william a. lefeverand andrew j. wommack* a l k y l a ti v ... · k 9.786 9.816 l...

1
430-480 nm 1200 mW cm -2 Modeled from PDB ID: 1RKK HPU Department of Chemistry R&D Department, Ameritox Society for Redox Biology and Medicine HPU Office of Undergraduate Research and Creative Works WFU Center for Redox Biology and Medicine WFU Center for Molecular Communication and Signaling Synthesis and Evaluation of the Unique Antimicrobial Peptide Polyphemusin-1 William A. LeFever and Andrew J. Wommack* Department of Chemistry, High Point University Background: Acknowledgements: 1) Miyata, T.; et al. Antimicrobial Peptides, Isolated from Horseshoe Crab Hemocytes, Tachyplesin II, and Polyphemusins I and II: Chemical Structures and Biological Activity. J. Biochem. 1989, 106, 663–668. 2) Hancock R. E. W.; The antimicrobial peptide polyphemusin localizes to the cytoplasm of Escherichia coli following treatment. Antimicrob. Agents Chemother. 2006, 50, 1522–1524. 3) Simon, M. D.; et al. Rapid flow-based pepetide synthesis, Chembiochem. 2014, 15, 713-720 4) Tam, J. P.; et al. J. Am. Chem. Soc.1991,113,6657–6662. . 5) Hoyle, C. E.; Bowman, C. N. Thiol–Ene Click Chemistry. Angew. Chem. Int. Ed. 2010, 49, 1540–1573. Polyphemusin-1 (PM1) is a cationic antimicrobial peptide from Limulus polyphemus, the American horseshoe crab. 1 The main structural motif of native PM1 is a β-hairpin turn produced by two intramolecular disulfide bonds, granting PM1 high antimicrobial activity against Gram-negative bacteria. 2 The importance of reversible disulfide bridging to PM1 activity can be determined by synthetically replacing disulfide bonds that participate in the β-hairpin turn on native PM1. Permanently reduced derivatives of PM1 were synthesized by replacing each cysteine in the sequence with alanine to prevent disulfide bridging and the β-hairpin turn. Photoredox-catalyzed TEC was performed on a truncated PM1 derivative containing a free thiol and a vinyl carbon to form an inert thioether coupling mimicking the native disulfide bridge. Figure 1: Native PM1 oxidized (left) and reduced (right) structures Solid Phase Peptide Synthesis: Figure 3: General description of the preparation of each PM1 derivative through Fmoc-SPPS 3 Disulfide bridges were induced on synthetic native PM1 analogs by dissolving pure peptide in .1% acetic acid with 5% DMSO. 4 FLOW Chemistry SPPS Reactor Body 3-min/coupling!!! Characterization TEC Coupling Reaction (A) crude native PM1 pre-oxidation. (B) pure native PM1 pre-oxidation. (C) crude oxidized PM1. (D) pure oxidized native PM1. (E) crude truncated native PM1 pre-oxidation. (F) pure truncated native PM1 pre- oxidation. (G) crude oxidized truncated native PM1. (H) pure oxidized truncated native PM1. (I) crude PM1-alanine. (J) pure PM1-alanine. (K) crude truncated PM1-alanine. (L) pure truncated PM1-alanine. Ru 2+ photoredox catalysis, followed by alkylative quench 1) Ru(bpy) 3 Cl 2 (0.50 mol%) p-toluidine (0.50 equiv) 20 mM NaOAc, pH 5.1, (0.10 mM) 452 nm, Blue LEDs HS S I O NH 2 (>50 equiv) 5 min, then pH <4.0 S NH 2 O NOT OBSERVED by LC-MS RCFGRY vinylGlyV RCFGRY vinylGlyV RCFGRY vinylGlyV Starting b -turn model peptide from polyphemusin-1 91% Yield 2) 75 mM HEPES, pH 8.0, 23 °C, 30 min entry yield a,b substrate sequence 1 91 (2, 3, 0) RCFGRY vinylGlyV 2 84 (6, 3, 0) 3 51 (12, 15, 20) 4 78 (5, 4, 9) 5 72 (8, 6, 11) 6 74 (6, 5, 10) KCFGRY vinylGlyV 7 71 (2, 3, 8) ECFGRY vinylGlyV ACFGRYvinylGlyV ICFGRY vinylGlyV VCFGRYvinylGlyV VCWGRYvinylGlyV Figure 6: Example installation of the redox-inert disulfide on vG-PM1 Conclusions and Future Work Native-PM1-red crude Observed m/z [M+3H] = 817.3 [M+4H] = 613.1 Expected: 820.7/615.5 Native PM1-red pure Observed m/z [M+3H] = 818.5 [M+4H] = 613.9 Expected: 820.7/615.5 Native PM1-ox pure Observed m/z [M+3H] = 817.1 [M+4H] = 613.1 Expected: 819.7/614.5 PM1-red-frag crude Observed m/z [M+2H] = 582.9 Expected: 584.2 PM1-red-frag pure Observed m/z [M+2H] = 582.9 Expected: 584.2 PM1-ox-frag pure Observed m/z [M+2H] = 581.6 Expected: 583.2 Ala-PM1 crude Observed m/z [M+3H] = 776.1 [M+4H] = 582.4 Expected: 777.9/583.7 Ala-PM1 pure Observed m/z [M+3H] = 776.1 [M+4H] = 582.4 Expected: 777.9/583.7 Ala-PM1-frag crude Observed m/z [M+2H] = 551.0 Expected: 552.13 Ala-PM1-frag pure Observed m/z [M+2H] = 550.7 Expected: 552.13 vG-PM1 frag pure Observed m/z [M+2H] = 659.3 [M+3H] = 440.0 Oxidized PM1 frag pure 11.427 11.109 10.433 A Native PM1 B C D 10.422 E F G H 10.219 10.261 10.640 Figure 7: MS and HPLC characterization of purified vinylglycine substituted PM1 derivative after photocatalyzed TEC coupling. RRWC FRVC YRGFC YRKC R VC YRGFC YR RRWA FRVA YRGFA YRKA R VA YRGFA YR RRWvG FRVvG YRGFC YRKC R VvG YRGFC YR Figure 2: PM1 sequences and cysteine replacements 10.849 I 10.800 J 10.638 K 9.786 9.816 L Photoredox-catalyzed TEC will be performed on a full length PM1 derivative containing vinylglycine residues and tested for antimicrobial activity 4 . RRWvGFRVvGYRGFCYRKCR Figure 4: HPLC traces and MS of crude and purified native PM1. Figure 5: Synthetic route to Fmoc-vinylglycine from Fmoc-Met-OH 5 FmocHN O O CH 3 H S CH 3 FmocHN O OH H S CH 3 HOBt (1.1 equiv) HBTU (1.05 equiv) DIPEA (2.0 equiv) DMF (0.40 M) MeOH (3.0 M) 23 °C, 1 h O O CH 3 H S CH 3 FmocHN O MeOH/MeCN (1:1, 0.50 M) 0 °C ® 23 °C 12 h 0.25 M KIO 4 (1.1 equiv) 18 h, reflux xylenes FmocHN O O CH 3 H 81% isolated yield 1 M HCl, HOAc, reflux, 1 h Fmoc-VinylGly-OH FmocHN O O H H Fmoc-Met-OH O O CH 3 H S CH 3 FmocHN O H Antimicrobial assays will be run in collaboration with the Blackledge Lab at HPU to determine minimum inhibitory concentration (MIC) values for each PM1 derivative.

