wood decay fungi in hornbill nest cavities in khao yai...
TRANSCRIPT
95
THE RAFFLES BULLETIN OF ZOOLOGY 2011
WOOD DECAY FUNGI IN HORNBILL NEST CAVITIES IN KHAO YAI NATIONAL PARK, THAILAND
Sirirak Supa-AmornkulDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand
Suthep WiyakruttaDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand
Pilai Poonswad*Department of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand
E-mail:[email protected] (*Corresponding author)
ABSTRACT. – We investigated the abundance and species diversity of wood decay fungi inside and outside cavities of predominant hornbill nest trees, Dipterocarpus gracilis and Cleistocalyx nervosum and compared with those of Balakata baccata, which is known as non-nest tree for lack of cavity, in a moist evergreen forest of Khao Yai National Park, Thailand. We also examined the abundance of cavities in these tree sampled from wild population. Wood samples were collected twice yearly, once in dry and the other in wet season, from inside and outside the cavities of 10 D. gracilis trees, 10 C. nervosum trees, and 6 B. baccata trees. Additional dead wood of Dipterocarpus and Cleistocalyx was collected in dry season to determine true wood decay fungi. A total of 1,199 fungal isolates were obtained and were classifi ed to 68 species, 52 genera, 33 families, and 4 phyla The number of isolates was signifi cantly higher from inside than outside the cavities and in wet season than in dry season, particularly the isolates from Dipterocarpus indicating wet season provides optimal condition for fungi. Cleistocalyx hosted the highest species richness, i.e. 51 species (75%). Forty species (58.8%) were identifi ed from Dipterocarpus, and as expected the lowest was from Balakata, with only 16 species (23.5%). Eight species (11.8%) were found in common among all trees studied while 10, 20 and 4 species were exclusively isolated from the respective trees. Simpson’s and Shannon-Weiner indices were used to determine fungal species diversity. In dry season, Dipterocarpus hosted the highest diversity according to Simpson’s index, while Cleistocalyx had the lowest diversity, as demonstrated by both indices, in fungal species. Unexpectedly, wood decay fungi were dominated by soft rot fungi (91.2%) but not white rot (5.9%). The most common soft rot fungi were Trichoderma sp., Gliocladium sp. and Fusarium sp., and the white rot were Coprinus sp. and Sporotrichum sp. The present study suggested that wet season and enclosure condition such as inside the cavity infl uence the abundance and species richness. Other than moisture, additional conditions inside the cavity that may enhance the abundance and species richness of fungi included the volume of substrate (dead wood) and remaining nest debris (fruits, insects, and old feathers of imprisoned female). Further study on nature of sap and chemical compounds produced by Balakata is needed in order to explain the lack of large size cavity in Balakata, despite being a softwood tree. Nest cavities of hornbills were predominantly found in two tree genera/species, Yang sian (Dipterocarpus gracilis) and Wa (Cleistocalyx nervosum). By contrast, Sali nok (Balakata baccata), although it is large in size and common in the study area, no nest cavity was found. In this study, the abundance of cavities in these three tree genera was determined. The numbers of trees with at least one cavity were the lowest for Balakata (4%), 15.5% for Dipterocarpus, and 13.7% for Cleistocalyx. The trends were also similar for the abundance of cavities. The abundance of cavities in these tree genera was somewhat related to susceptibility of the tree to wood decay fungi. The susceptibility (or resistance) and host specifi city may be related to wood structure and/or chemical substance the tree produced, which may inhibit (or enhance) growth rate of fungi and in turn affect decay process.
This paper was presented at the 5th International Hornbill Conference jointly organised by the National Parks Board (Singapore) and the Hornbill Research Foundation (Thailand), in Singapore on 22nd–25th March 2009.
KEY WORDS. – Wood decay fungi, hornbill nest cavity, Dipterocarpus gracilis, Clesitocalyx nervosum, Balakata baccata, Khao Yai National Park.
THE RAFFLES BULLETIN OF ZOOLOGY 2011 Supplement No. 24: 95–113Date of Publication: 30 Mar.2011© National University of Singapore
INTRODUCTION
Wood decay fungi are important to ecological systems as they are responsible for recycling of plant materials and
are important components of global carbon cycling (Odor et al., 2006). Their ability to degrade wood components is crucial to wood decomposition process. Three groups of wood decay fungi are recognized: white rot, brown rot and
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Supa-Amornkul et al.: Wood decay in hornbill nests
soft rot fungi based on the components of wood that they can degrade (Käärik, 1974). Different groups have different abilities in degrading different substances. For instance, the white rot Basidiomycetes and xylariceous Ascomycetes are the principal organisms responsible for wood decay in hardwood of tropical forests. In contrast, brown rot fungi are important in coniferous forest (Hammel, 1997). Wood decay fungi utilize a variety of starting substrates, including living trees with heart and butt rot, snags or fallen logs (Lonsdale et al., 2008). Wood decay fungi thus play an important role in creating ecological niches (Lonsdale et al., 2008), including cavities in trees, and at the same time degrading dead wood of forest trees in a forest ecosystem.
How do wood decay fungi get involved in biology of hornbills, particularly in breeding biology? Hornbills are very large birds of the family Bucerotidae that inhabit tropical forest and savanna of Asia and Africa (Kemp, 1995) and are secondary-cavity nesters. They are unable to excavate their own nest cavity, and therefore strictly rely on a suitable existing cavity, which is recognized as an important breeding limiting factor (Poonswad, 1995). The role of wood decay fungi as dead wood decomposers in the forest ecosystem indirectly benefi ts hornbills by creating and/or enlarging a cavity, which may later serve as a nest chamber.
The availability of cavities is very important to a wide variety of animals ranging from insects, reptiles, birds to mammals, who utilize them as nesting chambers or shelters (Poonswad, 1993). In a tropical forest, a cavity in a tree can be created by a number of ways, directly or indirectly. A cavity can be actively excavated by animals, particularly birds such as woodpeckers (Family Picidae) (Hopper & Lennartz, 1991), with an assumption that eventually the cavity becomes infected by wood decay fungi and gets enlarged. The cavity can also be indirectly created in trees with physical damage caused by natural phenomena, frequently by wind. The wind breaks off branches and causes wounds on the tree trunk (Poonswad, 1995), which subsequently is subjected to infection by one or more wood-degrading microorganisms, including wood decay fungi. In a tropical forest, such as moist evergreen forest, the study of wood decay fungi is very limited (Lodge, 1997). There is no documentation on species richness inside cavities of tropical forest trees, and whether the species richness has correlation with the existence and the size of the cavity. Known information on wood decay fungi that infect tropical trees of family Dipterocarpaceae and cause heart and butt rot are fungi of genera Ganoderma and Cryptoderma (Chalermponse, 1987); and presumably a cavity is formed. Trees in family Dipterocarpaceae i.e., Dipterocarpus, Hopea, Shorea, Neobalanocarpus and Syzygium of Myrtaceae are known to be predominant trees, which bear nest cavities for hornbills in Thailand, (Chuailua et al., 1998, Poonswad et al., 2005). Wood of various species of Syzygium, on the other hand, demonstrated resistance to white and brown rot fungi tested for decay resistance in Fiji (Osboren & Lynette, 1967). Wood decay fungi do not involve only in creating cavities but also degrading cavities. This obviously has a negative effect on the hornbill. The continuation of decay process inevitably causes the cavity fl oor to sink deeply,
thus making the cavity unsuitable as a nest for hornbills. Such cause is recognized as the main problem found in the nest trees of Dipterocarpus and Syzygium genera (Chuailua et al., 1998). The loss of suitability of a nest cavity directly affects the reproduction of hornbills and hornbill population as a whole.
In this paper, the fi rst study in a moist evergreen forest, we investigated abundance and diversity of wood decay fungi both inside and outside cavities of hornbill nest trees. We also extended our study to investigate the wood decay fungi on non-nest trees in this forest type.
