioni, L., 2020. D-amino acids in foods. Applied Microbiology and Biotechnology 104, 555-574.

Orsi, W.D., Vuillemin, A., Rodriguez, P., Coskun, Ö.K., Gomez-Saez, G.V., Lavik, G., Morholz, V., Ferdelman, T.G., 2020. Metabolic activity analyses demonstrate that Lokiarchaeon exhibits homoacetogenesis in sulfidic marine sediments. Nature Microbiology 5, 248-255.

Pfeiffer, D., Schüler, D., 2020. Quantifying the benefit of a dedicated “magnetoskeleton” in bacterial magnetotaxis by live-cell motility tracking and soft agar swimming assay. Applied and Environmental Microbiology 86, e01976-01919.

Teixeira, L.R., Cordas, C.M., Fonseca, M.P., Duke, N.E.C., Pokkuluri, P.R., Salgueiro, C.A., 2020. Modulation of the redox potential and electron/proton transfer mechanisms in the outer membrane cytochrome OmcF from Geobacter sulfurreducens. Frontiers in Microbiology 10, 2941. doi: 2910.3389/fmicb.2019. 02941.

Vo, N.N.Q., Nomura, Y., Muranaka, T., Fukushima, E.O., 2019. Structure–activity relationships of pentacyclic triterpenoids as inhibitors of cyclooxygenase and lipoxygenase enzymes. Journal of Natural Products 82, 3311-3320.

Zhou, A., Weber, Y., Chiu, B.K., Elling, F.J., Cobban, A.B., Pearson, A., Leavitt, W.D., 2020. Energy flux controls tetraether lipid cyclization in Sulfolobus acidocaldarius. Environmental Microbiology 22, 343-353.

Biodegradation

Balfourier, A., Luciani, N., Wang, G., Lelong, G., Ersen, O., Khelfa, A., Alloyeau, D., Gazeau, F., Carn, F., 2020. Unexpected intracellular biodegradation and recrystallization of gold nanoparticles. Proceedings of the National Academy of Sciences 117, 103-113.

Boll, M., Geiger, R., Junghare, M., Schink, B., 2020. Microbial degradation of phthalates: biochemistry and environmental implications. Environmental Microbiology Reports 12, 3-15.

Cerqueda-García, D., García-Maldonado, J.Q., Aguirre-Macedo, L., García-Cruz, U., 2020. A succession of marine bacterial communities in batch reactor experiments during the degradation of five different petroleum types. Marine Pollution Bulletin 150, 110775.

Cierniak, D., Woźniak-Karczewska, M., Parus, A., Wyrwas, B., Loibner, A.P., Heipieper, H.J., Ławniczak, Ł., Chrzanowski, Ł., 2020. How to accurately assess surfactant biodegradation-impact of sorption on the validity of results. Applied Microbiology and Biotechnology 104, 1-12.

Hackbusch, S., Noirungsee, N., Viamonte, J., Sun, X., Bubenheim, P., Kostka, J.E., Müller, R., Liese, A., 2020. Influence of pressure and dispersant on oil biodegradation by a newly isolated Rhodococcus strain from deep-sea sediments of the Gulf of Mexico. Marine Pollution Bulletin 150, 110683.

Jacquemot, P., Viennet, J.-C., Bernard, S., Le Guillou, C., Rigaud, B., Delbes, L., Georgelin, T., Jaber, M., 2019. The degradation of organic compounds impacts the crystallization of clay minerals and vice versa. Scientific Reports 9, 20251.

Li, Z., Huang, H., Zhang, S., 2020. The effect of biodegradation on bound biomarkers released from intermediate-temperature gold-tube pyrolysis of severely biodegraded Athabasca bitumen. Fuel 263, 116669.

Liu, Y., Wang, W., Shah, S.B., Zanaroli, G., Xu, P., Tang, H., 2020. Phenol biodegradation by Acinetobacter radioresistens APH1 and its application in soil bioremediation. Applied Microbiology and Biotechnology 104, 427-437.

Ngueleu, S.K., Al-Raoush, R.I., Shafieiyoun, S., Rezanezhad, F., Van Cappellen, P., 2019. Biodegradation kinetics of benzene and naphthalene in the vadose and saturated zones of a (semi)-arid saline coastal soil environment. Geofluids 2019, 8124716.

Payandi-Rolland, D., Shirokova, L.S., Nakhle, P., Tesfa, M., Abdou, A., Causserand, C., Lartiges, B., Rols, J.-L., Guérin, F., Bénézeth, P., Pokrovsky, O.S., 2020. Aerobic release and biodegradation of dissolved organic matter from frozen peat: Effects of temperature and heterotrophic bacteria. Chemical Geology 536, 119448.

Peng, C., Tang, Y., Yang, H., He, Y., Liu, Y., Liu, D., Qian, Y., Lu, L., 2020. Time- and compound-dependent microbial community compositions and oil hydrocarbon degrading activities in seawater near the Chinese Zhoushan Archipelago. Marine Pollution Bulletin 152, 110907.

Sun, P., Cai, C., Tang, Y., Tao, Z., Zhao, W., 2020. A new approach to investigate effects of biodegradation on pyrrolic compounds by using a modified Manco scale. Fuel 265, 116937.

Vila, J., Tian, Z., Wang, H., Bodnar, W., Aitken, M.D., 2020. Isomer-selective biodegradation of high-molecular-weight azaarenes in PAH-contaminated environmental samples. Science of The Total Environment 707, 135503.

Biodegradation Pathways/Genomics

Cao, H., Wang, C., Liu, H., Jia, W., Sun, H., 2020. Enzyme activities during benzo[a]pyrene degradation by the fungus Lasiodiplodia theobromae isolated from a polluted soil. Scientific Reports 10, 865.

Liu, W.-W., Pan, J., Feng, X., Li, M., Xu, Y., Wang, F., Zhou, N.-Y., 2020. Evidences of aromatic degradation dominantly via the phenylacetic acid pathway in marine benthic Thermoprofundales. Environmental Microbiology 22, 329-342.

Martín-Cabello, G., Terrón-González, L., Ferrer, M., Santero, E., 2020. Identification of a complete dibenzothiophene biodesulfurization operon and its regulator by functional metagenomics. Environmental Microbiology 22, 91-106.

Miyazawa, D., Thanh, L.T.H., Tani, A., Shintani, M., Loc, N.H., Hatta, T., Kimbara, K., 2019. Isolation and characterization of genes responsible for naphthalene degradation from thermophilic naphthalene degrader, Geobacillus sp. JF8. Microorganisms 8, 44.

Oshlag, J.Z., Ma, Y., Morse, K., Burger, B.T., Lemke, R.A., Karlen, S.D., Myers, K.S., Donohue, T.J., Noguera, D.R., 2020. Anaerobic degradation of syringic acid by an adapted strain of Rhodopseudomonas palustris. Applied and Environmental Microbiology 86, e01888-01819.

