10. vaughan et al., 2009
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10. Vaughan Et Al., 2009TRANSCRIPT
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AQUATIC CONSERVATION: MARINE AND FRESHWATER ECOSYSTEMS
Aquatic Conserv: Mar. Freshw. Ecosyst. 19: 113125 (2009)
Published online 9 October 2008 in Wiley InterScience(www.interscience.wiley.com) DOI: 10.1002/aqc.895
VIEWPOINT
Integrating ecology with hydromorphology: a priority for riverscience and management
I.P. VAUGHANa,*, M. DIAMONDb, A.M. GURNELLc, K.A. HALLb, A. JENKINSd, N.J. MILNERe,L.A. NAYLORf, D.A. SEARg, G. WOODWARDh and S.J. ORMERODa
aCatchment Research Group, Cardi School of Biosciences, Cardi University, Cardi CF10 3US, UKbEnvironment Agency, North West Region, Richard Fairclough House, Knutsford Road, Warrington WA4 1HG, UK
cDepartment of Geography, Kings College London, Strand, London WC2R 2LS, UKdCentre for Ecology and Hydrology, Wallingford, Oxfordshire, OX10 8BB, UK
eNational Fisheries Technical Team, Environment Agency, University of Bangor, School of Biological Sciences, Deiniol Road,
Bangor, Gwynedd LL57 2UW, UKfDepartment of Geography, University of Exeter, Cornwall Campus, Treliever Road, Penryn, Cornwall, TR10 9EZ, UK
gSchool of Geography, University of Southampton, Higheld, SO17 1BJ, UKhSchool of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
ABSTRACT
1. The assessment of links between ecology and physical habitat has become a major issue in river research andmanagement. Key drivers include concerns about the conservation implications of human modications (e.g.abstraction, climate change) and the explicit need to understand the ecological importance of hydromorphologyas prescribed by the EUs Water Framework Directive. Eorts are focusing on the need to develop eco-hydromorphology at the interface between ecology, hydrology and uvial geomorphology. Here, the scope ofthis emerging eld is dened, some research and development issues are suggested, and a path for development issketched out.2. In the short term, major research priorities are to use existing literature or data better to identify patterns
among organisms, ecological functions and river hydromorphological character. Another early priority is toidentify model systems or organisms to act as research foci. In the medium term, the investigation of patternprocesses linkages, spatial structuring, scaling relationships and system dynamics will advance mechanisticunderstanding. The eects of climate change, abstraction and river regulation, eco-hydromorphic resistance/resilience, and responses to environmental disturbances are likely to be management priorities. Large-scalecatchment projects, in both rural and urban locations, should be promoted to concentrate collaborative eorts,to attract nancial support and to raise the prole of eco-hydromorphology.3. Eco-hydromorphological expertise is currently fragmented across the main contributory disciplines (ecology,
hydrology, geomorphology, ood risk management, civil engineering), potentially restricting research anddevelopment. This is paradoxical given the shared vision across these elds for eective river management basedon good science with social impact. A range of approaches is advocated to build sucient, integrated capacitythat will deliver science of real management value over the coming decades.Copyright # 2008 John Wiley & Sons, Ltd.
Received 23 February 2007; Revised 11 June 2007; Accepted 1 July 2007
KEY WORDS: ecology; geomorphology; hydrology; hydromorphology; rivers; Water Framework Directive
*Correspondence to: Dr Ian Vaughan, Catchment Research Group, Cardi School of Biosciences, Cardi University, Cardi CF10 3US,UK. E-mail: [email protected]
Copyright # 2008 John Wiley & Sons, Ltd.
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INTRODUCTION
For over 40 years, issues of water quality have dominated river
research, management and conservation}driven by seminalpublications (e.g. Hynes, 1960), by widespread problems from
point or diuse pollution sources, and by major legislation (e.g.
the UK Water Acts of 1973, 1983; the US Clean Water Act
1977). Although interest in relationships between river organisms
and their physical habitat is also long-standing (e.g. Riley, 1921;
Percival and Whitehead, 1929), emphasis on this has generally
been less. This balance is currently being re-dressed for several
reasons. Globally, there is a need to understand the ecological
eects of a wide range of changes in physical habitat, as rivers are
increasingly exploited, regulated or otherwise modied through
ood-defence engineering, impoundment, river restoration,
climate change and the spread of alien species. Across Europe,
the Water Framework Directive (WFD; 2000/60/EC) has been
the major legislative driver by specifying that hydromorphology
should underpin good ecological status (European Commission,
2000). The improvements in water quality in Europe and North
America over recent decades mean that hydromorphic limits on
ecological quality are becoming increasingly apparent. Finally,
the recognition that these problems require multi-disciplinary
solutions has stimulated dialogue between physical scientists and
biologists whose shared vision is of more eective river science
and management.
River conservation has much to gain in this renewed push
for an improved understanding of ecologyphysical habitat
relationships. Hydromorphological integrity is central to
conservation since it provides the template upon which all
other ecological structures and functions are built. Furthermore,
in seeking good ecological status by sensitive management at
whole basin scales, rather than in the channel or riparian zone
alone, the WFD has become a highly signicant element in
wider river conservation. With hydromorphology an explicit
component of the Directive, the need to understand links to
ecology and conservation are clear.