MATERIALS AND METHODS
Study area. – The study was carried out in a moist evergreen forest, the habitat of hornbills, at Khao Yai National Park situated in the central-north region of Thailand (14° 15' to 14° 35'N and 101° 5' to 101° 52'E) (Fig. 1). In the park, there are four hornbill species living in sympatry, viz. Great Hornbill (Buceros bicornis), Wreathed Hornbill (Rhyticeros undulatus), White-throated Brown Hornbill (Ptilolaemus austeni) and Oriental Pied Hornbill (Anthracoceros albirostris) (Poonswad et al., 2005). Within the study area, dominant and common large trees (diameter at breast height or dbh ≥ 40 cm) are Dipterocarpus gracilis (referred to as D. costatus in Liewviriyakit, 1989), Sloanea sigun, Castanopsis accuminatissima, Cliestocalyx nervosum (referred to as Eugenia sp. in Liewviriyakit, 1989), Choerospondias axillaris, and Balakata baccata (referred to as Sapium baccatum in Poonswad, 1993).
Collection of wood samples. – Wood samples were collected from cavities that were used by hornbills but abandoned during the study. These cavities situated in trees known as predominant nest tree species i.e., Dipterocarpus gracilis (Dipterocarpaceae) (referred to as D. costatus in Liewviriyakit, 1989) and Cleistocalyx nervosum (Myrtaceae) (referred to as Eugenia cumini in Liewviriyakit, 1989 and Eugenia sp. in Poonswad, 1995, and Syzygium sp. in Chuailua et al., 1998, Poonswad, 1995). Twenty hornbill nest cavities, ten in D. gracilis (Dipterocarpus hereafter, otherwise stated) and ten in C. nervosum (Cleistocalyx hereafter, otherwise stated), that were accessible were selected from abandoned nests with unknown cause and regardless of previous hornbill species. The mean height above ground of these cavities was 25.1±6.0 m in Dipterocarpus and 15.9±3.1 m in Cleistocalyx. To access these hornbill nest cavities, rope climbing was used. For control, wood samples were collected from six Balakata baccata trees (Euphorbiaceae) (Balakata hereafter, and referred to as Sapium baccatum in Poonswad, 1993), a non-hornbill nest tree species (Poonswad, 1993) with dbh ≥ 40 cm (the smallest size of tree which bears hornbill’s nest, Poonswad, 1995), a common large tree species (Gardner & Sidisunthorn, 2000) at about 60 cm above ground, and an existing scar or wound on the tree trunk. Locations of studied trees were marked with GPS (Garmin, eTrex) and are shown in Fig. 1. Wood samples from all trees were collected in dry season (between December 2005 and March 2006).
97
THE RAFFLES BULLETIN OF ZOOLOGY 2011
Fig. 1. Location of Khao Yai National Park and locations of sampled trees.
In wet season, we were unable to collect samples during consecutive months due to diffi culties in accessing the cavities of Dipterocarpus. Only wood samples from Cleistocalyx were collected (between June and July 2005). Wood samples from Dipterocarpus and Balakata were then collected between August and October, 2006. Additionally, wood samples from six dead Diptercarpus and six Cleistocalyx trees were collected in dry season (March 2006) for the observation of true wood rot fungi.
Wood samples were collected at various positions of the cavity using a chisel. Inside the nest cavity, samples were collected from left and right sidewalls and the wall opposite the cavity opening or nest entrance. Outside samples were collected at the backside opposite the cavity opening. From Balakata, samples were taken from a wound or a scar found on the trunk.
Abundance of cavities. – Abundance of tree cavities with dbh ≥ 40 cm from wild populations was checked. We sampled predominant nest-tree species from 103 Dipterocarpus trees, 102 Cleistocalyx trees, and 101 non-nest Balakata trees along Thanarat Road inside the park between Km 31-34 posts. The number of cavities found was recorded regardless of the cavity size or position of the cavity on the tree. Measurement of individual tree size (in dbh) was not done.
Fungal isolation. – Lignin cellulose medium (LCM) was modifi ed from minimal medium (Paterson & Bridge, 1994) by adding lignin cellulose as a carbon source instead of sucrose. LCM was modifi ed to facilitate the growth of fungi which can degrade wood components. The LCM agar was used to select wood decay fungi from wood samples. Half potato dextrose agar (1/2 PDA) was used to purify the fungal isolates. For identifi cation of the fungi, malt extract agar (MEA), potato dextrose agar (PDA) (Merck), sabouraud 4% dextrose agar (Merck) (SDA) and sporulated medium agar (SA) (Nugent et al., 2006) were used to determine macroscopic morphology of the fungi. When molecular identifi cation was necessary, potato dextrose broth (PDB) was used to prepare fungal mycelium.
Fungi identifi cation. – Fungal isolates were classifi ed to genus and species when possible. For sporulating fungi, we identifi ed morphological characteristics through observations, both macroscopically and microscopically. For uncertain and non-sporulating fungi, molecular technique was used. Briefl y, Whatman FTA card was used for extraction of fungal DNA of non-sporulating fungi. ITS1-5.8S-ITS2 regions of ribosomal DNA (rDNA) used for fungal identifi cation were amplifi ed by PCR using the forward primer ITS1 and the reverse primer ITS4 as described in White et al., (1990). Amplifi cation reaction was performed in a total volume of 50 µl. Reaction mixture contained 0.5 µM of each primer, 50 µM of individual dNTP, 3 mM of MgCl2, 10X buffer, 1 U Dynazyme EXT polymerase (Finnzyme) and a processed 2-mm FTA dish carrying the fungal DNA. Amplifi cation process consisted of (i) pre-denaturation step at 95°C for 3 min, (ii) 30 consecutive cycles at 95°C for 50 sec (denaturation), 55°C for 40 sec (annealing) and 72°C for 40 sec (extension), and (iii) a fi nal extension at 72°C for 10 min. PCR products were ligated into pGEM-T easy vectors for preparation of recombinant plasmids and transformed into E. coli DH5α. Isolated plasmid from each clone was checked for insertion by restriction enzyme digestion. Extracted plasmids were sequenced in an automate sequencer (ABI PRISM TM model 3730XL, Perkin Elmer). The fungi were identifi ed by comparing the ITS1-5.8S-ITS2 sequences with those of the reference strain fungi in the GenBank.
Data analyses. – To compare the abundance of cavities found in Dipterocarpus, Cleistocalyx and Balakata trees, Chi square-test was used. The fungal species richness isolated from each studied tree species was compared by rarefraction method. To measure diversity of isolated fungi, the Simpson’s reciprocal and Shannon-Wiener indices were used. To test the correlation between the numbers of isolates and species, Spearman Rank Correlation was used. To determine similarity of isolated fungi in various host trees, Chao-Sorensen Est-Abundance Base was applied (Chao et al., 2005). Species richness and diversity indices were calculated by BioEdit version 7.0. All statistic tests were calculated by SPSS version 13.00 program.
RESULTS
Abundance of cavities in studied trees. – The numbers of cavities found in wild tree population were relatively low, only 34 (11.1%) out of 306 trees (Table 1). There was no difference in the numbers of cavities recorded from Dipterocarpus and from Cleistocalyx trees, (χ2=0.668, df=1, P=0.414) (Table 1). Balakata, as non-nest trees, obviously had a low number of cavities. Therefore, Balakata had signifi cantly less cavities than those of the former two species (χ2=9.78, df=1, P=0.02 and χ2=6.093, df =1, P=0.014, respectively). The number of cavities per tree was highest in Cleistocalyx (1.8 cavities /tree) (Table 1). It was also noticed that cavities found in Balakata were shallow and small.
Fungal abundance and seasonality. – A total of 1,199 fungal isolates were obtained from studied trees and two additional
98
Supa-Amornkul et al.: Wood decay in hornbill nests
Table 1. Number of cavity trees and average number of cavities observed in sampled trees from wild populations of Dipterocarpus, Cleistocalyx, Balakata at Khao Yai National Park.