Wang, S., Li, S., Du, D., Wang, D., Yan, W., 2020. Conjugative transfer of Megaplasmids pND6–1 and pND6–2 enhancing naphthalene degradation in aqueous environment: characterization and bioaugmentation prospects. Applied Microbiology and Biotechnology 104, 861-871.

Xu, P., Du, H., Peng, X., Tang, Y., Zhou, Y., Chen, X., Fei, J., Meng, Y., Yuan, L., 2020. Degradation of several polycyclic aromatic hydrocarbons by laccase in reverse micelle system. Science of The Total Environment 708, 134970.

Zyakun, A.M., Kochetkov, V.V., Zakharchenko, V.N., Baskunov, B.P., Peshenko, V.P., Laurinavichius, K.S., Siunova, T.V., Anokhina, T.O., Boronin, A.M., 2019. Application of high-performance liquid chromatography/high resolution mass spectrometry to the investigation of the biodegradation and transformation of phenanthrene by a plasmid bearing rhizosphere bacteria Pseudomonas aureofaciens. Journal of Analytical Chemistry 74, 1355-1361.

Biofuels/Biomass/Bioengineering

Abraham, A., Mathew, A.K., Park, H., Choi, O., Sindhu, R., Parameswaran, B., Pandey, A., Park, J.H., Sang, B.-I., 2020. Pretreatment strategies for enhanced biogas production from lignocellulosic biomass. Bioresource Technology 301, 122725.

Ali, N., Zhang, Q., Liu, Z.-Y., Li, F.-L., Lu, M., Fang, X.-C., 2020. Emerging technologies for the pretreatment of lignocellulosic materials for bio-based products. Applied Microbiology and Biotechnology 104, 455-473.

Arif, M., Bai, Y., Usman, M., Jalalah, M., Harraz, F.A., Al-Assiri, M.S., Li, X., Salama, E.-S., Zhang, C., 2020. Highest accumulated microalgal lipids (polar and non-polar) for biodiesel production with advanced wastewater treatment: Role of lipidomics. Bioresource Technology 298, 122299.

Bhatia, S.K., Jagtap, S.S., Bedekar, A.A., Bhatia, R.K., Patel, A.K., Pant, D., Rajesh Banu, J., Rao, C.V., Kim, Y.-G., Yang, Y.-H., 2020. Recent developments in pretreatment technologies on lignocellulosic biomass: Effect of key parameters, technological improvements, and challenges. Bioresource Technology 300, 122724.

Bugg, T.D.H., Williamson, J.J., Rashid, G.M.M., 2020. Bacterial enzymes for lignin depolymerisation: new biocatalysts for generation of renewable chemicals from biomass. Current Opinion in Chemical Biology 55, 26-33.

Chen, P.H., Venegas Jimenez, J.L., Rowland, S.M., Quinn, J.C., Laurens, L.M.L., 2020. Nutrient recycle from algae hydrothermal liquefaction aqueous phase through a novel selective remediation approach. Algal Research 46, 101776.

Chen, X., Zhu, L., Cui, C., Zhu, Y., Zhou, Z., Qi, F., 2020. In situ atmospheric pressure photoionization mass spectrometric monitoring of initial pyrolysis products of biomass in real time. Analytical Chemistry 92, 603-606.

de Carvalho, J.C., Magalhães, A.I., de Melo Pereira, G.V., Medeiros, A.B.P., Sydney, E.B., Rodrigues, C., Aulestia, D.T.M., de Souza Vandenberghe, L.P., Soccol, V.T., Soccol, C.R., 2020. Microalgal biomass pretreatment for integrated processing into biofuels, food, and feed. Bioresource Technology 300, 122719.

Dixon, R.A., Barros, J., 2020. Lignin biosynthesis: old roads revisited and new roads explored. Open Biology 9, 190215.

Elkasabi, Y., Wyatt, V., Jones, K., Strahan, G.D., Mullen, C.A., Boateng, A.A., 2020. Hydrocarbons extracted from advanced pyrolysis bio-oils: Characterization and refining. Energy & Fuels 34, 483-490.


Patel, A.K., Choi, Y.Y., Sim, S.J., 2020. Emerging prospects of mixotrophic microalgae: Way forward to sustainable bioprocess for environmental remediation and cost-effective biofuels. Bioresource Technology 300, 122741.

Pereira, E., Meirelles, A.J.A., Maximo, G.J., 2020. Predictive models for physical properties of fats, oils, and biodiesel fuels. Fluid Phase Equilibria 508, 112440.

Priharto, N., Ronsse, F., Yildiz, G., Heeres, H.J., Deuss, P.J., Prins, W., 2020. Fast pyrolysis with fractional condensation of lignin-rich digested stillage from second-generation bioethanol production. Journal of Analytical and Applied Pyrolysis 145, 104756.

Qi, Y., Fu, P., Li, S., Ma, C., Liu, C., Volmer, D.A., 2020. Assessment of molecular diversity of lignin products by various ionization techniques and high-resolution mass spectrometry. Science of The Total Environment 713, 136573.


Saini, R., Hegde, K., Brar, S.K., Vezina, P., 2020. Advanced biofuel production and road to commercialization: An insight into bioconversion potential of Rhodosporidium sp. Biomass and Bioenergy 132, 105439.

Sandoval, B.A., Hyster, T.K., 2020. Emerging strategies for expanding the toolbox of enzymes in biocatalysis. Current Opinion in Chemical Biology 55, 45-51.

Sankaran, R., Parra Cruz, R.A., Pakalapati, H., Show, P.L., Ling, T.C., Chen, W.-H., Tao, Y., 2020. Recent advances in the pretreatment of microalgal and lignocellulosic biomass: A comprehensive review. Bioresource Technology 298, 122476.

Schena, T., Lazzari, E., Primaz, C., Canielas Krause, L., Machado, M.E., Bastos Caramão, E., 2020. Upgrading of coconut fibers bio-oil: An investigation by GC×GC/TOFMS. Journal of Environmental Chemical Engineering 8, 103662.

Shu, R., Li, R., Lin, B., Wang, C., Cheng, Z., Chen, Y., 2020. A review on the catalytic hydrodeoxygenation of lignin-derived phenolic compounds and the conversion of raw lignin to hydrocarbon liquid fuels. Biomass and Bioenergy 132, 105432.

Siqueira, J.G.W., Rodrigues, C., Vandenberghe, L.P.d.S., Woiciechowski, A.L., Soccol, C.R., 2020. Current advances in on-site cellulase production and application on lignocellulosic biomass conversion to biofuels: A review. Biomass and Bioenergy 132, 105419.