Three important observations can be made regarding the links
between river ecology and hydromorphology. First, current
scientic understanding is generally poor, especially at the
quantitative levels required for eective prediction and
management. This is despite scientic literature stretching back
more than 80 years (Riley, 1921; Percival and Whitehead, 1929),
and comprising many thousands of peer-reviewed publications.
Numerous } mainly observational } studies have described
links between biological pattern, ecological processes, and river
form and physical processes, yet the underlying mechanisms are
often known only in outline. Relationships in riparian and
oodplain environments are less widely studied than those in the
wetted channel, highlighting the need to consider whole
catchments and river landscapes in the development of eco-
hydromorphic research (Eyre et al., 2002).
Secondly, improved understanding of ecologyhydro-
morphology is a pressing need if the timetable and aims of key
river legislation are to be met (e.g. for statutory regulation or
programmes of measures under the WFD). Major challenges
arise in distinguishing the inuences of hydromorphic
modications on organisms or processes from other potentially
confounding eects such as pollution (Allan, 2004). Biological
indicators of physical modication are still preliminary, rarely
described or poorly founded, while few biological models
diagnose how physical eects contribute to biological
departures from expected conditions (Davies et al., 2000). The
denition of expected or reference conditions as required by the
WFD is challenging given the inherent variability in both physical
habitat and biology (Nijboer et al., 2004).
Finally, the need to understand ecologyhydromorphology
linkages is accentuated by the prospects of climate change,
altered ow regimes and increased water consumption
(Jackson et al., 2001). It is vital that such changes are both
understood and clearly communicated to practitioners if river
environments are to be managed eectively in future. River
environments appear to be highly sensitive to climatic eects,
but features that mitigate impacts or increase ecological
resilience are poorly understood (Durance and Ormerod,
2007).
In this viewpoint paper, we consider the interface between
river ecology and hydromorphology: its scope, major research
and development issues, and sketch out a path for the
development of eco-hydromorphic research. Our aims are
to draw attention to the need for better science that links the
physical and ecological dimensions of rivers; to encourage
better collaboration; to prompt sponsoring agencies to
recognize the gaps; and to prompt bodies responsible for
river management to recognize the need. Some areas are
identied in which collaboration could be most eective.
Naturally, the issues raised reect the perspectives of the
authors, and are indicative rather than denitive. It is hoped,
nevertheless, that this stimulates a wider debate.
ECO-HYDROMORPHOLOGY: THE INTER-DISCIPLINARY INTERFACE
Several terms have been applied to the relationships between
organisms and physical habitats in rivers. Examples include
biogeomorphology (Viles, 1988), ecogeomorphology (Parsons
et al., 2003), ecohydrology or hydroecology (Wassen
and Grootjans, 1996), eco-hydromorphology (Clarke et al.,
2003) and geobiology (Noke, 2005). Here, we adopt eco-
hydromorphology, since it captures the main contributory
disciplines (ecology, hydrology and geomorphology). More
pertinently, this term is consistent with the WFD which uses
hydromorphology to describe the hydrologic and geomorphic
elements of river habitats (European Commission, 2000).
Eco-hydromorphology can be dened as the interactions of
the biological entities and ecological processes of a river with
the hydrological and geomorphological form and dynamics. In
this context:
* eco- encompasses riverine biota at all levels of
organization (from genes, through individuals,
populations and communities, to whole ecosystems), all
taxonomic levels and across all functional groupings (e.g.
primary producers, detritivores). It includes ecological
processes manifested in individuals through to entire
ecosystems (e.g. dispersal, reproduction, decomposition),
and which act over a wide range of timescales from the
immediate to the evolutionary (Townsend and Hildrew,
1994) and all spatial scales from local to lifetime
movements (Durance et al., 2006).* hydromorphology describes the geomorphology and
hydrology of a river system, their interactions, and their
arrangement and variability in space and time. Key
elements include the ow (sensu Po et al., 1997) and
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sediment regimes; channel and oodplain dimensions,
topography and substratum; continuity and connectivity
(longitudinal, lateral, vertical and temporal); hydrological
and geomorphological processes (e.g. sediment transport);
and the spatio-temporal arrangement of the hydromor-
phological components (European Commission, 2000;
Gilvear et al., 2004). Articial features (e.g. bank
protection works, weirs) and human modications to
processes are also included.* interactions } the mechanisms by which hydromorphology
and ecology aect one another. Hydromorphology may
inuence ecology, such as the eects of ow velocity on
macrophyte photosynthesis (Madsen et al., 1993) or the role of
hydromorphology in selecting assemblages of organisms with
appropriate traits (Townsend and Hildrew, 1994). Conversely,
organisms may aect hydromorphology, such as the impact of
biolms on ow characteristics (Battin et al., 2003) or the
impacts of invertebrates on sediment stability and release
(Edwards, 1968).
Eco-hydromorphology extends beyond ecology, geomor-
phology and hydrology into other contributing elds (e.g.
civil engineering, economics, social sciences) and the majority
of research is not labelled as being eco-hydromorphic (or any
of the other phrases coined) per se. Similarly, it spans both
pure and applied science, academia and regulatory agencies.