Tree species N No. cavity tree (%) Total cavity Ave. number of cavities per tree
Diptercarpus 103 16 (15.5) 17 1.1
Cleistocalyx 102 14 (13.7) 25 1.8
Balakata 101 4 (4.0) 4 1
Total 306 34 (11.1) 46
dead Dipterocarpus and Cleistocalyx (Table 2). Of the total, the number of isolates obtained from Dipterocarpus and Cleistocalyx in both wet and dry seasons were similarly high, 565 isolates (47.1%) and 513 (42.8%), respectively (Table 2). However, the highest number of isolates (429 isolates) was from the cavities of Dipterocarpus in wet season. To compare the total number of isolates from these nest trees and that from Balakata, we also included the isolates from outside the cavity. In wet season, the number of isolates was apparently higher than that in dry season for all studied trees (Table 2, Fig. 2a, and Appendices 1a–b). Distinct increase in the number of isolates in wet season indicated that season has high infl uence on the abundance of fungi, especially on Dipterocarpus and Cleistocalyx (Appendices 1a–b).
The majority of isolates, 1,182 (98.6%), sporulated in cultures, and 90.9% (1,074 isolates) were from Dipterocarpus and Cleistocalyx. The rest (17 isolates, 1.4%) were non-sporulating fungi and were mainly from Balakata in wet season (10 isolates, 58.8 %) (Table 2).
Fig. 2. a) Total number of fungal isolates from 10 of studied trees in different seasons and b) Total number of fungal species isolated from studied trees in different seasons.
To compare the average number of isolates from inside and outside the cavity, we consistently calculated the number of isolates from samples collected from one location, the right wall of the cavity, since the average numbers of isolates obtained from various locations inside the cavity showed no signifi cant difference. Therefore, the data shown in Table 3 and Fig. 2 were from the right wall inside the cavity. For the rest of the analyses, we used entire data from all samples collected inside and outside (Appendices 1a–b), otherwise stated. Fig. 2a compares total number of fungal isolates obtained from inside and outside the cavities of Dipterocarpus, Cleistocalyx and Balakata in dry and wet seasons. The average number of fungal isolates collected from inside and outside cavities among these studied trees in both seasons were signifi cantly different (Kruskal-Wallis test, χ2=54.756, df=3, P=0.000) (Table 3). The average number of isolates was the highest, both from inside and outside cavity of Dipterocarpus, in wet season and signifi cantly differed from those of Cleistocalyx. Overall, pairwise test shows signifi cant difference between the average numbers of isolates from inside and outside in both seasons, except for a few pairs (Table 3). It is apparent that wet season and location (i.e., inside the cavity) had infl uence on the abundance of fungi (Table 3 and Fig. 2a). The isolate abundance was found to be very highly correlated with the number of species (Spearman Rank Correlation: R2 0.900, P=0.000, N=52) (Fig. 2). Therefore, both terms, isolates and species, were used in the following analyses. Species richness had the same trend as the abundance of isolates i.e., high in wet season and from inside the cavities (Table 2, Fig. 2b, and Appendices 1a–b).
Species richness, diversity and composition. – The species accumulation curves for species richness of fungi isolated from different studied tree species shows that species added per tree appeared to reach or nearly reach stationary state for all host tree species (Fig. 3a). Similar trend, species accumulation curves obtained from outside the cavity or on the trunk of each studied trees nearly reached stationary state except for those of Balakata (Fig. 3b). The highest number of species was recorded from Cleistocalyx trees (Table 2, Fig. 3, and Appendix 1a). However, additional number of trees to each host tree/wood may yield a slightly more genera/species. Hence, number of sample size used in this study was considerably suffi cient.
List of fungal isolates and species recorded from inside and outside of all studied trees and wood in dry and wet seasons is given in Appendix 1. Of the 1,199 isolates, there were 68 species (43 unidentifi ed) of 52 genera from 30 families in 4 phyla identifi ed (Table 2 and Appendix 1a). Among the
99
THE RAFFLES BULLETIN OF ZOOLOGY 2011
Tab
le 2
. Sum
mar
y of
fun
gal
isol
ates
ide
ntifi
ed i
n th
is s
tudy
. Sho
wn
here
are
the
num
bers
of
isol
ates
, tot
al g
ener
a/sp
ecie
s, s
poru
latin
g an
d no
n-sp
orul
atin
g fu
ngi,
the
num
ber
of c
lass
ifi ed
fun
gi, a
nd
dive
rsity
ind
ices
and
eve
nnes
s by
sea
son
for
each
stu
dies
tre
e.
D
ry
Wet
B
oth
seas
ons
D
ip
Cle
is
BB
D
ead
Dip
D
ead
Cle
is
Dip
C
leis
B
B
Tota
l D
ip
Cle
is
BB
(n
=10)
(n
=10)
(n
=6)
(n=6
) (n
=6)
(n=1
0)
(n=1
0)
(n=6
)
(n=2
0)
(n=2
0)
(n=1
2)To
tal
(Iso
late
s)
136
195
21
22
37
429
318
41
1199
56
5 51
3 62
Tota
l (G
ener
a/Sp
ecie
s)
23
27
9 11
10
33
40
12
68
40
51
16
Sp
orul
atin
g
Sp
ecie
s 23
27
9
10
10
32
37
10
62
Gen
era
16
20
8 7
4 22
26
7
45
Fam
ily
9 11
4
4 4
14
19
8 28
Phyl
um
3 3
2 2
1 4
4 1
4
unce
rtai
n 0
1 0
0 0
0 1
0 2
Tot
al (
isol
ates
) 13
6 19
5 19
21
37
42
8 31
5 31
11
82
N
on-s
poru
latin
g
Spec
ies
0 0
1 1
0 1
3 2
6
Gen
era
0 0
1 1
0 1
3 2
6
Fam
ily
0 0
1 1
0 1
3 2
5
Phyl
um
0 0
1 1
0 1
1 1
2
Unc
erta
in
0 0
0 0
0 0
0 0
0
Tot
al (
isol
ates
) 0
0 2
1 0
1 3
10
17
In
side
and
out
side
cav
ity
Si
mps
on’s
ind
ex
10.3
0 6.
35
7.
52
9.02
Sh
anno
n-W
eine
r in
dex
1.14
1.
02
1.
06
1.21
O
utsi
de c
avity
Si
mps
on’s
ind
ex
11.3
4 3.
33
10.5
0 8.
56
4.47
5.
94
6.30
9.
21
Sh
anno
n-W
eine
r in
dex
0.83
0.
41
0.90
5 0.
93
0.77
0.
91
0.91
0.
97
Dip
= D
ipte
roca
rpus
, Cle
is =
Cle
isto
caly
x, B
B=
Bal
akat
a, D
ead
Dip
=sa
mpl
ed f
rom
dea
d D
ipte
roca
rus
woo
d, D
ead
Cle
is=
sam
pled
fro
m d
ead
Cle
isto
caly
x w
ood.
100
Supa-Amornkul et al.: Wood decay in hornbill nests
Fig. 3. a) Species accumulation curves obtained from each type of studied tree species/wood and b) species accumulation curves obtained from outside-cavity or tree- trunk isolates for each type of studied tree species/wood.
68 species, 40 species (58.8% of total) were identifi ed from Dipterocarpus, 51 (73.5%) from Cleistocalyx, 16 (23.5%) from Balakata, 11 (16.2%) from dead Dipterocarpus and 10 (14.7%) from dead Cleistocalyx. There were 10 exclusive species (14.7%) found in Dipterocarpus, 20 (29.4%) in Cleistocalyx, four species (5.9%) in Balakata, and only one species (1.5%) i.e., Trichoderma spirale in dead Dipterocarpus. There were eight species (11.8%) found in common among these three studied species (Table 2 and Appendix 1a). Among 30 exclusive species found in both species of nest trees, there were 23 species (76.7%) found only inside the cavity and four species (13.3%) found outside the cavity regardless of host tree species (Appendix 1b).
There were three unidentified species of Fusarium, Gliocladium and Trichoderma genera found in most abundance in both seasons (Appendix 1a). Of 68 species obtained, 14 (20.6%) were isolated only once. Five isolates could not be identifi ed to species level (Appendix 1a).