Yoo, C.G., Meng, X., Pu, Y., Ragauskas, A.J., 2020. The critical role of lignin in lignocellulosic biomass conversion and recent pretreatment strategies: A comprehensive review. Bioresource Technology 301, 122784.

Zayulina, K.S., Kochetkova, T.V., Piunova, U.E., Ziganshin, R.H., Podosokorskaya, O.A., Kublanov, I.V., 2020. Novel hyperthermophilic crenarchaeon Thermofilum adornatum sp. nov. uses GH1, GH3, and two novel glycosidases for cellulose hydrolysis. Frontiers in Microbiology 10, 2972. doi: 2910.3389/fmicb.2019. 02972.

Zhao, J., Wang, G., Chu, J., Zhuang, Y., 2019. Harnessing microbial metabolomics for industrial applications. World Journal of Microbiology and Biotechnology 36, 1.

Biogeochemistry

Bastviken, D., Nygren, J., Schenk, J., Parellada Massana, R., Duc, N.T., 2020. Technical note: Facilitating the use of low-cost methane (CH4) sensors in flux chambers – calibration, data processing, and an open source make-it-yourself logger. Biogeosciences Discussions 2020, 1-16.

Behera, P., Mohapatra, M., Kim, J.Y., Rastogi, G., 2020. Benthic archaeal community structure and carbon metabolic profiling of heterotrophic microbial communities in brackish sediments. Science of The Total Environment 706, 135709.

Bižić, M., Klintzsch, T., Ionescu, D., Hindiyeh, M.Y., Günthel, M., Muro-Pastor, A.M., Eckert, W., Urich, T., Keppler, F., Grossart, H.P., 2020. Aquatic and terrestrial cyanobacteria produce methane. Science Advances 6, eaax5343.

Chan, E.W., Shiller, A.M., Joung, D.J., Arrington, E.C., Valentine, D.L., Redmond, M.C., Breier, J.A., Socolofsky, S.A., Kessler, J.D., 2020. Investigations of aerobic methane oxidation in two marine seep environments: Part 2 - Isotopic kinetics. Journal of Geophysical Research: Oceans 124, 8392-8399.

Chen, G., Chen, D., Li, F., Liu, T., Zhao, Z., Cao, F., 2020. Dual nitrogen-oxygen isotopic analysis and kinetic model for enzymatic nitrate reduction coupled with Fe(II) oxidation by Pseudogulbenkiania sp. strain 2002. Chemical Geology 534, 119456.

Grandy, J.J., Onat, B., Tunnicliffe, V., Butterfield, D.A., Pawliszyn, J., 2020. Unique solid phase microextraction sampler reveals distinctive biogeochemical profiles among various deep-sea hydrothermal vents. Scientific Reports 10, 1360.

Herber, J., Klotz, F., Frommeyer, B., Weis, S., Straile, D., Kolar, A., Sikorski, J., Egert, M., Dannenmann, M., Pester, M., 2020. A single Thaumarchaeon drives nitrification in deep oligotrophic Lake Constance. Environmental Microbiology 22, 212-228.

Igarashi, K., Miyako, E., Kato, S., 2020. Direct interspecies electron transfer mediated by graphene oxide-based materials. Frontiers in Microbiology 10, 3068. doi: 3010.3389/fmicb.2019. 03068.

Janssen, D.J., Rickli, J., Quay, P.D., White, A.E., Nasemann, P., Jaccard, S.L., 2020. Biological control of chromium redox and stable isotope composition in the surface ocean. Global Biogeochemical Cycles 34, e2019GB006397.

Krause, J.W., Lomas, M.W., 2020. Understanding diatoms’ past and future biogeochemical role in high-latitude seas. Geophysical Research Letters 47, e2019GL085602.

Lang, S.Q., Brazelton, W.J., 2020. Habitability of the marine serpentinite subsurface: a case study of the Lost City hydrothermal field. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 378, 20180429.

Maßmig, M., Lüdke, J., Krahmann, G., Engel, A., 2020. Bacterial degradation activity in the eastern tropical South Pacific oxygen minimum zone. Biogeosciences 17, 215-230.

Mijnendonckx, K., Van Gompel, A., Coninx, I., Bleyen, N., Leys, N., 2020. Water-soluble bitumen degradation products can fuel nitrate reduction from non-radioactive bituminized waste. Applied Geochemistry 114, 104525.

Müller, H., Marozava, S., Probst, A.J., Meckenstock, R.U., 2020. Groundwater cable bacteria conserve energy by sulfur disproportionation. The ISME Journal 14, 623-634.

Philips, J., 2020. Extracellular electron uptake by acetogenic bacteria: Does H2 consumption favor the H2 evolution reaction on a cathode or metallic iron? Frontiers in Microbiology 10, 2997. doi: 2910.3389/fmicb.2019. 02997.

Su, C., Zhang, M., Lin, L., Yu, G., Zhong, H., Chong, Y., 2020. Reduction of iron oxides and microbial community composition in iron-rich soils with different organic carbon as electron donors. International Biodeterioration & Biodegradation 148, 104881.

Šupraha, L., Henderiks, J., 2020. A 15 million-year long record of phenotypic evolution in the heavily calcified coccolithophore Helicosphaera and its biogeochemical implications. Biogeosciences Discussions 2020, 1-26.

Taenzer, L., Carini, P.C., Masterson, A.M., Bourque, B., Gaube, J.H., Leavitt, W.D., 2020. Microbial methane from methylphosphonate isotopically records source. Geophysical Research Letters 47, e2019GL085872.

Tanioka, T., Matsumoto, K., 2020. Stability of marine organic matter respiration stoichiometry. Geophysical Research Letters 47, e2019GL085564.

Templeton, A.S., Ellison, E.T., 2020. Formation and loss of metastable brucite: does Fe(II)-bearing brucite support microbial activity in serpentinizing ecosystems? Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 378, 20180423.

Wei, S., Han, G., Chu, X., Song, W., He, W., Xia, J., Wu, H., 2020. Effect of tidal flooding on ecosystem CO2 and CH4 fluxes in a salt marsh in the Yellow River Delta. Estuarine, Coastal and Shelf Science 232, 106512.

Yu, Y., Yang, J., Zheng, L.-Y., Sheng, Q., Li, C.-Y., Wang, M., Zhang, X.-Y., McMinn, A., Zhang, Y.-Z., Song, X.-Y., Chen, X.-L., 2020. Diversity of D-amino acid utilizing bacteria from Kongsfjorden, Arctic and the metabolic pathways for seven D-amino acids. Frontiers in Microbiology 10, 2983. doi: 2910.3389/fmicb.2019. 02983.

Biofilm/Microbial Induced Corrosion

Ma, Y., Zhang, Y., Zhang, R., Guan, F., Hou, B., Duan, J., 2020. Microbiologically influenced corrosion of marine steels within the interaction between steel and biofilms: a brief view. Applied Microbiology and Biotechnology 104, 515-525.