This diversity has increasingly been recognized, along with
the consequent needs to engage a disparate research and
management community, and to foster greater inter-
disciplinary collaboration (Gurnell et al., 2000; Hannah
et al., 2004). Unfortunately, there is little evidence that these
developments are reected in the composition of research
programmes. Hannah et al. (2004) assessed the authorship of
research papers involving the term ecohydrology (and
derivatives thereof) and found that collaborating university
researchers very rarely came from more than one academic
department. It seems that while the eco-hydromorphic
interface can be clearly dened, it is poorly developed, and
unless this situation can be addressed it could seriously
handicap the development of the science.
KEY RESEARCH AND DEVELOPMENT ISSUESIN ECO-HYDROMORPHOLOGY
Process and causality
Most eco-hydromorphic research has relied upon correlating
static ecological and hydromorphological patterns, using
space-for-time substitutions. Documenting such patterns is
typically the rst stage in the development of a research area,
from which more detailed mechanistic understanding can
develop (Gaston and Blackburn, 1999). In isolation, such
research creates a relatively weak science base, and so
eco-hydromorphology needs to move towards the use of
stronger inference (e.g. experimentation) and studying
underlying mechanisms wherever possible. The next step in
this direction involves the study of dynamics and process rates,
rather than static patterns. Ultimately, there is a need to
understand how eco-hydromorphic processes generate
observed patterns, and in turn how patterns inuence
processes. An example is the way in which vegetation and
sediments interact to shape river channels and ow
characteristics, and, in turn, vegetation recruitment and
sediment transport (Gran and Paola, 2001; Gurnell and
Petts, 2002). The ultimate aim is to achieve a causal
understanding of how the components of the ecology
hydrologygeomorphology interface interact.
River management would benet greatly from
understanding eco-hydromorphic mechanisms, as this would
provide a rm foundation for predicting the eects of
both management interventions and more gradual, longer-
term environmental changes. Currently, the challenge for
prediction stems from the novel combinations of
hydromorphic conditions that may be created. In the
UK, for example, climate change is generally predicted to
increase the seasonality of rainfall and runo (Kay et al.,
2006). This may produce novel environmental conditions,
which could have major ramications for eco-
hydromorphology. Similarly, the ecological responses to river
restoration may be dicult to predict, because specic
structural changes to geomorphology may be made without
altering the formative processes (Sear, 1994) } in eect thispartially or temporarily decouples recognized hydromorphic
processes and forms. To predict the eects of such changes,
models are asked to extrapolate outside currently observed
conditions, and these are the circumstances in which
correlation-based science and models often fail (Sutherland,
2006). In contrast, the underlying mechanisms that link
ecology, hydrology and geomorphology should remain
fundamentally unchanged, and so provide a foundation for
more reliable predictions.
Studying mechanisms, as opposed to correlations, presents a
major challenge. Temporal changes in patterns (e.g. channel
form or invertebrate assemblages) can provide detailed
information about process rates. Fluvial geomorphology
provides good examples, such as quantifying sediment
transport rates using temporal series of channel form records
(Fuller et al., 2002; Lane et al., 2003). However, the nancial and
logistical demands of research spanning many years frequently
restricts opportunities, despite widespread recognition of the
value of research carried out over large spatial and/or temporal
extents, such as the Long Term Ecological Research Network
(Symstad et al., 2003). Equally, management often requires rapid
appraisals (ecological or environmental), which may preclude
temporal monitoring. Progress requires concerted research
eort to address the two-way patternprocess interaction,
helping to identify, for example, how valuable patterns
recorded at a single point in time are for inferring information
about eco-hydromorphic processes.
The role of spatial structure
The spatial conguration of river hydromorphology, and how
it changes over time, has diverse eects upon river ecology
(Wiens, 2002). As a consequence, eco-hydromorphology is
more than an inventory of parts and processes. Potentially
important spatial structures can be identied across a wide
range of scales, from the properties of individual sediment
particles, through the arrangement of biotopes in a reach, to
the large-scale spatial context, including the conguration of
drainage networks and neighbouring catchments. Salmonids
are among the best-studied organisms in the context of spatial
structure, because of the long-standing recognition of both
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their migratory movements and the use of dierent habitat
types for spawning and for dierent developmental stages
(Bardonnet and Baglinere, 2000). The role of barriers}
especially articial features (e.g. weirs)} is an important topicin salmonid research (Morita and Yokota, 2002; Woord
et al., 2005). Spatial structure is a key characteristic, as the
signicance of such barriers depends not only on their
particular characteristics } their permeability to sh underdierent ow conditions } but also their location within the
river network (Fagan, 2002).
To elucidate the role of spatial structure in eco-hydro-
morphology, there is a need to identify: (i) the key spatial
characteristics for organisms and how these dier between
life-stages; (ii) how the activities of organisms spatially
structure the hydromorphology; (iii) how physical structure
inuences ecological, physical and eco-hydromorphic
processes; and (iv) ecologically meaningful ways of
quantifying structure. This applies both within the wetted
channel, and to the linkages between the channel and the wider
riverine landscape (Wiens, 2002; Brierley et al., 2006). An
example of these issues is provided by patch boundaries
and ecotones, which are thought to play important roles in
modulating eco-hydromorphic processes and the movements
of organisms (Ward and Wiens, 2001). The most obvious
boundary is the river shoreline, with terrestrialaquatic
interchanges making important contributions to riverine
ecosystems (Nakano and Murakami, 2001). Recent research
has focused upon shoreline length and complexity (Van der
Nat et al., 2002) and how it relates to a range of organisms
and ecological processes, through such mechanisms as increased
water retention and availability of lentic habitats (Reckendorfer
et al., 1999; Schiemer et al., 2001). This research suggests that
shoreline length could be a relatively simple, yet ecologically-
relevant measure for a range of organisms. In the opposite
direction, ecological processes aect shoreline structure (e.g. via
bank stabilization by growing vegetation and hydraulic eects of
large wood in the channel; Gurnell et al., 2002), providing an
example of ecological processes interacting with hydromorphic
patterns.