Considering diversity indices given in Table 2, we compared between Dipterocarpus and Cleistocalyx based on the same data collection from both inside and outside the cavities. The highest diversity was from Dipterocarpus in dry season determined by both Simpson’s and Shannon-Weiner indices (10.30 and 1.14, respectively). In contrast, fungal diversity in Cleistocalyx was markedly high in wet season, (9.02 and 1.21, respectively) (Table 2). To compare species diversity index among 3 studied tree species, we used data from outside the cavity. Dipterocarpus hosted highest species diversity of
wood decay fungi in dry season (Simpson’s index: 11.34), but the diversity markedly decreased in wet season based on Simpson’s index. In contrast, species diversity in Cleistocalyx was the lowest in dry season, indicated by both Simpson’s and Shannon-Weiner indices (3.33 and 0.44, respectively) and increased drastically (6.30 and 0.91, respectively) in wet season. On the other hand, species diversity in Balakata was similar in both seasons. It should also be noted that the dead Cleistocalyx hosted low fungal diversity as confi rmed by both values of Simpson’s and Shannon-Weiner indices (4.47 and 0.77, respectively).
The ten most common fungal species ranked by the number of isolates from each studied tree genus and dead wood are shown in Table 4 and accounted for a total of 25 species from fi ve different sample types (trees and wood). Scoring was obtained from ranking of fungal species by host trees. The rank of each fungal species from each tree/wood was scored ranging from 10 to 1 for corresponding rank 1 to 10, then combined to get fi nal rank for each fungal species. Trichoderma sp. 1 was the most frequently isolated in this study, followed by Gliocladium sp. 1 and Fusarium sp. 1 (Table 4).
Wood decay fungi found in this study were dominated by soft rot fungi (62 species, 91.2% of the total 68) (Table 5). Among these soft rot fungi, 58 of 62 species (93.5%) were in Ascomycota (Appendix 1a). There were only two species of white rot fungi i.e., Coprinus sp. isolated only from outside of Dipterocarpus, and Sporotrichum sp. isolated from both inside and outside cavities of both Dipterocarpus and Cleistocalyx (Table 5 and Appendix 1a). Soft rot fungi were isolated in all studied trees with similar percentages (Table 5). While white rot fungi were isolated from cavities of Dipterocarpus and Cleistocalyx, but not from Balakata. Candelariella sp., Candida sp., Carpoligana sp., and Phaetrichospaeria sp. were not wood decay fungi (Table 5 and Appendix 1).
DISCUSSION
Fungal abundance and species richness. – Among limited studies on wood decay fungi in tropical forest, most of wood documented decomposition by wood decay fungi (Lonsdale et al., 2008; Osboren & Lynette, 1967; Setala & MacLean, 2004) and host specifi city (Gilbert & Sousa, 2002, May, 1991), but not the species richness of wood decay fungi from tree cavities. More numbers of fungal isolates and species richness in wet season than in dry season for all sample trees in this study (Tables 2–3; Fig. 2a–b; Appendix 1) indicate the infl uence of physical environment factors on the growth of fungi, which appears to be in agreement with Käärik (1974) who suggested that the most important factors in spreading and survivals of microorganisms in wood are moisture content of the wood, aeration, temperature and interaction between microorganisms. Being a suitable host for any microorganisms, there is one important process i.e., establishment. The establishment of wood decay fungi is known to dependent on combined factors, including infection source (e.g., arrival of spores), optimal physical
101
THE RAFFLES BULLETIN OF ZOOLOGY 2011
Tab
le 3
. Mea
n is
olat
es o
f fu
ngi
colle
cted
fro
m i
nsid
e an
d ou
tsid
e ca
vitie
s of
Dip
tero
carp
us a
nd C
leis
toca
lyx
in b
oth
seas
ons
with
χ2
and
z –
valu
es.
Tre
e
Insi
de c
avit
y O
utsi
de c
avit
y K
rusk
al-W
allis
tes
t W
ilcox
on
Sign
ed R
ank
test
M
ann
– W
hitn
ey U
- te
st
Dry
W
et
Dry
W
et
χ2 (d
f=3)
P
Z
pa
ir
Z
pair
Dip
-2.7
10
DD
I&D
DO
* -1
.338
D
DI&
DC
I
M
ean
4.8
13.6
1.
4 9.
1
-2
.652
D
CI&
DC
O*
-0.4
72
DD
O&
DC
O
S.
D.
1.5
2.8
2.1
2.8
-2.8
14
WD
I&W
DO
* -2
.576
D
DO
&D
BO
*
Ran
ge
3 -
7 9
- 19
0
- 5
5 –
14
-2.6
68
WC
I&W
CO
* -3
.038
D
CO
&D
BO
*
N
10
10
10
10
Cle
is
-2
.812
D
DI&
WD
I*
-2.8
98
WD
I&W
CI*
Mea
n 6.
4 8.
3 0.
5
6.3
-2.8
12
DD
O&
WD
O*
-2.5
52
WD
O&
WC
O*
S.D
. 3.
6 4.
0 0.
7 3.
9 54
.756
0.
000
-1.1
27
DC
I&W
CI
-1.9
88
WD
O&
WB
O*
Ran
ge
0 -
11
2 -
16
0 -
2 1
– 14
-2
.677
D
CO
&W
CO
* -2
.137
W
CO
&W
BO
*
N
10
10
10
10
BB
-1.6
82
DB
O&
WB
O
Mea
n
3.
5 6.
8
S.D
.
1.
6 3.
6
Ran
ge
1 –
5 0
– 10
N
6 6
Dip
=D
ipte
roca
rpus
, Cle
is=
Cle
isto
caly
x, B
B=
Bal
akat
a, D
DI=
isol
ates
fro
m D
ipte
roca
rpus
ins
ide
cavi
ty i
n dr
y se
ason
, DD
O=
isol
ates
fro
m D
ipte
roca
rpus
out
side
cav
ity i
n dr
y se
ason
, D
CI=
isol
ates
fro
m C
lesi
toca
lyx
insi
de c
avity
in
dry
seas
on, D
CO
=is
olat
es f
rom
Cle
isto
caly
x ou
tsid
e ca
vity
in
dry
seas
on, D
BO
=is
olat
es f
rom
Bal
akat
a in
dry
sea
son,
WD
I=is
olat
es f
rom
Dip
tero
carp
us i
nsid
e ca
vity
in
wet
sea
son,
WD
O=
isol
ates
fro
m D
ipte
roca
rpus
out
side
cav
ity i
n w
et s
easo
n, W
CI=
isol
ates
fro
m C
lesi
toca
lyx
insi
de c
avity
in
wet
sea
son,
W
CO
=is
olat
es f
rom
Cle
isto
caly
x ou
tsid
e ca
vity
in
wet
sea
son,
WB
O =
isol
ates
fro
m B
alak
ata
in w
et s
easo
n, *
= s
igni
fi can
tly d
iffe
rent
(P
< 0
.05)
.
102
Supa-Amornkul et al.: Wood decay in hornbill nests
Table 4. The ten most prevalent genera/species recorded from each studied tree and dead wood with sum scores and fi nal ranks.
Species
Rank Sum Score Final Rank
Dip Cleis BB DD DC
Trichoderma sp1. 2 1 1 1 1 49 1
Gliocladium sp1. 1 4 5 6 4 35 2
Fusarium sp1. 5 2 6 6 2 34 3
Gliocladium virens 3 3 6 21 4
Fusarium solani 8 8 3 6 19 5
Fusarium ventricosum 6 5 5 17 6
Trichoderma harzianum 2 3 17 6
Sporotrichum sp. 3 6 13 8
Paecilomyces victoriae 3 6 13 8
Aspergillus sp. 9 4 9 10
Bipolaris oryzae 2 9 10
Cylindrocarpon sp. 7 6 9 10
Mucor sp. 3 8 13
Penicillium sp. 3 8 13
Acremonium sp. 8 6 8 13
Phialophora richardsiae 6 5 16
Trichoderma spirale 6 5 16
Paecilomyces sp. 6 5 16
Pythium sp. 7 4 19
Mortierella sp. 7 4 19
Arthrographis cuboidea 8 3 21
Codinaea sp. 8 3 21
Carpoligna sp. 8 3 21
Verticillium sp. 10 1 24
Cylindrocladium sp. 10 1 24
The lowest value of the rank is genus/species which has the highest number of fungal isolates. Dead=dead Dipterocarpus and Cleistocalyx wood sample.
Table 5. Numbers of genera/species and percentages of each wood decay fungal group found in studied trees and dead wood.