Pillot, G., Davidson, S., Auria, R., Combet-Blanc, Y., Godfroy, A., Liebgott, P.-P., 2020. Production of current by syntrophy between exoelectrogenic and fermentative hyperthermophilic microorganisms in heterotrophic biofilm from a deep-sea hydrothermal chimney. Microbial Ecology 79, 38-49.

Microbial Mediation of Mineral Formation/Degradation

Al Disi, Z.A., Bontognali, T.R.R., Jaoua, S., Attia, E., Al-Kuwari, H.A.S., Zouari, N., 2019. Influence of temperature, salinity and Mg2+:Ca2+ ratio on microbially-mediated formation of Mg-rich carbonates by Virgibacillus strains isolated from a sabkha environment. Scientific Reports 9, 19633.

de Melo, R.D., Leão, P., Abreu, F., Acosta-Avalos, D., 2020. The swimming orientation of multicellular magnetotactic prokaryotes and uncultured magnetotactic cocci in magnetic fields similar to the geomagnetic field reveals differences in magnetotaxis between them. Antonie van Leeuwenhoek 113, 197-209.

Han, R., Lv, J., Huang, Z., Zhang, S., Zhang, S., 2019. Pathway for the production of hydroxyl radicals during the microbially mediated redox transformation of iron (oxyhydr)oxides. Environmental Science & Technology 54, 902-910.

Li, Q., Zhu, J., Li, S., Zhang, R., Xiao, T., Sand, W., 2020. Interactions between cells of Sulfobacillus thermosulfidooxidans and Leptospirillum ferriphilum during pyrite bioleaching. Frontiers in Microbiology 11, 44. doi: 10.3389/fmicb.2020. 00044.

Nielsen, S.D., Koren, K., Löbmann, K., Hinge, M., Scoma, A., Kjeldsen, K.U., Røy, H., 2020. Constraints on CaCO3 precipitation in superabsorbent polymer by aerobic bacteria. Applied Microbiology and Biotechnology 104, 365-375.

Pfeiffer, D., Schüler, D., 2020. Quantifying the benefit of a dedicated “magnetoskeleton” in bacterial magnetotaxis by live-cell motility tracking and soft agar swimming assay. Applied and Environmental Microbiology 86, e01976-01919.

Carbon Cycle

Boulila, S., Charbonnier, G., Spangenberg, J.E., Gardin, S., Galbrun, B., Briard, J., Le Callonnec, L., 2020. Unraveling short- and long-term carbon cycle variations during the Oceanic Anoxic Event 2 from the Paris Basin Chalk. Global and Planetary Change 186, 103126.

Fang, L., Lee, S., Lee, S.-A., Hahm, D., Kim, G., Druffel, E.R.M., Hwang, J., 2020. Removal of refractory dissolved organic carbon in the Amundsen Sea, Antarctica. Scientific Reports 10, 1213.

Rafter, P.A., Carriquiry, J.D., Herguera, J.-C., Hain, M.P., Solomon, E.A., Southon, J.R., 2019. Anomalous > 2000-year-old surface ocean radiocarbon age as evidence for deglacial geologic carbon release. Geophysical Research Letters 46, 13950-13960.

Rugenstein, J.K.C., 2020. What goes down must come up. Nature Geoscience 13, 5-7.

Sparkes, R.B., Hovius, N., Galy, A., Liu, J.T., 2020. Survival of graphitized petrogenic organic carbon through multiple erosional cycles. Earth and Planetary Science Letters 531, 115992.

Xiao, W., Xu, Y., Haghipour, N., Montluçon, D.B., Pan, B., Jia, Z., Ge, H., Yao, P., Eglinton, T.I., 2020. Efficient sequestration of terrigenous organic carbon in the New Britain Trench. Chemical Geology 533, 119446.

Zhang, X., Zhou, X., Hu, D., 2020. High-resolution paired carbon isotopic records from the Meishucun section in South China: Implications for carbon cycling and environmental changes during the Ediacaran-Cambrian transition. Precambrian Research 337, 105561.

Climate Change

Azevedo, V., Stríkis, N.M., Santos, R.A., de Souza, J.G., Ampuero, A., Cruz, F.W., de Oliveira, P., Iriarte, J., Stumpf, C.F., Vuille, M., Mendes, V.R., Cheng, H., Edwards, R.L., 2019. Medieval climate variability in the eastern Amazon-Cerrado regions and its archeological implications. Scientific Reports 9, 20306.

Halloran, P.R., Hall, I.R., Menary, M., Reynolds, D.J., Scourse, J.D., Screen, J.A., Bozzo, A., Dunstone, N., Phipps, S., Schurer, A.P., Sueyoshi, T., Zhou, T., Garry, F., 2020. Natural drivers of multidecadal Arctic sea ice variability over the last millennium. Scientific Reports 10, 688.

Vaks, A., Mason, A.J., Breitenbach, S.F.M., Kononov, A.M., Osinzev, A.V., Rosensaft, M., Borshevsky, A., Gutareva, O.S., Henderson, G.M., 2020. Palaeoclimate evidence of vulnerable permafrost during times of low sea ice. Nature 577, 221-225.

Carbon Sequestration

Alexandrov, G.A., Brovkin, V.A., Kleinen, T., Yu, Z., 2020. The capacity of northern peatlands for long-term carbon sequestration. Biogeosciences 17, 47-54.

Cao, F., Eskin, D., Leonenko, Y., 2020. Modeling of ex-situ dissolution for geologic sequestration of carbon dioxide in aquifers. Journal of Petroleum Science and Engineering 187, 106835.

Fakher, S., Imqam, A., 2020. Application of carbon dioxide injection in shale oil reservoirs for increasing oil recovery and carbon dioxide storage. Fuel 265, 116944.

Goodman, A., Sanguinito, S., Kutchko, B., Natesakhawat, S., Cvetic, P., Allen, A.J., 2020. Shale pore alteration: Potential implications for hydrocarbon extraction and CO2 storage. Fuel 265, 116930.

Hamby, H., Li, B., Shinopoulos, K.E., Keller, H.R., Elliott, S.J., Dukovic, G., 2020. Light-driven carbon−carbon bond formation via CO2 reduction catalyzed by complexes of CdS nanorods and a 2-oxoacid oxidoreductase. Proceedings of the National Academy of Sciences 117, 135-140.

Iyer, J., Chen, X., Carroll, S.A., 2020. Impact of chemical and mechanical processes on leakage from damaged wells in CO2 storage sites. Environmental Science & Technology 54, 1196-1203.