The capacity to study spatial structure has increased
dramatically. Technological developments make it possible to
capture patterns over larger areas and at higher resolutions
than ever before, and to analyse the large, complex data sets
that result (Ehlers et al., 2006). The accompanying theory
has also developed, and disciplines such as landscape
ecology provide valuable ideas (ONeill et al., 1988;
Gustafson, 1998).
Scale and variability
The changing uxes of organisms, materials and energy in
space and time, diering across scales, presents a research
challenge. This complexity is not discussed here, but some
generic points are made about scale and variability in eco-
hydromorphic research.
Scale
The results of research are conditional upon the scale(s) of
observation (Wiens, 1989). For example, the relationships
between organisms and their environment may appear to
change with the scale of observation in both space and time
(Wiley et al., 1997; Malmqvist, 2002). Hence, to understand a
process, the correct scale(s) must be chosen when studying it.
Organism body size and life cycle have major inuences, such
that smaller organisms with rapid generations (e.g. bacteria,
fungi and algae) interact with river structure over very dierent
spatio-temporal extents from mammals, birds and sh. At one
extreme, large populations of some organisms are contained
within just one river biotope. At the other, many individual
biotopes can be contained within the home range of a single
organism (Woodward and Hildrew, 2002).
Scaling eects also have ramications for monitoring,
assessment and management, all of which are likely to be
enhanced by selecting appropriate scales for the interactions
of interest. To support these aims, research designs should
include scales of management relevance (Vaughan and
Ormerod, 2003; Durance et al., 2006). In the UK, this could
include reach-scale (ca 500m) units, water bodies, catchments
and river basin districts. Equally, monitoring and
bioassessment need to be aware of the timescales over which
ecological, hydrological and geomorphological patterns and
processes respond to environmental change. An obvious
example is the potential lag in ecological responses to
hydromorphic changes, such as those in the ow regime
following impoundment (Martinez et al., 1994; Kruk and
Penczak, 2003). Management needs to be exible, adopting
scales that research reveals to be critical for eco-hydromorphic
processes.
In lieu of an a priori knowledge of the important scales,
multi-scale studies (in time and/or space) provide a way of
discovering them or insuring against missing critical scales.
Multi-scale studies are relatively well established in river
systems as a consequence of the explicitly hierarchical
organization of rivers (Frissell et al., 1986). Studies focusing
on individual sites and reaches could benet from the addition
of larger-scale factors, as they provide context for individual
sites and may allow the conclusions from small-scale studies
to be more readily generalized (Wiens, 2002). Equally, short
duration studies may benet from longer-term monitoring
data to provide context (Bradley and Ormerod, 2002).
The ultimate aim is to achieve cross-scale understanding in
eco-hydromorphology, revealing the potential ramications of
processes or management interventions on organisms and
processes across spatial and temporal scales. Damming a river,
for example, has eects both locally (e.g. habitat
fragmentation and altered physical structure) and across the
entire river system (e.g. eects on river regime or migratory
organisms) (Allan, 1995). New methods for data analysis may
need to be devised or introduced to eco-hydromorphology to:
(i) reveal cross-scale pattern and process relationships; and (ii)
facilitate scaling up of results from the small spatio-temporal
scales often amenable to research, to larger scales relevant to
management (Phillips, 2005).
Variability
The variability and dynamics of river environments present a
serious research challenge, yet need to be understood for
successful river management (Thoms, 2006). In the rst
instance, empirical study is required to characterize the
variation that occurs (including rates and magnitudes of
change) and this needs to be followed by an understanding of
the role of variability in eco-hydromorphic processes. From a
conservation viewpoint, the observed variability is important
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to the functioning of river ecosystems (Thoms, 2006), and so
needs to be preserved as part of conservation management.
Eco-hydromorphic variation has been studied over a wide
range of spatial and temporal extents} the latter often in thecourse of long-term monitoring, such as ow gauging (Sheer
et al., 2003), retrospective aerial photograph/map analyses of
geomorphology (Tiegs and Pohl, 2005) and annual river bird
surveys (Carter, 1989). Long-term monitoring can provide
invaluable information about the behaviour of river systems,
as can palaeohydrological investigations that extend the study
of river variability over hundreds or thousands of years, or
even into longer geological and evolutionary time-scales (Sear
and Arnell, 2006). Methodological improvements, both in
terms of data collection (e.g. increased accuracy and precision
of remote sensing) and analysis (e.g. spatio-temporal statistics)
have greatly increased the potential to study variability, yet
major gaps in understanding remain (Thoms, 2006).
Alongside the characterization of variation, frameworks/
paradigms are needed to incorporate it into
eco-hydromorphology. Concepts such as meta-stability,
where a system is considered to vary within certain
boundaries } unless subjected to major perturbations } are
valuable (ONeill et al., 1989). Much emerging theory in eco-
hydromorphology places variability at its core, such as the
concepts of ood pulses (Junk et al., 1989), ow pulses
(Tockner et al., 2000) and the natural river regime (Po et al.,
1997). This trend needs to continue, acknowledging variability
in river ecology, hydrology and geomorphology, and their
interactions.