Fungal group Dipterocarpus Cleistocalyx Balakata Dead Dip Dead Cleis Total No. % No. % No. % No. % No. %
Soft rot 36 90 48 94.1 15 93.8 11 100 10 100 62
White rot 2 5 1 2 0 0 0 0 0 0 4
Non rot 2 5 2 3.9 1 6.2 0 0 0 0 2
Total genera/species 40 51 16 11 10 68
Dead Dip=dead Dipterocarpus wood, Dead Cleis=dead CLeistocalyx wood.
environment conditions (e.g., temperature and moisture), suitable substrate, and absence of poisonous or inhibiting substances (Käärik, 1974). Not only external factors or physical factors are important, the establishment is certainly infl uenced by biological factors, for instance, plant cell components, which form wood structure and properties. Cell walls of these have different structures which resist to different fungal enzymes (Akin et al., 1995; Gilbert & Sousa, 2002) at different levels.
This study strongly suggests that an important external factor for growth of fungi is moisture. Fungal species richness in
the studied trees during wet season and inside the cavity (Tables 2–3; Fig. 2; Appendix 1) clearly favors moist condition. Inside the cavity, moisture may not differ much in both dry and wet seasons. Thus, species richness in both Dipterocarpus and Cleistocalyx was relatively similar, except for inside Cleistocalyx in wet season which accommodated the highest species richness (Fig. 2b; Appendix 1b). Relative humidity inside a hornbill nest cavity measured 24 hours varied between 70% and 100% and daily mean temperature varied between 22°C and 27°C in dry season and in the same area as the present study (Poonswad, 1993). These ranges of environmental factors are perhaps suitable for the
103
THE RAFFLES BULLETIN OF ZOOLOGY 2011
establishment and growth of the fungi. On the other hand, daily relative humidity on the ground varied greatly between 40% and 100% and mean temperature varied between 19°C and 23.3°C in dry season (Poonswad, 1993). This may not favor the growth of fungi outside the cavity as shown by pairwise test (Table 3). The number of fungal isolates from Balakata (only outside) did not differ in both seasons but was signifi cantly less than those of the other two species in both seasons. This moisture content does not correspond to the case of Balakata. If the decay rate is related to the ability of fungi to establish, which may further be implied to species richness, then the effect of wood moisture content on decay rate documented by Käärik (1974) would be sensible. As wood of Balakata contains very high moisture content (187%, Appendix 2); therefore, it may inhibit the establishment of the fungi. Besides high moisture content, this case suggests that there might be other factors which reduce the susceptibility or establishment. For instance, sap and chemical compounds produced by this tree may have defensive properties or activities which prevent further infection after an injury occurs (e.g., after sample collection in the fi rst season). Therefore, it is interesting to study fungi inside those small and shallow cavities of Balakata and nature of its sap, particularly chemical compounds produced and their activities.
Other than moisture and temperature, factors infl uencing species richness inside the cavity include physical environments and nest debris (e.g. fruits and insect remains). It is known that imprisoned female and chicks are fed with a great variety of fruits and insects by the male (Poonswad et al., 1998). These debris and remains provide optimal condition and additional substrates for fruit rot fungi. High species richness inside the cavities of Dipterocarpus and Cleistocalyx may be infl uenced by these fungi living on such debris inside the cavity. High number of isolates in Dipterocarpus was greatly contributed by the isolates of Gliocladium sp., which is one of the documented fruit rot fungi (Appendix 1a).
Wood decay fungi and cavities. – In this study, the initiation of a cavity in these studied trees is not our prime objective. For hornbills, as secondary cavity nesters, are unable to excavate their own nests (Poonswad et al., 1987). Cavities in trees speculated to be the results of interactions between wood of host tree (substrate) and decomposers, including wood decay fungi, after the trees have been injured by any causes. There are a number of studies suggesting that the rate of wood decomposition by the complex of wood-colonizing microorganisms, including wood decay fungi, tends to be affected by seasonal variations of temperature and moisture content in wood (Käärik, 1974; Lonsdale et al., 2008; Poonswad, 1995). Wood decay fungi play important roles in hornbill’s life through decomposition process: positive effect (e.g., creation of a cavity) and negative effect (e.g., degrading a nest chamber). Being predominant nest tree species, the Dipterocarpus and Cleistocalyx and the non-nest tree, the Balakata, were confi rmed by the corresponding number of cavities recorded in wild population and the abundance of wood decay fungi isolated (Tables 1, 2, 5, Fig. 2b and Appendix 1).
Study on the relationship between species richness and decomposition rate is inconclusive. However, there are studies on species richness of soil fungi that had positive relationship with litter decomposition rate (Setala & MacLean, 2004; Tiunov & Scheu, 2005). Käärik (1974) documented that wood with moisture content between 60 and 100 % would be rapidly decomposed, and those contains moisture lower than 30% or higher than 120% would not be putrefi ed. If consider only wood moisture content, only a few and small cavities would have been expected from Cleistocalyx and Dipterocarpus. While Cleistocalyx had highest number of cavities and highest species richness of wood decay fungi (Tables 1–2), wood of this species contains 12 % of moisture content, which is the same as Dipterocarpus (Appendix 2). We hypothesize that toughness and strength of wood affect fungi susceptibility and decay rate, as observed in the tree with tougher wood i.e., Dipterocarpus, which has reduced fungi susceptibility and decreased decay rate, when compared to Cleistocalyx (Appendix 2). On the contrary, Balakata wood properties (including toughness, strength and hardness) are far less than those of the former two species, except for the very high moisture content (187%). However, Balakata wood had the least number of cavities and the lowest species richness. Other evidence, which may better explain the difference in fungal species richness, by Lonsdale et al. (2008) stated that species richness of wood decay fungi positively related with the amount of substrate. Therefore, the substantial differences in fungal species richness between those of Cleistocalyx or Dipterocarpus and Balakata can be explained by the fact that the former two species had greater volume of substrates (dead wood) inside the cavity but lack in the latter species.
However, studies on wood decay fungi and their host trees suggest that structure of plant cells and antifungal components in each plant species infl uence decay process by wood decay fungi (Akin et al., 1995; Alfredsen et al., 2008; Gilbert & Sousa, 2002). Major components of wood cell wall are cellulose, hemicelluloses, and lignin. Wood decay fungi of different groups have different ability in breaking down these substrates (Käärik, 1974). Lacking information on wood cell wall components of all trees in this study, it is not possible to make a conclusion that wood components are involved as factors in wood degradation by wood decay fungi. The highest species richness of wood decay fungi isolated from inside cavities of Cleistocalyx trees in this study (Tables 2, 5, Fig. 2b and Appendix 1b) and higher percentage of nest cavities with sunken fl oor in Cleistocalyx than those in Dipterocarpus (Chuailua et al., 1998) may imply that the rate of wood decomposition inside the cavity of Cleistocalyx is higher than that of the Dipterocarpus trees, which hosted less species richness (Tables 2 and 5, Fig. 2b). As availability of suitable nests is important for hornbill population, wood decay results in relatively high percentage of cavity loss, which directly affects hornbill breeding. The sunken nest fl oor, as a result of decomposition process, in these two predominant nest trees may be enhanced by relative humidity and temperature inside the cavity (70–100% and 22–27°C, respectively, Poonswad, 1993), although the wood of these two species has low moisture content.
104
Supa-Amornkul et al.: Wood decay in hornbill nests
Wood decay fungi isolated in this study were dominated by soft rot fungi (62 species or 91.2% of total species, Table 5). This composition is similar to the fungi found in woodpecker nest-cavity trees or snags, which are predominated by fi lamentous Deuteromycetes fungi and yeast (Huss et al., 2002). There were only two species of white rot fungi, Coprinus sp. and Sporotrichum spp., and, as expected, none of brown rot fungi. The establishment of soft rot fungi may be infl uenced by the following factors. Firstly, the physical conditions inside the cavity may favor soft rot fungi. For instance, relative humidity inside the cavity tends to be higher than that of the outside (Poonswad, 1993), and the soft rot fungi tend to be found under high moisture conditions (Käärik, 1974). Secondly, after the pioneer species invades a wound of a tree, it normally causes heart and butt rot resulting in cavity formation. Then appropriate conditions in the cavity would facilitate the succession of other fungi. Thirdly, the succession of soft rot fungi appears to overwhelm the other groups of fungi. It could be that the cavities in this study were old (indicated by its large size, which accommodates a female hornbill and one chick or more), and that succession of the fungal community in the cavities has already occurred. Fourthly, either mutual or antagonistic interaction among fungi may affect the growth of one another on the host. Many soft rot fungi (e.g., Trichoderma spp., Penicillium spp., Gliocladium spp., Aspergilus spp.) established in this study were known to be antagonistic to the growth of Basidiomycetes (Ejechi, 1997, Huss et al., 2002). Therefore, the appearance of certain species of wood decay fungi is directly related to the time length and the decay rate.