Li, F., Thevenon, A., Rosas-Hernández, A., Wang, Z., Li, Y., Gabardo, C.M., Ozden, A., Dinh, C.T., Li, J., Wang, Y., Edwards, J.P., Xu, Y., McCallum, C., Tao, L., Liang, Z.-Q., Luo, M., Wang, X., Li, H., O’Brien, C.P., Tan, C.-S., Nam, D.-H., Quintero-Bermudez, R., Zhuang, T.-T., Li, Y.C., Han, Z., Britt, R.D., Sinton, D., Agapie, T., Peters, J.C., Sargent, E.H., 2020. Molecular tuning of CO2-to-ethylene conversion. Nature 577, 509-513.

Li, J., Roche, B., Bull, J.M., White, P.R., Davis, J.W., Deponte, M., Gordini, E., Cotterle, D., 2020. Passive acoustic monitoring of a natural CO2 seep site – Implications for carbon capture and storage. International Journal of Greenhouse Gas Control 93, 102899.

Li, Y., Wang, Y., Wang, J., Pan, Z., 2020. Variation in permeability during CO2–CH4 displacement in coal seams: Part 1 – Experimental insights. Fuel 263, 116666.

Mahmoud, M., Hamza, A., Hussein, I.A., Eliebid, M., Kamal, M.S., Abouelresh, M., Shawabkeh, R., Al-Marri, M.J., 2020. Carbon dioxide EGR and sequestration in mature and immature shale: Adsorption study. Journal of Petroleum Science and Engineering 188, 106923.

Mahmoud, M., Hussein, I., Carchini, G., Shawabkeh, R., Eliebid, M., Al-Marri, M.J., 2019. Effect of rock mineralogy on Hot-CO2 injection for enhanced gas recovery. Journal of Natural Gas Science and Engineering 72, 103030.

Matsui, H., Jia, J., Tsuji, T., Liang, Y., Masuda, Y., 2020. Microsecond simulation study on the replacement of methane in methane hydrate by carbon dioxide, nitrogen, and carbon dioxide–nitrogen mixtures. Fuel 263, 116640.

Striolo, A., 2019. Clathrate hydrates: recent advances on CH4 and CO2 hydrates, and possible new frontiers. Molecular Physics 117, 3556-3568.

Zhou, J., Yang, K., Tian, S., Zhou, L., Xian, X., Jiang, Y., Liu, M., Cai, J., 2020. CO2-water-shale interaction induced shale microstructural alteration. Fuel 263, 116642.

Coal/Lignite/Peat Geochemistry


Dai, S., Bechtel, A., Eble, C.F., Flores, R.M., French, D., Graham, I.T., Hood, M.M., Hower, J.C., Korasidis, V.A., Moore, T.A., Püttmann, W., Wei, Q., Zhao, L., O'Keefe, J.M.K., 2020. Recognition of peat depositional environments in coal: A review. International Journal of Coal Geology 219, 103383.


Jiang, Y., Hu, H., Gluyas, J., Zhao, K., 2019. Distribution characteristics and accumulation model for the coal-formed gas generated from Permo-Carboniferous coal measures in Bohai Bay Basin, China: A review. Acta Geologica Sinica - English Edition 93, 1869-1884.

Jing, Z., Balucan, R.D., Underschultz, J.R., Pan, S., Steel, K.M., 2020. Chemical stimulation for enhancing coal seam permeability: Laboratory study into permeability variation and coal structure examination. International Journal of Coal Geology 219, 103375.

Li, K., Rimmer, S.M., Presswood, S.M., Liu, Q., 2020. Raman spectroscopy of intruded coals from the Illinois Basin: Correlation with rank and estimated alteration temperature. International Journal of Coal Geology 219, 103369.

Scott, A.C., Collinson, M.E., 2020. A note on the charring of spores and implications for coal petrographic analysis and maceral nomenclature. International Journal of Coal Geology 219, 103361.

Wang, Y., Lian, J., Xue, Y., Liu, P., Dai, B., Lin, H., Han, S., 2020. The pyrolysis of vitrinite and inertinite by a combination of quantum chemistry calculation and thermogravimetry-mass spectrometry. Fuel 264, 116794.

Zhang, Y.-Y., Wei, X.-Y., Lv, J.-H., Jiang, H., Liu, F.-J., Liu, G.-H., Zong, Z.-M., 2019. Characterization of nitrogen-containing aromatics in Baiyinhua lignite and its soluble portions from thermal dissolution. Chinese Journal of Chemical Engineering 27, 2783-2787.

Coal Bed Methane


Ghosh, A.K., Bandopadhyay, A.K., 2020. Formation of thermogenic gases with coalification: FTIR and DFT examination of vitrinite rich coals. International Journal of Coal Geology 219, 103379.

Guo, H., Chen, C., Liang, W., Zhang, Y., Duan, K., Zhang, P., 2020. Enhanced biomethane production from anthracite by application of an electric field. International Journal of Coal Geology 219, 103393.


Li, Y., Wang, Y., Wang, J., Pan, Z., 2020. Variation in permeability during CO2–CH4 displacement in coal seams: Part 1 – Experimental insights. Fuel 263, 116666.

Liu, S., Zhang, R., 2020. Anisotropic pore structure of shale and gas injection-induced nanopore alteration: A small-angle neutron scattering study. International Journal of Coal Geology 219, 103384.

Liu, X.-Q., Li, M., Zhang, C., Fang, R., Zhong, N., Xue, Y., Zhou, Y., Jiang, W., Chen, X.-Y., 2020. Mechanistic insight into the optimal recovery efficiency of CBM in sub-bituminous coal through molecular simulation. Fuel 266, 117137.

Liu, Z., Liu, D., Cai, Y., Yao, Y., Pan, Z., Zhou, Y., 2020. Application of nuclear magnetic resonance (NMR) in coalbed methane and shale reservoirs: A review. International Journal of Coal Geology 218, 103261.

Lupton, N., Connell, L.D., Heryanto, D., Sander, R., Camilleri, M., Down, D.I., Pan, Z., 2020. Enhancing biogenic methane generation in coalbed methane reservoirs – Core flooding experiments on coals at in-situ conditions. International Journal of Coal Geology 219, 103377.

Cosmochemistry/Planetary Geochemistry


Bellucci, J.J., Whitehouse, M.J., Nemchin, A.A., Snape, J.F., Kenny, G.G., Merle, R.E., Bland, P.A., Benedix, G.K., 2020. Tracing martian surface interactions with the triple O isotope compositions of meteoritic phosphates. Earth and Planetary Science Letters 531, 115977.

Bowling, T.J., Johnson, B.C., Marchi, S., De Sanctis, M.C., Castillo-Rogez, J.C., Raymond, C.A., 2020. An endogenic origin of cerean organics. Earth and Planetary Science Letters 534, 116069.