The ramications of eco-hydromorphic variability are less
clearly understood. In part, this stems from the diculty of
capturing temporal variation in the short time-scales employed
in most research. When spatio-temporal variability is
examined explicitly, more detail can be revealed about the
underlying processes. For example, Langhans and Tockner
(2006) revealed marked dierences in leaf litter decomposition
rates on the river Tagliamento oodplain according to the
durations and frequencies of inundation. In the Colorado
River basin, Cooper et al. (2003) found variations in the
patterns of Populus and Tamarix recruitment that
corresponded to the frequency and magnitude of high and
low ow events revealed by long-term gauging data. Making
the links between variability and processes is therefore a clear
research priority.
The spatio-temporal variability observed in rivers has been
greatly altered by several thousand years of anthropogenic
changes in catchment vegetation cover and land use (Birks
et al., 1988), and} more recently} by direct modications tohydromorphology (e.g. ood defences). For most research and
management processes, the dynamics within these existing,
modied systems are of great interest. However, understanding
natural systems is also important, for example in studying
hydromorphic processes and acting as references against which
modied dynamics can be compared (Tockner et al., 2003), but
to do so requires the eects of widespread modication to be
circumvented. Coupled palaeohydrological and palaeo-
ecological studies examining the behaviour of rivers prior to
major human modications provide one possibility (Brown,
2002). Another approach is through the direct observation of
relatively undisturbed rivers. In Europe, such systems are rare
} and therefore valuable (e.g. Fiume Tagliamento; Tockneret al., 2003). Both approaches have weaknesses, stemming from
incomplete information in reconstructing the past or questions
over the generality of model rivers, but nevertheless can
provide unique insights into the behaviour of natural rivers.
Eco-hydromorphic responses to environmental change
An understanding of how river systems respond to environ-
mental (external) changes is of fundamental research interest
and vital for successful management. Changes may consist
either of short-term pulse disturbances of varying magnitudes
(e.g. weed cutting, ood events), or longer-term press
changes, such as shifts in land use or climatic changes
(Brunsden and Thornes, 1979). Depending upon the
particular river system and disturbance, eco-
hydromorphology could show no change, temporary
displacement followed by a return to pre-disturbance
conditions, progressive adjustment to the new levels of the
drivers or a rapid shift to a dierent set of conditions/stability
domain (Brunsden and Thornes, 1979). Understanding the
ecological responses to such disturbances should enable
practitioners to appraise alternative policies based on their
likely impacts on the river system and to set upper limits to
potentially damaging activities (Groman et al., 2006). An
example of the latter are the attempts to nd an acceptable
level of urban development within a catchment before changes
in ecology are observed (Allan, 2004).
The component disciplines of eco-hydromorphology have
made valuable progress in studying river responses to
environmental change. Eco-hydromorphic responses to high
ow events and ooding provide a case in point. Numerous
studies document how channel forms have changed following
ooding, and then shift to a dierent state or recover their
original form (e.g. Schumm and Lichty, 1963; Myers and
Swanson, 1996; Sloan et al., 2001). Similar documentation of
ood eects has been carried out on river ecology (e.g. Power
and Stewart, 1987; Boulton et al., 1992), as well as
experimental disturbances intended to mimic ooding (e.g.
Melo et al., 2003). Ecological or hydromorphological
responses to ooding (rapid recovery or shift to a dierent
form) have been conceptualized over recent decades, invoking
ideas including stability, sensitivity, resistance, resilience,
stability domains separated by thresholds, nonlinear
dynamics and complexity theory (Leopold and Wolman,
1957; Holling, 1973; Schumm, 1979; Phillips, 1992; Downs
and Gregory, 1995; Gunderson, 2000; Stallins, 2006). By
combining empirical observations and conceptual models, the
mechanisms underlying these behaviours are being elucidated,
such as the roles of feedback mechanisms and thresholds in
maintaining or switching between alternative system states
(Dent et al., 2002).
Developments in ecology, hydrology and geomorphology
are tempered by the limited development at their interface.
While much of the work on environmental change focuses on
hydromorphic and ecological interactions, it often suers from
the common problem of expertise concentrated in a single
discipline (Hannah et al., 2004). The conceptual frameworks
for studying the responses to change have developed in
isolation, such that analogous physical and ecological
concepts are given dierent terms and classied in dierent
ways. For example, while thresholds and process (or stability)
domains are dened and used in similar ways, the concept of
landscape sensitivity encompasses the ecological notions of
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resistance and resilience in a more holistic concept (Brunsden
and Thornes, 1979; Gunderson, 2000). One conclusion is that
there is a clear need to unite dierent disciplines in the course
of studying environmental change, to share a common
language and concepts (Benda et al., 2002). In terms of
specic research and management aims, there is a need to
identify: (i) the responses of dierent elements of eco-
hydromorphology to dierent forms of environmental
change (e.g. brief perturbations or prolonged changes); (ii)
the nature of any thresholds in the external drivers (e.g.
climate) of river systems beyond which major changes occur;
(iii) the proximate drivers and more gradual changes that
reduce resistance/resilience (or increase the sensitivity) to
environmental changes (e.g. reductions in water quality
reducing the ecological resilience to hydromorphic
disturbance); (iv) the trajectories of eco-hydromorphic
changes, both in response to perturbations and in recovering
to the previous state; and (v) indicators of when eco-
hydromorphology is in the vicinity of a threshold, to trigger
management interventions (Groman et al., 2006).