Succession of fungi can take over the pioneer species through a series of organisms, which are capable of utilizing various components of wood as substrates over the course of time (Huss et al., 2002). From this information, it is clear that along the steps of wood degradation, different types of microorganisms are involved. Hence, rough dating of a cavity existence may be possible. Most of the fungi in this study which are known to have antagonistic activity to other fungi were predominantly found inside the cavities of Dipterocarpus and Cleistocalyx. This may be another reason the only one species of white rot fungi, Sporotrichum sp., was found in wood samples collected from inside nest cavities, whereas Coprinus sp. was only isolated from outside the cavity of Dipterocarpus in wet season. The establishment of Coprinus sp. in wet season can be interpreted as either this species is specifi c to Dipterocarpus tree or it is a seasonal occurrence. The positions where wood samples were collected from outside of the cavities of Dipterocarpus, Cleistocalyx, and Balakata in dry and wet seasons were relatively in the same region. This implies that a wound was fi rst created in dry season and then wood sample collections were repeated in wet season. Then, Coprinus, which was one of the pioneer species that created a cavity, may establish on Dipterocarpus tree during wet season.
Species diversity and host specifi city. – Two diversity indices adopted in this study in order to measure the diversity of fungal community on different host tree species weight on different factors. Simpson’s index is the highest for
fungal diversity of Dipterocarpus tree and second by that of Balakata (Table 2), while Shannon-Weiner index is the highest for fungal diversity of Balakata. Simpson’s index weighs towards equitability and is an intrinsic diversity index, giving the probability of any two individuals belonging to different species. Shannon-Wiener index is used in statistics as a diversity index. It is notoriously sample-size dependent and tends to be weighted slightly towards species richness. The result of this study corresponds to principle concept of these two indices. Balakata had the second highest diversity of fungi and its isolate number per species was evenly distributed, which was also indicated by the highest evenness value (Table 2). Whereas Cleistocalyx had markedly the lowest species diversity in dry season, and the number of isolates per species did not evenly distribute as it was indicated by the lowest evenness value (Table 2). In order to obtain accurate measurement of diversity, it is necessary to use more than one diversity index.
It is not possible to determine the host specifi city of fungi in this study due to inadequate samples of tree species studied, but we can present the exclusive species and wide host range species found under these limiting conditions. From the total of 68 fungal species found in this study, 35 species (51.5% of total) were exclusively found in all studied tree species (Appendix 1a). Among these fungi found from each studied tree, Cleistocalyx had the highest exclusive species (20 species or 29.4%, Appendix 1) indicating Cleistocalyx as a good host for many wood decay fungi. On the other hand, there were a few fungi (eight species or 11.8 % of total) that had wide host range (Dipterocarpus, Cleistocalyx and Balakata). About one third of the total species shared host trees of Dipterocarpus and Cleistocalyx (Appendix 1a). This may be one of the reasons these two tree species have similar numbers of cavities. Polishook (1996) suggested that much of host preference exhibited by micro-fungal decomposers may relate to physical and chemical characteristic factors rather than host specifi city by the sole taxonomic sense. Wood of some species have anti-fungal substances which resist certain species of fungi (Alfredsen et al., 2008) and this may result in different fungal community establishing in different wood.
On the other hand, May (1991) have reported that the high diversity in tropical forest ecosystems may better support those low host-specifi city fungi than those in low-diversity forests. It is further commented that the low density of individual host species in high-diversity forests limits the host preference or fungal population growth on suitable substrates (May, 1991). The exclusive fungi in Dipterocarpus and Cleistocalyx were found more in wet season. This clearly demonstrates the infl uence of the environmental factors rather than specifi c tree genera. From this study, it was inconclusive whether the exclusive fungi found on Dipterocarpus and Cleistocalyx were genuine host specifi c ones because they were from too small number of host tree species and from too few numbers of isolates (Appendix 1).
Overall, the total of 68 species found in this study tended to yield the maximum number of species richness of wood
105
THE RAFFLES BULLETIN OF ZOOLOGY 2011
decay fungi obtained from adequate number of host trees from each species (Fig. 3). To lengthen the species list, one should include more host tree species. Regardless of evenness, Cleistocalyx had greatest diversity of fungal species, whereas Balakata had the lowest. This substantial difference in establishment of fungi between Cleistocalyx and Balakata (Tables 2 and 3) tends to be affected by a number of combined factors, such as season and condition inside the cavity (e.g., temperature, aeration, humidity and substrate). The latter was not available in Balakata. Besides physical and biological (i.e., wood properties) factors, chemical compounds in wood may limit the growth of certain species. Wood of some species has anti-fungal substance, which resists certain species of fungi (Alfredsen et al., 2008) and results in different fungal community establishing in different wood.
ACKNOWLEDGEMENTS
We would like to express our sincere gratitude and appreciation to Dr. Suthep Wiyakrutta, Dr. Vithaya Meevootisom, for their creative guidance, discussions and constructive criticisms throughout this study. We also wish to sincerely thank Dr. Soraya Chaturongakul for helpful guidance; and Dr. Sumon Yudhasraparasithi for her suggestions and continuous discussion in statistical analysis.
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107
THE RAFFLES BULLETIN OF ZOOLOGY 2011A
ppen
dix
1.a)
Typ
e of
woo
d de
cay
fung
i, ge
nus/
spec
ies
of f
ungi
and
num
bers
of
isol
ates
fro
m D
ipte
roca
rpus
, Cle
isto
caly
x, B
alak
ata,
dea
d D
ipte
roca
rpus
and
dea
d C
leis
toca
lyx
by s
easo
n.
Cla
ssifi
cati
on
D
ry
W
et
To
tal
%P
hylu
m
Typ
e
G
ener
a/Sp
ecie
s D
ip
Cle
is
BB
D
D
DC
D
ip
Cle
is
BB
Is
o Is
o
of r
ot f
ungi
A
scom
ycot
a
B
ione
ctri
acea
e
Soft
rot
Gli
ocla
dium
ros
eum
1
0 0
0 0
0 0
0 1
0.08
Can
dela
riac
eae
N
on t
rot
C
ande
lari
ella
sp.
1
0 0
0 0
1 0
0 2
0.17
Cap
nodi
ales
0 0
So
ft r
ot
F
umag
o sp
. 0
0 0
0 0
0 3
0 3
0.25
Cha
etom
iace
ae
Soft
rot
Ach
aeto
miu
m s
p.
0 0
0 0
0 0
2 0
2 0.
17
Soft
rot
Cha
etom
ium
sp.
0
0 0
0 0
0 1
0 1
0.08
Cha
etos
phae
riac
eae
N
on r
ot
C
arpo
lign
a sp
. 0
0 0
0 0
0 0
2 2
0.17
So
ft r
ot
C
odin
aea
sp.
0 0
0 0
0 0
2 2
4 0.
33
D
ipod
asca
ceae
So
ft r
ot
D
ipod
ascu
s sp
. 0
2 0
0 0
0 0
0 2
0.17
So
ft r
ot
G
alac
tom
yces
geo
tric
hum
0
0 0
0 0
0 1
0 1
0.08
Hyp
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e
Soft
rot
Acr
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ium
sp.
3
8 1
0 1
2 3
0 18
1.
5
Soft
rot
Cyl
indr
ocla
dium
sp.
2
3 0
0 0
4 6
0 15
1.