Cours, T., Cordier, D., Seignovert, B., Maltagliati, L., Biennier, L., 2020. The 3.4 μm absorption in Titan’s stratosphere: Contribution of ethane, propane, butane and complex hydrogenated organics. Icarus 339, 113571.

Farnsworth, K.K., Chevrier, V.F., Steckloff, J.K., Laxton, D., Singh, S., Soto, A., Soderblom, J.M., 2019. Nitrogen exsolution and bubble formation in Titan's lakes. Geophysical Research Letters 46, 13658-13667.

Gatchell, M., 2020. A new take on circumstellar carbon chemistry. Nature Astronomy 4, 21-22.

Gautier, T., Danger, G., Mousis, O., Duvernay, F., Vuitton, V., Flandinet, L., Thissen, R., Orthous-Daunay, F.R., Ruf, A., Chiavassa, T., d'Hendecourt, L.S., 2020. Laboratory experiments to unveil the molecular reactivity occurring during the processing of ices in the protosolar nebula. Earth and Planetary Science Letters 531, 116011.

Heard, A.W., Kite, E.S., 2020. A probabilistic case for a large missing carbon sink on Mars after 3.5 billion years ago. Earth and Planetary Science Letters 531, 116001.

Heck, P.R., Greer, J., Kööp, L., Trappitsch, R., Gyngard, F., Busemann, H., Maden, C., Ávila, J.N., Davis, A.M., Wieler, R., 2020. Lifetimes of interstellar dust from cosmic ray exposure ages of presolar silicon carbide. Proceedings of the National Academy of Sciences 117, 1884.

Hickman-Lewis, K., Foucher, F., Pelletier, S., Messori, F., Westall, F., 2020. Geological appraisals of core samples using the ExoMars 2020 rover instrumentation. Planetary and Space Science 180, 104743.

Kite, E.S., Mischna, M.A., Gao, P., Yung, Y.L., Turbet, M., 2020. Methane release on Early Mars by atmospheric collapse and atmospheric reinflation. Planetary and Space Science 181, 104820.

Lowe, D.R., Bishop, J.L., Loizeau, D., Wray, J.J., Beyer, R.A., 2019. Deposition of >3.7 Ga clay-rich strata of the Mawrth Vallis Group, Mars, in lacustrine, alluvial, and aeolian environments. GSA Bulletin 132, 17-30.

Maillard, J., Hupin, S., Carrasco, N., Schmitz-Afonso, I., Gautier, T., Afonso, C., 2020. Structural elucidation of soluble organic matter: Application to Titan's haze. Icarus 340, 113627.

Martínez, L., Santoro, G., Merino, P., Accolla, M., Lauwaet, K., Sobrado, J., Sabbah, H., Pelaez, R.J., Herrero, V.J., Tanarro, I., Agúndez, M., Martín-Jimenez, A., Otero, R., Ellis, G.J., Joblin, C., Cernicharo, J., Martín-Gago, J.A., 2020. Prevalence of non-aromatic carbonaceous molecules in the inner regions of circumstellar envelopes. Nature Astronomy 4, 97-105.

Tarnas, J.D., Mustard, J.F., Lin, H., Goudge, T.A., Amador, E.S., Bramble, M.S., Kremer, C.H., Zhang, X., Itoh, Y., Parente, M., 2019. Orbital identification of hydrated silica in Jezero crater, Mars. Geophysical Research Letters 46, 12771-12782.

Theulé, P., Endres, C., Hermanns, M., Bossa, J.-B., Potapov, A., 2020. High-resolution gas phase spectroscopy of molecules desorbed from an ice surface: A proof-of-principle study. ACS Earth and Space Chemistry 4, 86-91.

Vaz, E., Penfound, E., 2020. Mars terraforming: A geographic information systems framework. Life Sciences in Space Research 24, 50-63.

Voosen, P., 2020. Planetary turmoil unleashed during Solar System infancy. Science 367, 350-351.

Zubrin, R., 2020. Exchange of material between solar systems by random stellar encounters. International Journal of Astrobiology 19, 43-48.

Astrobiology

Billi, D., Mosca, C., Fagliarone, C., Napoli, A., Verseux, C., Baqué, M., de Vera, J.-P., 2020. Exposure to low Earth orbit of an extreme-tolerant cyanobacterium as a contribution to lunar astrobiology activities. International Journal of Astrobiology 19, 53-60.

Bryanskaya, A.V., Berezhnoy, A.A., Rozanov, A.S., Serdyukov, D.S., Malup, T.K., Peltek, S.E., 2020. Survival of halophiles of Altai lakes under extreme environmental conditions: implications for the search for Martian life. International Journal of Astrobiology 19, 1-15.

Chon-Torres, O.A., 2020. Astrobioethics: a brief discussion from the epistemological, religious and societal dimension. International Journal of Astrobiology 19, 61-67.

Chon-Torres, O.A., 2020. Moral challenges of going to Mars under the presence of non-intelligent life scenario. International Journal of Astrobiology 19, 49-52.

DasSarma, S., DasSarma, P., Laye, V.J., Schwieterman, E.W., 2020. Extremophilic models for astrobiology: haloarchaeal survival strategies and pigments for remote sensing. Extremophiles 24, 31-41.

Lam, B.R., Barge, L.M., Noell, A.C., Nealson, K.H., 2019. Detecting endogenous microbial metabolism and differentiating between abiotic and biotic signals observed by bioelectrochemical systems in soils. Astrobiology 20, 39-52.

Li, Y., Talalay, P.G., Sysoev, M.A., Zagorodnov, V.S., Li, X., Fan, X., 2020. Thermal heads for melt drilling to subglacial lakes: Design and testing. Astrobiology 20, 142-156.

Maus, D., Heinz, J., Schirmack, J., Airo, A., Kounaves, S.P., Wagner, D., Schulze-Makuch, D., 2020. Methanogenic Archaea can produce methane in deliquescence-driven Mars analog environments. Scientific Reports 10, 6.

Mello, F.d.S., Friaça, A.C.S., 2020. The end of life on Earth is not the end of the world: converging to an estimate of life span of the biosphere? International Journal of Astrobiology 19, 25-42.

Nelson, J.P., 2020. Mythic forecasts: researcher portrayals of extraterrestrial life discovery. International Journal of Astrobiology 19, 16-24.

Pandey, S., Clarke, J., Nema, P., Bonaccorsi, R., Som, S., Sharma, M., Phartiyal, B., Rajamani, S., Mogul, R., Martin-Torres, J., Vaishampayan, P., Blank, J., Steller, L., Srivastava, A., Singh, R., McGuirk, S., Zorzano, M.-P., Güttler, J.M., Mendaza, T., Soria-Salinas, A., Ahmad, S., Ansari, A., Singh, V.K., Mungi, C., Bapat, N., 2020. Ladakh: diverse, high-altitude extreme environments for off-earth analogue and astrobiology research. International Journal of Astrobiology 19, 78-98.