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Page 1: William A. LeFeverand Andrew J. Wommack* a l k y l a ti v ... · K 9.786 9.816 L Photoredox-catalyzed TEC will be performed on a full length PM1 derivative containing vinylglycine

430-480 nm1200 mW cm-2

Modeled from PDB ID: 1RKK

HPU Department of Chemistry

R&D Department, Ameritox

Society for Redox Biology and Medicine

HPU Office of Undergraduate Research and Creative Works

WFU Center for Redox Biology and Medicine

WFU Center for Molecular Communication and Signaling

Synthesis and Evaluation of the Unique Antimicrobial Peptide Polyphemusin-1William A. LeFever and Andrew J. Wommack*

Department of Chemistry, High Point University

Background:

Acknowledgements:

1) Miyata, T.; et al. Antimicrobial Peptides, Isolated from Horseshoe Crab Hemocytes, Tachyplesin II, and Polyphemusins I and II: Chemical Structures and Biological Activity. J. Biochem. 1989, 106, 663–668. 2) Hancock R. E. W.; The antimicrobial peptide polyphemusin localizes to the cytoplasm of Escherichia coli following treatment. Antimicrob. Agents

Chemother. 2006, 50, 1522–1524. 3) Simon, M. D.; et al. Rapid flow-based pepetide synthesis, Chembiochem. 2014, 15, 713-720 4) Tam, J. P.; et al. J. Am. Chem. Soc.1991,113,6657–6662. . 5) Hoyle, C. E.; Bowman, C. N. Thiol–Ene Click Chemistry. Angew. Chem. Int. Ed. 2010, 49, 1540–1573.

◆ Polyphemusin-1 (PM1) is a cationic antimicrobial peptide fromLimulus polyphemus, the American horseshoe crab.1

◆ The main structural motif of native PM1 is a β-hairpin turnproduced by two intramolecular disulfide bonds, granting PM1high antimicrobial activity against Gram-negative bacteria. 2

◆ The importance of reversible disulfide bridging to PM1 activitycan be determined by synthetically replacing disulfide bondsthat participate in the β-hairpin turn on native PM1.

◆ Permanently reduced derivatives of PM1 were synthesized byreplacing each cysteine in the sequence with alanine to preventdisulfide bridging and the β-hairpin turn.

◆ Photoredox-catalyzed TEC was performed on a truncated PM1derivative containing a free thiol and a vinyl carbon to form aninert thioether coupling mimicking the native disulfide bridge.

Figure 1: Native PM1 oxidized (left) and reduced (right) structures

Solid Phase Peptide Synthesis:

Figure 3: General description of the preparation of each PM1 derivative through Fmoc-SPPS 3

Disulfide bridges were induced on synthetic native PM1 analogs by dissolving pure peptide in .1% acetic acid with 5% DMSO.4

FLOW ChemistrySPPS Reactor Body

3-min/coupling!!!