25
Soft
rot
Fus
ariu
m c
ilia
tum
0
1 0
0 0
0 0
0 1
0.08
So
ft r
ot
sa
rium
sol
ani
5 4
0 2
1 14
7
0 33
2.
75
Soft
rot
Fus
ariu
m r
oseu
m
1 0
0 0
0 0
0 0
1 0.
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rot
Fus
ariu
m s
p1.
11
49
2 1
6 25
31
2
127
10.5
9
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rot
Gli
ocla
dium
vir
ens
2 9
0 1
1 41
43
2
99
8.26
So
ft r
ot
G
lioc
ladi
um v
irid
e 0
0 0
0 0
2 0
0 2
0.17
So
ft r
ot
G
lioc
ladi
um s
p1.
24
25
5 1
3 10
0 22
0
180
15.0
1
Soft
rot
Tric
hode
rma
ham
atum
0
0 0
0 0
2 2
0 4
0.33
So
ft r
ot
Tr
icho
derm
a ha
rzia
num
1
0 0
3 5
2 0
1 12
1
So
ft r
ot
Tr
icho
derm
a ko
ning
i 0
0 0
0 0
1 1
0 2
0.17
So
ft r
ot
Tr
icho
derm
a sp
iral
e 0
0 0
1 0
0 0
0 1
0.08
So
ft r
ot
Tr
icho
derm
a sp
1.
26
53
3 7
16
96
85
8 29
4 24
.52
So
ft r
ot
Ve
rtic
illi
um s
p.
3 4
0 0
0 9
5 0
21
1.75
Mic
roas
cace
ae
Soft
rot
Mic
roas
cus
sp.
0 0
0 0
0 0
3 0
3 0.
25
M
itosp
oric
Asc
omyc
ota
So
ft r
ot
G
liom
asti
x sp
. 0
1 0
0 0
1 0
0 2
0.17
So
ft r
ot
H
umic
ola
sp.
4 1
0 0
0 2
0 0
7 0.
58
Soft
rot
Pap
ulas
pora
sp.
0
0 0
0 0
1 1
0 2
0.17
So
ft r
ot
P
hom
a sp
. 0
0 0
0 0
0 2
0 2
0.17
108
Supa-Amornkul et al.: Wood decay in hornbill nestsA
ppen
dix
1. C
ont’
d
Cla
ssifi
cati
on
D
ry
W
et
To
tal
%P
hylu
m
Typ
e
G
ener
a/Sp
ecie
s D
ip
Cle
is
BB
D
D
DC
D
ip
Cle
is
BB
Is
o Is
o
of r
ot f
ungi
So
ft r
ot
Tr
icho
clad
ium
sp.
3
0 0
0 0
0 0
0 3
0.25
A
scom
ycot
a
M
itosp
oric
Cal
osph
aeri
acea
e
Soft
rot
Phi
alop
hora
ric
hard
siae
0
3 0
0 1
0 1
0 5
0.42
Mito
spor
ic D
erm
atea
ceae
So
ft r
ot
Tr
icho
spor
iell
a sp
. 0
4 1
0 0
0 0
0 5
0.42
Mito
spor
ic E
rem
omyc
etac
eae
So
ft r
ot
A
rthr
ogra
phis
cub
oide
a 0
0 0
0 0
0 0
2 2
0.17
Mito
spor
ic L
epto
shae
riac
eae
0 0
So
ft r
ot
E
pico
ccum
sp.
0
0 0
0 0
0 1
0 1
0.08
So
ft r
ot
C
onio
thyr
ium
sp.
0
0 0
0 0
4 0
0 4
0.33
Mito
spor
ic M
agna
port
hace
ae
Soft
rot
Phi
alop
hora
sp.
0
0 0
0 0
2 0
0 2
0.17
Mito
spor
ic M
icro
asca
ceae
So
ft r
ot
G
raph
ium
put
redi
nis
0 0
0 0
0 2
5 0
7 0.
58
Soft
rot
Gra
phiu
m s
p.
0 0
0 0
0 0
2 0
2 0.
17
M
itosp
oric
Pez
izac
eae
So
ft r
ot
O
edoc
epha
lum
sp.
0
0 0
0 0
0 1
0 1
0.08
Mito
spor
ic P
eziz
omyc
otin
a
Soft
rot
Toru
la h
erba
rum
0
0 0
0 0
0 1
0 1
0.08
So
ft r
ot
To
rula
sp.
3
0 0
0 0
0 0
0 3
0.25
Mito
spor
ic T
rich
ocom
acea
e
Soft
rot
Pae
cilo
myc
es v
icto
riae
0
0 0
0 1
0 0
7 8
0.67
So
ft r
ot
P
aeci
lom
yces
sp.
4
1 0
1 0
2 0
0 8
0.67
So
ft r
ot
P
enic
illi
um s
p.
10
4 2
2 0
0 1
0 19
1.
58
Soft
rot
Asp
ergi
llus
par
asit
icus
0
0 0
0 0
1 0
0 1
0.08
So
ft r
ot
A
sper
gill
us s
p.
17
2 2
0 0
1 7
4 33
2.
75
Soft
rot
Thy
sano
phor
a pe
nici
llio
ides
0
1 0
0 0
0 0
0 1
0.08
Nec
tric
eae
So
ft r
ot
C
ylin
droc
arpo
n oi
dium
0
0 0
0 0
1 1
0 2
0.17
So
ft r
ot
C
ylin
droc
arpo
n sp
. 3
1 0
1 0
5 12
0
22
1.83
So
ft r
ot
C
ylin
droc
ladi
um s
copa
rium
0
0 0
0 0
0 2
0 2
0.17
So
ft r
ot
F
usar
ium
ven
tric
osum
5
2 0
0 2
26
19
0 54
4.
5
Soft
rot
Fus
ariu
m m
onil
ifor
me
2 0
0 0
0 2
0 2
6 0.
5
Soft
rot
Nec
tria
sp.
0
0 0
0 0
0 3
0 3
0.25
Pleo
spor
acea
e
Soft
rot
Bip
olar
is o
ryza
e 0
0 2
0 0
0 0
8 10
0.
83
Sa
ccha
rom
ycet
acea
e
Non
rot
Can
dida
sp.
0
0 0
0 0
1 9
0 10
0.
83
Sc
opul
ario
psis
109
THE RAFFLES BULLETIN OF ZOOLOGY 2011
App
endi
x 1.
Con
t’d
Cla
ssifi
cati
on
D
ry
W
et
To
tal
%P
hylu
m
Typ
e
G
ener
a/Sp
ecie
s D
ip
Cle
is
BB
D
D
DC
D
ip
Cle
is
BB
Is
o Is
o
of r
ot f
ungi
So
ft r
ot
Sc
opul
ario
psis
asp
erul
a 0
0 0
0 0
0 3
0 3
0.25
Unc
lass
ifi ed
ord
er
Soft
rot
Mam
mar
ia s
p.
0 4
0 0
0 0
0 0
4 0.
33
Non
rot
Pha
eotr
icho
spae
ria
sp.
0 0
0 0
0 0
1 0
1 0.
08
X
ylar
iace
ae
0 0
So
ft r
ot
D
emot
opho
ra s
p.
0 1
0 0
0 0
0 1
2 0.
17
Bas
idio
myc
ota
Aga
rica
ceae
W
hite
rot
Cop
rinu
s sp
. 0
0 0
0 0
1 0
0 1
0.08
Mito
spor
ic A
gari
com
ycot
ina
W
hite
rot
Spor
otri
chum
sp.
3
7 0
0 0
40
9 0
59
4.92
O
omyc
ota
Pyth
iace
ae
Soft
rot
Pyt
hium
sp.
0
0 0
0 0
24
1 0
25
2.09
Z
ygom
ycot
a
C
unni
ngha
mel
lace
ae
Soft
rot
Cun
ning
ham
ella
sp.
0
0 0
0 0
10
0 0
10
0.83
Muc
orac
eae
0
So
ft r
ot
bs
idia
cli
ndro
spor
a 0
1 0
0 0
0 0
0 1
0.08
So
ft r
ot
A
bsid
ia s
p.
0 1
0 0
0 1
4 0
6 0.