Preston, L.J., Barcenilla, R., Dartnell, L.R., Kucukkilic-Stephens, E., Olsson-Francis, K., 2019. Infrared spectroscopic detection of biosignatures at Lake Tírez, Spain: Implications for Mars. Astrobiology 20, 15-25.

Quarles, B., Barnes, J.W., Lissauer, J.J., Chambers, J., 2019. Obliquity evolution of the potentially habitable exoplanet Kepler-62f. Astrobiology 20, 73-90.

Senatore, G., Mastroleo, F., Leys, N., Mauriello, G., 2020. Growth of Lactobacillus reuteri DSM17938 under two simulated microgravity systems: Changes in reuterin production, gastrointestinal passage resistance, and stress genes expression response. Astrobiology 20, 1-14.

Stevenson, D.S., 2020. Phytoclimatic mapping of exoplanets. International Journal of Astrobiology 19, 68-77.

Tan, J., Sephton, M.A., 2019. Organic records of early life on Mars: The role of iron, burial, and kinetics on preservation. Astrobiology 20, 53-72.

von Hegner, I., 2020. Extremophiles: a special or general case in the search for extra-terrestrial life? Extremophiles 24, 167-175.

Environmental Geochemistry

Buzmakov, S.A., Khotyanovskaya, Y.V., 2020. Degradation and pollution of lands under the influence of oil resources exploitation. Applied Geochemistry 113, 104443.

Dijkstra, N., Junttila, J., Aagaard-Sørensen, S., 2020. Impact of drill cutting releases on benthic foraminifera at three exploration wells drilled between 1992 and 2012 in the SW Barents Sea, Norway. Marine Pollution Bulletin 150, 110784.

Dix, B., de Bruin, J., Roosenbrand, E., Vlemmix, T., Francoeur, C., Gorchov-Negron, A., McDonald, B., Zhizhin, M., Elvidge, C., Veefkind, P., Levelt, P., de Gouw, J., 2020. Nitrogen oxide emissions from U.S. Oil and gas production: Recent trends and source attribution. Geophysical Research Letters 47, e2019GL085866.

Drake, P., 2020. Comment to “More than ten years of Lusi: A review of facts, coincidences, and past and future studies” by Miller and Mazzini (2018): Taking the trigger debate above ground. Marine and Petroleum Geology 113, 104079.

de Gouw, J.A., Veefkind, J.P., Roosenbrand, E., Dix, B., Lin, J.C., Landgraf, J., Levelt, P.F., 2020. Daily satellite observations of methane from oil and gas production regions in the United States. Scientific Reports 10, 1379.

Escher, B.I., Abagyan, R., Embry, M., Klüver, N., Redman, A.D., Zarfl, C., Parkerton, T.F., 2020. Recommendations for improving methods and models for aquatic hazard assessment of ionizable organic chemicals. Environmental Toxicology and Chemistry 39, 269-286.

Escher, B.I., Stapleton, H.M., Schymanski, E.L., 2020. Tracking complex mixtures of chemicals in our changing environment. Science 367, 388-392.

Fernandes, C., Khandeparker, R.D.S., Shenoy, B.D., 2020. High abundance of Vibrio in tarball-contaminated seawater from Vagator beach, Goa, India. Marine Pollution Bulletin 150, 110773.

Gdara, I., Zrafi, I., Balducci, C., Cecinato, A., Ghrabi, A., 2020. First investigation of seasonal concentration behaviors and sources assessment of aliphatic hydrocarbon in waters and sediments from Wadi El Bey, Tunisia. Archives of Environmental Contamination and Toxicology 78, 1-19.

Gunsch, M.J., Liu, J., Moffett, C.E., Sheesley, R.J., Wang, N., Zhang, Q., Watson, T.B., Pratt, K.A., 2020. Diesel soot and amine-containing organic sulfate aerosols in an Arctic oil field. Environmental Science & Technology 54, 92-101.

Johannessen, S.C., Greer, C.W., Hannah, C.G., King, T.L., Lee, K., Pawlowicz, R., Wright, C.A., 2020. Fate of diluted bitumen spilled in the coastal waters of British Columbia, Canada. Marine Pollution Bulletin 150, 110691.

Kwok, H., Yan, J., Brunswick, P., McMaster, M., Evans, M., Kim, M., Helbing, C., van Aggelen, G., Shang, D., 2020. Ultra trace simultaneous determination of 50 polycyclic aromatic hydrocarbons in biota using pMRM GC-MS/MS. Environmental Forensics 21, 87-98.

Peng, C., Tang, Y., Yang, H., He, Y., Liu, Y., Liu, D., Qian, Y., Lu, L., 2020. Time- and compound-dependent microbial community compositions and oil hydrocarbon degrading activities in seawater near the Chinese Zhoushan Archipelago. Marine Pollution Bulletin 152, 110907.

Phillips, E., Gilevska, T., Horst, A., Manna, J., Seger, E., Lutz, E.J., Norcross, S., Morgan, S.A., West, K.A., Mack, E.E., Dworatzek, S., Webb, J., Sherwood Lollar, B., 2020. Transformation of chlorofluorocarbons investigated via stable carbon compound-specific isotope analysis. Environmental Science & Technology 54, 870-878.

Qiao, W., Puentes Jácome, L.A., Tang, X., Lomheim, L., Yang, M.I., Gaspard, S., Avanzi, I.R., Wu, J., Ye, S., Edwards, E.A., 2020. Microbial communities associated with sustained anaerobic reductive dechlorination of α-, β-, γ-, and δ-hexachlorocyclohexane isomers to monochlorobenzene and benzene. Environmental Science & Technology 54, 255-265.

Ramírez, D., Vega-Alvarado, L., Taboada, B., Estradas-Romero, A., Soto, L., Juárez, K., 2020. Bacterial diversity in surface sediments from the continental shelf and slope of the North West Gulf of Mexico and the presence of hydrocarbon degrading bacteria. Marine Pollution Bulletin 150, 110590.

Roebuck, J.A., Seidel, M., Dittmar, T., Jaffé, R., 2020. Controls of land use and the river continuum concept on dissolved organic matter composition in an anthropogenically disturbed subtropical watershed. Environmental Science & Technology 54, 195-206.

Saint-Vincent, P.M.B., Pekney, N.J., 2020. Beyond-the-meter: Unaccounted sources of methane emissions in the natural gas distribution sector. Environmental Science & Technology 54, 39-49.

van Mourik, L.M., Lava, R., O'Brien, J., Leonards, P.E.G., de Boer, J., Ricci, M., 2020. The underlying challenges that arise when analysing short-chain chlorinated paraffins in environmental matrices. Journal of Chromatography A 1610, 460550.