Covariance between eco-hydromorphic elements
Many elements of the riverine environment covary. Urban land
adjoining a channel, for example, may be associated with
modied water quality, altered ow regime, structural changes
to the channel (e.g. channelization, bank reinforcement) and
disruption of processes such as sediment supply (Paul and
Meyer, 2001). Concomitant ecological changes in such
situations (e.g. reduced taxonomic diversity or increased
decomposition rates; Paul and Meyer, 2001) could be a
response to any or all of the changes associated with the land
use. Their eects could be additive, subtractive or synergistic.
Covariance between elements of river systems is both a
challenge and a benet. The challenge occurs in establishing
causal relationships among correlated variables. In the case of
urban development, this may include separating the roles of
hydromorphic modications from reduced water quality.
Where feasible, experimentation could break some of the
correlations and identify key factors, such as the distinct
inuences of substratum and ow velocity on macrophytes }
two variables that are normally correlated (Chambers et al.,
1991). However, experimentation creates articial conditions,
potentially limiting generalizations unless all of the important
factors are addressed.
The potential benet of covariance stems from the oppor-
tunities to describe general eco-hydromorphic relationships.
To pursue the urbanization example, if consistent relationships
between water quality and hydromorphic variables could be
characterized, it might be feasible to combine them in general
ecologyurbanization relationships (Paul and Meyer, 2001).
In this way, the observed covariance may simplify eco-
hydromorphic study. A sound principle underlies this idea,
because, assuming that correlations have been correctly
identied, the covariance between eco-hydromorphic
components is indicative of some common causal process(es)
} albeit unresolved and potentially far removed from theobserved variables (Shipley, 2000). Studying the covariances
between eco-hydromorphic components could assist in the
generation of causal hypotheses.
Two implications of multicollinearity for data analysis are
noteworthy. The rst is that many studies will benet from
being placed in a broader context, identifying a wider set of
covarying eco-hydromorphic elements to avoid drawing
premature conclusions about the relevant variables. Second,
careful choice of methods is crucial. Factor analysis or
ordination methods can help to describe collinearity and
identify underlying structures/variables that have common
causes (Vaughan and Ormerod, 2005). Path analysis and
structural equation modelling may provide a more relevant
framework for dealing with inter-correlated variables (Pugesek
et al., 2003). Statistical variable selection methods (e.g. stepwise
regression) should be avoided, as they are unreliable in the
presence of collinearity and present the temptation to make
inferences about the main variables based upon statistical
signicance (Graham, 2003).
Development of tools and methods
The need to develop novel or more rened tools and methods
reects (i) the complexity and uncertainty surrounding river
research and management, (ii) the diverse audience} in termsof opinions, interests and technical understanding } that
needs to be engaged, and (iii) attempts to link ecology and
hydromorphology more directly, rather than simply
correlating patterns. Numerous issues could be suggested:
here, this is restricted to three examples.
Linking ecological and hydromorphic processes inresearch
Identifying and redressing technical limitations is a clear
priority to facilitate stronger coupling of physical and
ecological processes. At present there is often a mismatch in
the capacity to capture the ecological features and the physical
environment at the empirical level, and this may limit progress
in some aspects of research. For example, laser scanning can
rapidly quantify channel morphology over several biotopes
(hundreds of square metres) at high resolutions (potentially
sub-centimetre), and using repeat imaging, quantify sediment
transport (McCarey et al., 2005). Matching biological
sampling to such data presents problems, both in terms of
obtaining thorough coverage of such large areas and capturing
how organisms such as benthic invertebrates interact with
physical habitat at such high resolution (Peckarsky, 1991).
Developing the temporal dimension of eco-hydromorphic
measurement is vital if the links between processes are to be
made more directly than using simple space-for-time
correlations between patterns. Signicant technological
advances have been made, such as the potential applications
of passive integrated transponder (PIT) tagging to monitor
organism or sediment particle movements at higher temporal
resolutions than previously (Lucas and Baras, 2000; Lamarre
et al., 2005).
Nevertheless, fundamental limits remain on the ability to
measure eco-hydromorphic patterns and processes in both
space and time. For example, in a rapidly changing ow
regime with concurrent change in bed morphology, it is at
present impossible to quantify spatial patterns at meso-habitat
scales (ca 0.5m resolution), let alone microhabitat (Cliord
et al., 2005). In lieu of such abilities, modelling presents a way
forward. Physically based numerical modelling frameworks are
capable of accurately representing ow structures in 13
dimensions and over time (Parsons et al., 2004). Sear et al. (in
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press) advocate the use of coupled ecologicalgeomorphic
models within an experimental design to explore the
relationships between hydromorphic processes and the
resulting habitats. Agent-based models provide a versatile basis
on which to relate the behaviour of organisms or ecological
processes to physical habitat structure or processes (Booker
et al., 2004; Rashleigh and Grossman, 2005). Many modelling
frameworks are adept at handling nonlinear systems. Using
observations of ecological patterns and physical forms to
calibrate process rates and system behaviour in models,
followed by further observation to test the models, provides a
powerful way of reconciling the desire to study processes with
the relative ease of recording patterns.