Characterization TEC Coupling Reaction

(A) crude native PM1 pre-oxidation. (B) pure native PM1 pre-oxidation.(C) crude oxidized PM1. (D) pure oxidized native PM1. (E) crudetruncated native PM1 pre-oxidation. (F) pure truncated native PM1 pre-oxidation. (G) crude oxidized truncated native PM1. (H) pure oxidizedtruncated native PM1. (I) crude PM1-alanine. (J) pure PM1-alanine.(K) crude truncated PM1-alanine. (L) pure truncated PM1-alanine.

Ru2+ photoredox

catalysis, followed by

alkylative quench

1) Ru(bpy)3Cl2 (0.50 mol%)p-toluidine (0.50 equiv)

20 mM NaOAc, pH 5.1, (0.10 mM)

452 nm, Blue LEDs

HSS

I

O

NH2

(>50 equiv)

5 min, then pH <4.0

S

NH2

O

NOT OBSERVEDby LC-MS

RCFGRYvinylGlyV RCFGRYvinylGlyV

RCFGRYvinylGlyV

Starting b-turn model peptidefrom polyphemusin-1

91% Yield

2) 75 mM HEPES, pH 8.0,

23 °C, 30 min

entry yielda,bsubstrate sequence

1 91 (2, 3, 0)RCFGRYvinylGlyV

2 84 (6, 3, 0)

3 51 (12, 15, 20)

4 78 (5, 4, 9)

5 72 (8, 6, 11)

6 74 (6, 5, 10)

KCFGRYvinylGlyV

7 71 (2, 3, 8)

ECFGRYvinylGlyV

ACFGRYvinylGlyV

ICFGRYvinylGlyV

VCFGRYvinylGlyV

VCWGRYvinylGlyV

Figure 6: Example installation of the redox-inert disulfide on vG-PM1

Conclusions and Future Work

Native-PM1-red crudeObserved m/z[M+3H] = 817.3[M+4H] = 613.1Expected: 820.7/615.5

Native PM1-red pureObserved m/z[M+3H] = 818.5[M+4H] = 613.9Expected: 820.7/615.5

Native PM1-ox pureObserved m/z[M+3H] = 817.1[M+4H] = 613.1Expected: 819.7/614.5

PM1-red-frag crudeObserved m/z[M+2H] = 582.9Expected: 584.2

PM1-red-frag pureObserved m/z[M+2H] = 582.9Expected: 584.2

PM1-ox-frag pureObserved m/z[M+2H] = 581.6Expected: 583.2

Ala-PM1 crudeObserved m/z[M+3H] = 776.1[M+4H] = 582.4Expected: 777.9/583.7

Ala-PM1 pureObserved m/z[M+3H] = 776.1[M+4H] = 582.4Expected: 777.9/583.7

Ala-PM1-frag crudeObserved m/z[M+2H] = 551.0Expected: 552.13

Ala-PM1-frag pureObserved m/z[M+2H] = 550.7Expected: 552.13

vG-PM1 frag pureObserved m/z[M+2H] = 659.3[M+3H] = 440.0

Oxidized PM1 frag pure

11.427

11.109

10.433

A

Native PM1

B

C

D 10.422

E

F

G

H

10.219

10.261

10.640

Figure 7: MS and HPLC characterization of purified vinylglycinesubstituted PM1 derivative after photocatalyzed TEC coupling.

RRWCFRVCYRGFCYRKCRVCYRGFCYR

RRWAFRVAYRGFAYRKARVAYRGFAYR

RRWvGFRVvGYRGFCYRKCRVvGYRGFCYR

Figure 2: PM1 sequences and cysteine replacements

10.849

I10.800

J10.638

K 9.786

9.816L

◆ Photoredox-catalyzed TEC will be performed on a full length PM1derivative containing vinylglycine residues and tested forantimicrobial activity4. RRWvGFRVvGYRGFCYRKCR

Figure 4: HPLC traces and MS of crude and purified native PM1.

Figure 5: Synthetic route to Fmoc-vinylglycine from Fmoc-Met-OH5

FmocHN

O

OCH3

H

SCH3

FmocHN

O

OHH

SCH3

HOBt (1.1 equiv)HBTU (1.05 equiv)DIPEA (2.0 equiv)

DMF (0.40 M)MeOH (3.0 M)

23 °C, 1 h O

OCH3

H

SCH3

FmocHN

O

MeOH/MeCN(1:1, 0.50 M)0 °C ® 23 °C

12 h

0.25 M KIO4 (1.1 equiv)

18 h, refluxxylenes

FmocHN

O

OCH3

H

81% isolated yield

1 M HCl,HOAc,

reflux, 1 h

Fmoc-VinylGly-OH

FmocHN

O

OH

H

Fmoc-Met-OH

O

OCH3

H

SCH3

FmocHN

O

H

◆ Antimicrobial assays will berun in collaboration with theBlackledge Lab at HPU todetermine minimum inhibitoryconcentration (MIC) values foreach PM1 derivative.