Vila, J., Tian, Z., Wang, H., Bodnar, W., Aitken, M.D., 2020. Isomer-selective biodegradation of high-molecular-weight azaarenes in PAH-contaminated environmental samples. Science of The Total Environment 707, 135503.

Wang, H., Ge, D., Cheng, Z., Zhu, N., Yuan, H., Lou, Z., 2020. Improved understanding of dissolved organic matter transformation in concentrated leachate induced by hydroxyl radicals and reactive chlorine species. Journal of Hazardous Materials 397, 121702.

Wang, H., Li, H., Sun, K., Huang, H., Zhu, P., Lu, Z., 2020. Impact of exogenous nitrogen on the cyanobacterial abundance and community in oil-contaminated sediment: A microcosm study. Science of The Total Environment 710, 136296.

Wisen, J., Chesnaux, R., Werring, J., Wendling, G., Baudron, P., Barbecot, F., 2020. A portrait of wellbore leakage in northeastern British Columbia, Canada. Proceedings of the National Academy of Sciences 117, 913-922.

Xu, P., Du, H., Peng, X., Tang, Y., Zhou, Y., Chen, X., Fei, J., Meng, Y., Yuan, L., 2020. Degradation of several polycyclic aromatic hydrocarbons by laccase in reverse micelle system. Science of The Total Environment 708, 134970.

Yu, K., Duan, Y., Gan, Y., Zhang, Y., Zhao, K., 2020. Anthropogenic influences on dissolved organic matter transport in high arsenic groundwater: Insights from stable carbon isotope analysis and electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Science of The Total Environment 708, 135162.

Yu, X., Millet, D.B., Wells, K.C., Griffis, T.J., Chen, X., Baker, J.M., Conley, S.A., Smith, M.L., Gvakharia, A., Kort, E.A., Plant, G., Wood, J.D., 2020. Top-down constraints on methane point source emissions from animal agriculture and waste based on new airborne measurements in the U.S. Upper Midwest. Journal of Geophysical Research: Biogeosciences 125, e2019JG005429.

Zhan, S., Wu, J., Wang, J., Jing, M., 2020. Distribution characteristics, sources identification and risk assessment of n-alkanes and heavy metals in surface sediments, Tajikistan, Central Asia. Science of The Total Environment 709, 136278.

Bioremediation

Bera, G., Doyle, S., Passow, U., Kamalanathan, M., Wade, T.L., Sylvan, J.B., Sericano, J.L., Gold, G., Quigg, A., Knap, A.H., 2020. Biological response to dissolved versus dispersed oil. Marine Pollution Bulletin 150, 110713.

Cao, H., Wang, C., Liu, H., Jia, W., Sun, H., 2020. Enzyme activities during benzo[a]pyrene degradation by the fungus Lasiodiplodia theobromae isolated from a polluted soil. Scientific Reports 10, 865.

Cerqueda-García, D., García-Maldonado, J.Q., Aguirre-Macedo, L., García-Cruz, U., 2020. A succession of marine bacterial communities in batch reactor experiments during the degradation of five different petroleum types. Marine Pollution Bulletin 150, 110775.

Ibrahim, I.M., Konnova, S.A., Sigida, E.N., Lyubun, E.V., Muratova, A.Y., Fedonenko, Y.P., Elbanna, К., 2020. Bioremediation potential of a halophilic Halobacillus sp. strain, EG1HP4QL: exopolysaccharide production, crude oil degradation, and heavy metal tolerance. Extremophiles 24, 157-166.

Kreling, N.E., Zaparoli, M., Margarites, A.C., Friedrich, M.T., Thomé, A., Colla, L.M., 2020. Extracellular biosurfactants from yeast and soil–biodiesel interactions during bioremediation. International Journal of Environmental Science and Technology 17, 395-408.

Liu, Y., Wang, W., Shah, S.B., Zanaroli, G., Xu, P., Tang, H., 2020. Phenol biodegradation by Acinetobacter radioresistens APH1 and its application in soil bioremediation. Applied Microbiology and Biotechnology 104, 427-437.

Phillips, E., Gilevska, T., Horst, A., Manna, J., Seger, E., Lutz, E.J., Norcross, S., Morgan, S.A., West, K.A., Mack, E.E., Dworatzek, S., Webb, J., Sherwood Lollar, B., 2020. Transformation of chlorofluorocarbons investigated via stable carbon compound-specific isotope analysis. Environmental Science & Technology 54, 870-878.

Qiao, W., Puentes Jácome, L.A., Tang, X., Lomheim, L., Yang, M.I., Gaspard, S., Avanzi, I.R., Wu, J., Ye, S., Edwards, E.A., 2020. Microbial communities associated with sustained anaerobic reductive dechlorination of α-, β-, γ-, and δ-hexachlorocyclohexane isomers to monochlorobenzene and benzene. Environmental Science & Technology 54, 255-265.

Þorsteinsdóttir, G.V., Blischke, A., Sigurbjörnsdóttir, M.A., Òskarsson, F., Arnarson, Þ.S., Magnússon, K.P., Vilhelmsson, O., 2019. Gas seepage pockmark microbiomes suggest the presence of sedimentary coal seams in the Öxarfjörður graben of northeastern Iceland. Canadian Journal of Microbiology 66, 25-38.

Shi, D., Bera, G., Knap, A.H., Quigg, A., Al Atwah, I., Gold-Bouchot, G., Wade, T.L., 2020. A mesocosm experiment to determine half-lives of individual hydrocarbons in simulated oil spill scenarios with and without the dispersant, Corexit. Marine Pollution Bulletin 151, 110804.

Vasilyeva, G., Kondrashina, V., Strijakova, E., Ortega-Calvo, J.-J., 2020. Adsorptive bioremediation of soil highly contaminated with crude oil. Science of The Total Environment 706, 135739.

Wang, C., He, S., Zou, Y., Liu, J., Zhao, R., Yin, X., Zhang, H., Li, Y., 2020. Quantitative evaluation of in-situ bioremediation of compound pollution of oil and heavy metal in sediments from the Bohai Sea, China. Marine Pollution Bulletin 150, 110787.

Deepwater Horizon/Macondo/Other Oil Spills

Bargar, T.A., Stout, S.A., Alvarez, D., 2020. Petroleum hydrocarbons in semipermeable membrane devices deployed in the Northern Gulf of Mexico and Florida keys following the Deepwater Horizon incident. Marine Pollution Bulletin 150, 110622.

Chen, L., Yang, J., Wu, L., 2020. Modeling the dispersion of dissolved natural gas condensates from the Sanchi incident. Journal of Geophysical Research: Oceans 124, 8439-8454.

Ferguson, A., Solo-Gabriele, H., Mena, K., 2020. Assessment for oil spill chemicals: Current knowledge, da

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