Addressing uncertainty
The importance of uncertainty in research and management
has long been recognized, yet rarely addressed adequately.
Uncertainty derives from a range of sources, including
measurement errors, the weak science-base for much of eco-
hydromorphology, conicting evidence about a phenomenon,
and issues } especially in the future } that can never be
known (Van Asselt and Rotmans, 2002). It is vital that
uncertainty be addressed explicitly in many situations, to avoid
over-estimating condence in conclusions or predictions, or
setting unrealistic goals for management (Clark, 2002). River
restoration projects provide a good example, being inherently
complex and involving a high degree of uncertainty from a
range of sources } especially when projects are viewed over
geomorphologically relevant timescales (Sear et al., in press).
Explicitly acknowledging uncertainties provides a way of
managing unrealistic stakeholder and societal expectations
(Clark, 2002; Rogers, 2006).
Frameworks are required that consider uncertainty, along
with tools with which to describe or quantify it (Clark, 2002).
On one level, analyses that handle known uncertainties such as
measurement error can be adopted readily. Recent
developments using Bayesian statistics, information-gap
theory and other methods illustrate how this may be possible
in eco-hydromorphology (Regan et al., 2005; Halpern et al.,
2006). At a higher level, frameworks for placing management
within the context of all uncertainties} known and unknown
} are being developed (Johnson and Brown, 2001).
Decision making and communication tools
The need for decision making and communication tools is a
consequence of: (i) the diversity of stakeholders involved in
river management; (ii) acknowledging the complexity and
inherent uncertainty in managing river systems; and (iii) the
concomitant capacity for conicts of interest (Clark and
Richards, 2002). Potential conicts occur frequently, such as
the desire to increase water abstraction for drinking and
agriculture, compared with the desire to minimize human
impacts. This has driven the development of a range of
decision support and communication tools. For example, cost-
benet analyses are increasingly being performed, often in
terms of improvements in water quality (Eisen-Hecht and
Kramer, 2002; Mourato et al., 2005), but also relating to eco-
hydromorphology. Kuby et al. (2005) developed a modelling
method for dam removals in the Willamette River basin in
Oregon, which compared the potential benets for salmonid
migration against socio-economic losses (water storage and
hydropower) under dierent scenarios, and which suggested
signicant habitat connectivity benets for relatively low levels
of dam removal. Willis and Garrod (1999) considered the
balance between water abstraction and the potential losses of
recreational income associated with low ows, and showed
that recreational angling in particular could provide nancial
justication for many types of low ow alleviation.
Developments in decision-making need to be coupled to
initiatives aimed at making the tools, and the outputs from
them, readily accessible to the relevant parties and policy
makers. Arnold et al. (2000) described education programmes
for making GIS-based decision support systems for catchment
land-use more accessible to local planners. Ultimately,
decision-making partnerships are required that involve all of
the stakeholders } scientists, managers, land owners and
wider society (Rogers, 2006) } in the same way as researchrequires an inter-disciplinary approach.
THE DEVELOPMENT OF ECO-HYDROMORPHOLOGY
Eco-hydromorphology is in its infancy, despite decades of
relevant research, and it is valuable to consider the framework
within which it could develop (Figure 1). Except for specic
eco-hydromorphic interactions that have been well studied,
much of the research eld still appears to be concerned with
identifying gaps in understanding and framing key research
questions, with expert opinion and some initial literature
reviewing helping to clarify the gaps (Figure 1). In the
preceding discussion some general research gaps have been
highlighted, and in the conclusions some key research aims and
questions are suggested.
Three approaches could be employed to address the research
questions: formal literature reviewing, use of existing data
resources, and dedicated data collection and experimentation
(Figure 1). With research spread across at least three separate
disciplines and many decades, reviews of the riverine eco-
hydromorphic literature are extremely important to synthesize
current understanding and to introduce ideas from the
individual disciplines across eco-hydromorphology. The
opportunities for data mining and other post hoc analyses are
considerable, given the extensive data resources }
ecological, hydrological and geomorphological } that havebeen collected over many years. The overlaps between such data
sets in space and time provide a basis for valuable eco-
hydromorphic investigations, along the lines of the rebeccaproject (relationships between ecological and chemical status of
surface waters), which uses existing data from across Europe,
mainly to examine the linkages between water quality and
benthic macroinvertebrates. Dedicated research programmes
are likely to be the only way of addressing many of the research
questions, but should be supported by literature reviewing and
opportunistic data analyses wherever possible.
Evidence appraisal is vital (Figure 1). The three basic
research methods can be arranged around a simple hierarchy
(Figure 2), representing a ladder of evidence in terms of the
depth of understanding and strength of the evidence.
Literature reviews and analyses of existing data can be
assigned to broad sections of the ladder, the precise positions
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depending upon the rigour of both the methods used and those
of the contributing studies or data resources (Figure 2).
Literature reviews are potentially far more valuable than any
individual study owing to the accumulated mass of evidence,
especially if comparable studies are performed under non-
identical conditions, helping to reveal how general the ndings
are over space and time (Lindsay and Ehrenberg, 1993).
