1 impact of bioinformatics in our life and bme engineer responsibility dr fadhl alakwaa...
TRANSCRIPT
1
Impact of Bioinformatics in our life and BME engineer
responsibility
Dr Fadhl Alakwaafadhl-alakwa.weebly.com
OUTCOMESHow much we know about our biological system?
55
4
http://www.pbs.org/wgbh/pages/frontline/shows/teenbrain/work/how.html10/12/2013
There are 4 nucleotide A G C T
DNA is composed of nucleotide
99
3
Phosphate
Sugar
Nitrogenous base
A
A
T
G
C
10/12/2013
11
A C G T A C G T
ACG
TACG
T
No of base pairs= Genome SizeHG= 3200 Mbp (Mb)
5 DNA is double strand connected with hydrogen bounds
10/12/2013
13
SEQ 1: AAAATTTTTTGGGGGGGGCCCCCCCCCCCCCCCCCC
7 How many different sequences we get?
SEQ 2: AAAATTTTTTGGGGGGGGCCCCCCCCCCCACCCCCC
SEQ N: AAAATTTTTTGGGGGGGGCCCCCCCCCCCCCCCCCA
10/12/2013
14
SEQ 1: AAAATTTTTTGGGGGGGGCCCCCCCCCCCCCCCCCC
7 How many different sequence we get?
SEQ 2: AAAATTTTTTGGGGGGGGCCCCCCCCCCCACCCCCC
SEQ N: AAAATTTTTTGGGGGGGGCCCCCCCCCCCCCCCCCA
4^ 3200 X10^6
10/12/2013
OUTCOMES• Yes we are different because we
came from different sequence.
• Twins has the same DNA sequence
1515
2
10/12/2013
16
SEQ 1: AAAATTTTTTGGGGGGGGCCCCCCCCCCCCCCCCCC
8 Data bases for all organism
SEQ 2: AAAATTTTTTGGGGGGGGCCCCCCCCCCCACCCCCC
SEQ N: AAAATTTTTTGGGGGGGGCCCCCCCCCCCCCCCCCA
4^ 3200 X10^6
10/12/2013
OUTCOMESWhat is our role in solving life big mystery? BME
• Search and storage • Sequence alignment• 3D structure predication• Computational biology• System biology• Bioinformatics• Gene function ontology• Drug discovery
1919
5
10/12/2013
OUTCOMESWhat is our role in solving life big mystery? BME
• DNA sequencer• M-RNA analysis• PCR• Electrophoresis
2121
5
10/12/2013
Cell function = proteins
Protein is composed of amino acids
2222
1Amino acid
A
A
F
N
G
G
ST
S
D
K
COO-NH3+ C
R
HAmino group Carboxylic
acid group
10/12/2013