5
Soft
rot
Gon
gron
ella
sp.
2
1 0
0 0
0 6
0 9
0.75
So
ft r
ot
M
ucor
sp.
0
2 0
2 0
2 3
0 9
0.75
Mor
tiere
lla
Soft
rot
Mor
tier
ella
sp.
0
0 3
0 0
1 6
0 10
0.
83
Tot
al i
sola
tes
136
195
21
22
37
429
318
41
1199
10
0
Tot
al s
peci
es
23
27
9 11
10
33
40
12
E
xclu
sive
No.
spe
cies
4
5 0
1 1
6 13
3
C
omm
on
D
ip +
Cle
is
10
18
D
ip +
BB
0
2
C
leis
+ B
B
1
1
Dip
+ C
leis
+ B
B
6
4
Dip
=D
ipte
roca
rpus
, Cle
is=
Cle
isto
caly
x, B
B=
Bal
akat
a, D
D=
dead
Dip
tero
carp
us, D
C=
dead
Cle
isoc
alyx
, Tot
al I
so=
tota
l is
olat
e, %
iso
=%
iso
late
.
110
Supa-Amornkul et al.: Wood decay in hornbill nestsA
ppen
dix
1.b)
Ide
ntifi
catio
n an
d nu
mbe
rs o
f fu
ngal
iso
late
s fr
om i
nsid
e an
d ou
tsid
e th
e ca
vitie
s of
Dip
terc
arpu
s an
d C
leis
toca
lyx.
Dry
W
et
Phy
lum
/Spe
cies
D
ipte
rocr
pus
Cle
isto
clay
x D
ipte
roca
rpus
C
leis
tocl
ayx
Insi
de
Out
side
In
side
O
utsi
de
Insi
de
Out
side
In
side
O
utsi
de
Asc
omyc
ota
B
ione
ctri
acea
e
G
lioc
ladi
um r
oseu
m
1
Can
dela
riac
eae
Can
dela
riel
la s
p.
1
1
Cap
nodi
ales
Fum
ago
sp.
3
C
haet
omia
ceae
Ach
aeto
miu
m s
p.
2
C
haet
omiu
m s
p.
1
Cha
etos
phae
riac
eae
Car
poli
gna
sp.
Cod
inae
a sp
.
2
Dip
odas
cace
ae
D
ipod
ascu
s sp
.
2
Gal
acto
myc
es g
eotr
ichu
m
1
Hyp
ocre
acea
e
A
crem
oniu
m s
p.
3
8
2
2 1
Cyl
indr
ocla
dium
sp.
2 3
4
5
1
F
usar
ium
cil
iatu
m
1
F
usar
ium
ros
eum
1
Fus
ariu
m s
olan
i 5
4
9
5 4
3
F
usar
ium
sp.
10
1
49
18
7
18
12
G
lioc
ladi
um v
iren
s 2
9
36
5
40
5
G
lioc
ladi
um v
irid
e
2
Gli
ocla
dium
sp.
22
2
24
1 89
11
21
1
Tric
hode
rma
ham
atum
2
2
Tric
hode
rma
harz
ianu
m
1
1 1
Tric
hode
rma
koni
ngi
1
1
Tr
icho
derm
a sp
iral
e
Tr
icho
derm
a sp
. 24
2
50
3 65
31
65
19
Vert
icil
lium
sp.
3
4
8
1 5
M
icro
asca
ceae
3
Mic
roas
cus
sp.
M
itosp
oric
Asc
omyc
ota
Gli
omas
tix
sp.
1
1
Hum
icol
a sp
. 4
1
1
1
P
apul
aspo
ra s
p.
1
1
P
hom
a sp
.
2
Tr
icho
clad
ium
sp.
3
111
THE RAFFLES BULLETIN OF ZOOLOGY 2011A
ppen
dix
1. C
ont’
d
Dry
W
et
Phy
lum
/Spe
cies
D
ipte
rocr
pus
Cle
isto
clay
x D
ipte
roca
rpus
C
leis
tocl
ayx
Insi
de
Out
side
In
side
O
utsi
de
Insi
de
Out
side
In
side
O
utsi
de
Asc
omyc
ota
M
itosp
oric
Cal
osph
aeri
acea
e
P
hial
opho
ra r
icha
rdsi
ae
3
1
Mito
spor
ic D
erm
atea
ceae
Tric
hosp
orie
lla
sp.
4
Mito
spor
ic E
rem
omyc
etac
eae
Art
hrog
raph
is c
uboi
dea
M
itosp
oric
Lep
tosh
aeri
acea
e
C
onio
thyr
ium
sp.
4
Epi
cocc
um s
p.
1
Mito
spor
ic M
agna
port
hace
ae
P
hial
opho
ra s
p.
2
Mito
spor
ic M
icro
asca
ceae
Gra
phiu
m p
utre
dini
s
2
5
Gra
phiu
m s
p.
1 1
M
itosp
oric
Pez
izac
eae
Oed
ocep
halu
m s
p.
1
Mito
spor
ic P
eziz
omyc
otin
a
To
rula
her
baru
m
1
Toru
la s
p.
3
Mito
spor
ic T
rich
ocom
acea
e
A
sper
gill
us p
aras
itic
us
1
Asp
ergi
llus
sp.
15
2
2
1
7
P
aeci
lom
yces
vic
tori
ae
P
aeci
lom
yces
sp.
4
1
2
Pen
icil
lium
sp.
7
3 4
1
Thy
sano
phor
a pe
nici
llio
ides
1
N
ectr
icea
e
C
ylin
droc
arpo
n oi
dium
1
1
Cyl
indr
ocar
pon
sp.
3
1
5
10
2
C
ylin
droc
ladi
um s
copa
rium
2
Fus
ariu
m m
onil
ifor
me
2
2
F
usar
ium
ven
tric
osum
5
2
17
9
8 11
Nec
tria
sp.
3
Pl
eosp
orac
eae
Bip
olar
is o
ryza
e
Sacc
haro
myc
etac
eae
Can
dida
sp.
1
9
Sc
opul
ario
psis
Scop
ular
iops
is a
sper
ula
3
112
Supa-Amornkul et al.: Wood decay in hornbill nests
App
endi
x 1.
Con
t’d
Dry
W
et
Phy
lum
/Spe
cies
D
ipte
rocr
pus
Cle
isto
clay
x D
ipte
roca
rpus
C
leis
tocl
ayx
Insi
de
Out
side
In
side
O
utsi
de
Insi
de
Out
side
In
side
O
utsi
de
U
ncla
ssifi
ed o
rder
Mam
mar
ia s
p.
3 1
Pha
eotr
icho
spae
ria
sp.
1
Xyl
aria
ceae
Dem
otop
hora
sp.
1
Bas
idio
myc
ota
A
gari
cace
ae
C
opri
nus
sp.
1
M
itosp
oric
Aga
rico
myc
otin
a
Sp
orot
rich
um s
p.
3
7
26
14
9O
omyc
etes
Py
thia
ceae
Pyt
hium
sp.
24
1Z
ygom
ycot
a
Cun
ning
ham
ella
ceae
Cun
ning
ham
ella
sp.
10
M
ortie
rella
ceae
Mor
tier
ella
sp.
1
6
M
ucor
acea
e
A
bisi
dia
clin
dros
pora
1
Abi
sidi
a sp
.
1
1
4
Gon
gron
ella
sp.
2 1
6
Muc
or s
p.
2
2
2 1
Tot
al i
sola
tes
122
14
190
5 33
8 91
25
5 63
Tot
al s
peci
es
21
7 26
3
29
15
37
14
113
THE RAFFLES BULLETIN OF ZOOLOGY 2011
Appendix 2. Properties of wood sampled from Dipterocarpus gracilis, Cleistocalyx nervosum and Balakata baccata (referred to as D. costata, Syzygium cumini, Sapium baccatum, irrespectively in Thonanont et. al, 1985).
Tree species Moisture content Toughness Strength Hardness % kg-m Kg/cm2 kg
Moderate hardwood with high strength
D. gracilis 12 4.03 661 772
Moderate hardwood
C. nervosum 12 2.86 473 809
Softwood
B. baccata 187 1.90 167 176