yuanfei bi, anna porras and tianshu li department of civil

1
Free Energy Landscape and Nucleation Pathways of Gas Hydrate Nucleation Yuanfei Bi , Anna Porras and Tianshu Li Department of Civil and Environmental Engineering The George Washington University In this study, we present an advanced computational strategy integrating forward flux sampling, backward flux sampling, and P B histogram analysis to investigate hydrate nucleation. 1 Through this strategy, we pursue a quantitative, “ first-principle” description of the free energy landscape and molecular pathways of hydrate formation. The calculated distribution profile was found to fit reasonably well against the classical nucleation theory. Structural analysis of the obtained ensemble of nucleation pathways obtained clearly suggests that, on an average, hydrate formation is facilitated through a “two-step” like, amorphous to crystal transition. However the analysis also clearly reveals the structural diversity in nucleation pathways, particularly the existence of the direct crystallization trajectories without going through the amorphous stage. Objective: To obtain methane hydrate nucleation mechanisms supported by sufficient statistical sampling. Conclusions Gas hydrates are solid compounds composed of water and guest molecules(CH 4 , CO 2 , etc). [1]: Yuanfei Bi Anna Porras and Tianshu Li, J. Chem. Phys. 145.21 (2016): 211909 [2]: Rosalind.J. Allen, Daan. Frenkel, and Peter. R. ten Wolde, J. Chem. Phys. 124, 024102 (2006) [3]: Yuanfei Bi and Tianshu Li, J. Phys. Chem. B. 118, 167402 (2014) Molecular Dynamics(MD) simulation Method s Methods(Cont.) Results(Cont.) References Introduction Future energy Major carrier of carbon Flow assurance Global climate change obtain molecular details of hydrate nucleation insufficient temporal and spatial experimental resolution Forward Flux Sampling(FFS) method 2 A B λ obtain rate constant k AB explicitly Independent of nucleation theory High efficiency (closer to realistic conditions) Sufficient sampling (various nucleation trajectories) An order parameter λ is needed for FFS 5 12 6 3 sI 5 12 6 4 sII 5 12 5 12 6 2 between sI and sII 5 12 5 12 6 2 5 12 6 4 5 6 5 6 6 5 6 6 2 5-member ring 6-member ring ring half cage 5 12 6 3 between sI and sII complete cage We have developed a new order parameter half-cage order parameter (H-COP) the # of water molecules of the largest hydrate-like cluster 3 p B histogram test of H-COP order parameter bad order parameter A B λ λ P B A B λ λ good order parameter P B Results Free energy profile of hydrate nucleation p B histogram of H-COP order parameter can be reasonably fitted by Gaussian distribution statistical results from FFS one typical two-step trajectory Co-existence of multiple nucleation pathways Importantly, there also do exist one-step nucleation pathways! H-COP is capable of describing hydrate nucleation pathway well! We developed a new computational strategy that allows obtaining both the free energy profile and transition pathway of hydrate nucleation, independent of any nucleation theory. The validity of our strategy was verified by rigorous p B histogram analysis. Intriguingly the free energy profile of hydrate nucleation was shown to be classical-like, regardless of the overall non-classical molecular pathway. We propose a new mechanism for hydrate nucleation: It is an entropically driven, kinetic process that proceeds via multiple pathways with nearly degenerate free energy profiles.

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Page 1: Yuanfei Bi, Anna Porras and Tianshu Li Department of Civil

Free Energy Landscape and Nucleation Pathways of Gas Hydrate NucleationYuanfei Bi, Anna Porras and Tianshu Li

Department of Civil and Environmental Engineering The George Washington UniversityIn this study, we present an advanced computational strategy integrating forward flux sampling, backward flux sampling, and PB histogram analysis to investigate hydrate nucleation.1 Through this strategy, we pursue a quantitative, “ first-principle” description of the free energy landscape and molecular pathways of hydrate formation. The calculated distribution profile was found to fit reasonably well against the classical nucleation theory. Structural analysis of the obtained ensemble of nucleation pathways obtained clearly suggests that, on an average, hydrate formation is facilitated through a “two-step” like, amorphous to crystal transition. However the analysis also clearly reveals the structural diversity in nucleation pathways, particularly the existence of the direct crystallization trajectories without going through the amorphous stage.

Objective: To obtain methane hydrate nucleation mechanisms supported by sufficient statistical sampling.

Conclusions

Gas hydrates are solid compounds composed of water and guest molecules(CH4, CO2, etc).

[1]: Yuanfei Bi Anna Porras and Tianshu Li, J. Chem. Phys. 145.21 (2016): 211909 [2]: Rosalind.J. Allen, Daan. Frenkel, and Peter. R. ten Wolde, J. Chem. Phys. 124, 024102 (2006)

[3]: Yuanfei Bi and Tianshu Li, J. Phys. Chem. B. 118, 167402 (2014)

• Molecular Dynamics(MD) simulationMethods

Methods(Cont.) Results(Cont.)

References

Introduction

• Future energy • Major carrier of carbon • Flow assurance

• Global climate change

• obtain molecular details of hydrate nucleation • insufficient temporal and spatial experimental resolution

• Forward Flux Sampling(FFS) method2

A

B

λ

• obtain rate constant kAB explicitly • Independent of nucleation theory • High efficiency (closer to realistic

conditions) • Sufficient sampling (various

nucleation trajectories)

An order parameter λ is needed for FFS

51263

sI

51264

sII

512

51262 between sI and sII

512 51262 51264

56 566 5662

5-member ring 6-member ring

ring

half cage

51263

between sI and sII

complete cage

We have developed a new order parameter half-cage order parameter (H-COP) the # of water molecules of the largest hydrate-like cluster3

pB histogram test of H-COP order parameter

bad order parameter

A

B

��⇤

PB

A B

��⇤

good order parameter PB

Results

Free energy profile of hydrate nucleation

pB histogram of H-COP order parameter can be reasonably fitted by Gaussian distribution

statistical results from FFS one typical two-step trajectoryCo-existence of multiple nucleation pathways

Importantly, there also do exist one-step nucleation pathways!

H-COP is capable of describing hydrate nucleation pathway well!

• We developed a new computational strategy that allows obtaining both the free energy profile and transition pathway of hydrate nucleation, independent of any nucleation theory.

• The validity of our strategy was verified by rigorous pB histogram analysis.

• Intriguingly the free energy profile of hydrate nucleation was shown to be classical-like, regardless of the overall non-classical molecular pathway.

• We propose a new mechanism for hydrate nucleation: It is an entropically driven, kinetic process that proceeds via multiple pathways with nearly degenerate free energy profiles.