za classic problem in computer science! zdata requested in sorted order ye.g., find students in...

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A classic problem in computer science! Data requested in sorted order e.g., find students in increasing cap order Sorting is used in many applications First step in bulk loading operations. Sorting useful for eliminating duplicate copies in a collection of records (How?) Sort-merge join algorithm involves sorting. Problem: sort 1Gb of data with 1Mb of RAM. External Sorting

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Page 1: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

A classic problem in computer science!Data requested in sorted order

e.g., find students in increasing cap orderSorting is used in many applications

First step in bulk loading operations. Sorting useful for eliminating duplicate copies in a collection

of records (How?) Sort-merge join algorithm involves sorting.

Problem: sort 1Gb of data with 1Mb of RAM.

External Sorting

Page 2: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

2-Way Sort: Requires 3 Buffers

Pass 1: Read a page, sort it, write it. only one buffer page is used

Pass 2, 3, …, etc.: three buffer pages used.

Main memory buffers

INPUT 1

INPUT 2

OUTPUT

DiskDisk

Page 3: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Two-Way External Merge Sort

Each pass we read + write each page in file.

N pages in the file => the number of passes

So total cost is:

Idea: Divide and conquer: sort

subfiles and merge

log2 1N

2 12N Nlog

Input file

1-page runs

2-page runs

4-page runs

8-page runs

PASS 0

PASS 1

PASS 2

PASS 3

9

3,4 6,2 9,4 8,7 5,6 3,1 2

3,4 5,62,6 4,9 7,8 1,3 2

2,34,6

4,7

8,91,35,6 2

2,3

4,46,7

8,9

1,23,56

1,22,3

3,4

4,56,6

7,8

Page 4: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

General External Merge Sort

To sort a file with N pages using B buffer pages: Pass 0: use B buffer pages. Produce sorted runs of B pages

each. Pass 2, …, etc.: merge B-1 runs.

N B/

B Main memory buffers

INPUT 1

INPUT B-1

OUTPUT

DiskDisk

INPUT 2

. . . . . .

. . .

More than 3 buffer pages. How can we utilize them?

Page 5: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Cost of External Merge Sort

Number of passes:Cost = 2N * (# of passes)E.g., with 5 buffer pages, to sort 108 page file:

Pass 0: = 22 sorted runs of 5 pages each (last run is only 3 pages)

Pass 1: = 6 sorted runs of 20 pages each (last run is only 8 pages)

Pass 2: 2 sorted runs, 80 pages and 28 pages Pass 3: Sorted file of 108 pages

1 1 log /B N B

108 5/

22 4/

Page 6: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Number of Passes of External Sort

N B=3 B=5 B=9 B=17 B=129 B=257100 7 4 3 2 1 11,000 10 5 4 3 2 210,000 13 7 5 4 2 2100,000 17 9 6 5 3 31,000,000 20 10 7 5 3 310,000,000 23 12 8 6 4 3100,000,000 26 14 9 7 4 41,000,000,000 30 15 10 8 5 4

Page 7: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Sequential vs Random I/Os

Is minimizing passes optimal? Would merging as many runs as possible the best solution?

Suppose we have 80 runs, each 80 pages long and we have 80 pages of buffer space.

We can merge all 80 runs in a single pass each page requires a seek to access (Why?) there are 80 pages per run, so 80 seeks per run total cost = 80 runs X 80 seeks = 6,400 seeks

Page 8: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Sequential vs Random I/Os (Cont)We can merge all 80 runs in two steps

5 sets of 16 runs eachread 80/16=5 pages of one run 16 runs result in sorted run of 1280 pageseach merge requires 80/5X16 = 256 seeks for 5 sets, we have 5X256 = 1280 seeks

merge 5 runs of 1280 pages read 80/5=16 pages of one run => 1280/16=80 seeks in total5 runs => 5X80 = 400 seeks

total: 1280+400=1680 seeks!!!Number of passes increases, but number of seeks

decreases!

Page 9: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Using B+ Trees for Sorting

Scenario: Table to be sorted has B+ tree index on sorting column(s).

Idea: Can retrieve records in order by traversing leaf pages.

Is this a good idea?Cases to consider:

B+ tree is clustered -- Good idea! B+ tree is not clustered -- Could be a very bad idea!

Page 10: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Clustered B+ Tree Used for Sorting

Cost: root to the left-most leaf, then retrieve all leaf pages (<key,record> pair organization)

If <key, rid> pair organization is used? Additional cost of retrieving data records: each page fetched just once.

Always better than external sorting!

(Directs search)

Data Records

Index

Data Entries("Sequence set")

Page 11: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Unclustered B+ Tree Used for Sorting

each data entry contains <key,rid > of a data record. In general, one I/O per data record!

(Directs search)

Data Records

Index

Data Entries("Sequence set")

Page 12: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Summary

External sorting is important; DBMS may dedicate part of buffer pool for sorting!

External merge sort minimizes disk I/O cost: Pass 0: Produces sorted runs of size B (# buffer pages). Later

passes: merge runs. # of runs merged at a time depends on B, and block size. Larger block size means less I/O cost per page. Larger block size means smaller # runs merged. In practice, # of runs rarely more than 2 or 3.

Clustered B+ tree is good for sorting; unclustered tree is usually very bad.

Page 13: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Database Tuning

Database Tuning is the activity of making a database application run more quickly. “More quickly” usually means higher throughput, though it may mean lower response time for

time-critical applications.

Page 14: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

1 - Basic Principles 14

Tuning Principles

Think globally, fix locallyPartitioning breaks bottlenecks

(temporal and spatial)Start-up costs are high; running costs

are lowRender onto server what is due onto

ServerBe prepared for trade-offs (indexes

and inserts)

Page 15: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

Tuning MindsetSet reasonable performance tuning goalsMeasure and document current performance Identify current system performance bottleneck Identify current OS bottleneckTune the required components eg: application,

DB, I/O, contention, OS etcTrack and exercise change-control proceduresMeasure and document current performanceRepeat step 3 through 7 until the goal is met

Page 16: ZA classic problem in computer science! zData requested in sorted order ye.g., find students in increasing cap order zSorting is used in many applications

1 - Basic Principles 16

Goals Met?

Appreciation of DBMS architectureStudy the effect of various

components on the performance of the systems

Tuning principleTroubleshooting techniques for

chasing down performance problemsHands-on experience in Tuning