These should result in a critically appraised body of eco-
hydromorphic research, which could, in turn, feed into both
pure and applied outputs (Figure 1). Eco-hydromorphology
could contribute to basic science in a wide range of areas, both
in terms of general theory (e.g. diversity and ecosystem
functioning, ecologyphysical habitat interactions) and in the
ways that rivers dier from terrestrial and marine systems
(FBA, 2005). In applied areas, eco-hydromorphic research
should help to generate an evidence base for river management
(Sutherland et al., 2004) and underpin management tools (e.g.
decision support frameworks or bioassessments of
hydromorphological pressures). From all of these outputs,
and indeed from preceding stages in the framework, feedback is
anticipated to the early stages, representing further renement
of the knowledge gaps and key questions (Figure 1).
CONCLUSIONS: PRIORITIES FOR THEDEVELOPMENT OF ECO-HYDROMORPHOLOGY
Research
Numerous research gaps can be identied, and several that are
considered priority areas for eco-hydromorphology have been
discussed. Some of the most valuable short-term work could
focus on making the best use of existing resources} literatureor data. Multi-disciplinary reviews would not only help to
clarify the extent of eco-hydromorphic science, but could also
stimulate development of the area through the combination of
initiatives from the dierent disciplines. Opportunistic data
analyses and data mining will generally be limited to static,
correlative research, yet this should help to provide initial
answers to questions and provide quantitative hypotheses to
guide more detailed research. Another early priority is to
identify model systems or organisms that could act as research
foci, as many research questions will require time series data,
creating a minimum start-up period before they can be
addressed.
In the longer-term, numerous research lines requiring new
data collection can be identied. In this paper, pattern-
processes linkages, spatial structuring, scaling relationships,
system dynamics and responses to environmental change have
been considered, and a few of the many research possibilities
within them suggested } many others could be proposed.Over-arching priorities are to: (i) aim for mechanistic
understanding wherever possible (cf. simple, correlative
investigations); and (ii) try to approach research areas from
multiple disciplines, to draw expertise from dierent areas and
avoid unnecessary duplication of research eort resulting from
a lack of communication between elds. Given current
emphasis on climate change, abstraction and river
regulation, research into eco-hydromorphic resistance/
resilience and responses to environmental change are likely
to be particular priorities.
Monitoring and methods
Numerous issues can be identied relating to the methods and
tools required for research and management (Table 1). In the
short term, most of the aims identied focus on the appraisal
of current methods and ways in which they could be improved
(Table 1). In the longer term, the focus moves to the
development of specic eco-hydromorphic methods, rather
than the adaptation of methods developed for more specialized
purposes.
Carefully designed river monitoring programmes are
extremely important and have much wider value than their
monitoring role. The opportunistic analysis of existing data
sets can address a range of questions, yet is heavily dependent
upon the data that are available (Figure 2). Routine
monitoring programmes are potentially the most important
resource in this respect, with national coverage and temporal
time series; indeed, they may be the only such resource,
unequalled in their sample sizes and coverage. Unfortunately,
many monitoring programmes may have developed in a
piecemeal fashion and involve biases in eort or sampling
scheme (e.g. biases toward road networks). Appraising and
rening existing monitoring programmes, with a view to
optimizing their scientic rigour, would permit more valid
conclusions to be drawn for river monitoring and management,
as well as bringing widespread benets to eco-hydromorphology.
Management and practice
Suggested management priorities are a combination of
organizational and opportunistic measures, coupled with
Knowledge gap
Key questions Expertopinion
Informal literaturesearch
Literaturereviewing
Analysis ofexisting data
New datacollection
Science base Detailedpolicy
Legislation
Basic science Tools Practice &management
Evidence appraisal filter
Figure 1. A framework for the development of eco-hydromorphicresearch and management.
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No evidence-base
Exploratory data analysis, expertopinion.
HYPOTHESIS GENERATION
Stronger correlative methods e.g.independent testing,validation in
other rivers or with otherorganisms
Before-after comparisons
Dedicated, replicatedexperimental manipulations
Qualitativeliteraturereview
Systematicreview Strong, general evidence-base
Data mining
Experiments e.g.data collected
before and afterflood defence works
Literaturereviewing
New datacollection
Analysis ofexisting data
Figure 2. A ladder of evidence describing the relative strengths of literature reviewing, analyses of existing data and new data collection. Newinvestigations form the main body of the ladder, with stronger research methods and scientic inference encountered on higher rungs. Results frommost investigations can contribute to the overall evidence base (dotted lines). Literature and data-based research are plotted on the same scale, such
Table 1. Some monitoring and methodological priorities in riverine eco-hydromorphology
Short term* Review current ecological and hydromorphological monitoring programmes:
what potential is there to add (i) hydromorphological measurements to water quality or ecological monitoring schemes, and (ii) ecologicalvariables to hydromorphological surveys (e.g. uvial audit)?
coverage, sample sizes and other concerns.* Appraisal of hydromorphological survey methods (e.g. River Habitat Survey, physical habitat components of the US EPAs rapidbioassessment protocol): how relevant are they to ecology? Do they capture underlying processes and spatial structure? do they operate at ecologically relevant scales? do dierent methods complement one another? e.g. eld surveys, remote sensing and ow gauging what elements are missing and could be added to increase the eco-hydromorphic relevance?
* Improved description of eco-hydromorphic variability, to help distinguish background variation from overall system changes.* Evaluate appropriate research methods in eco-hydromorphology: opportunities for experimentation, eld survey designs, data analysis toolsfor stronger inference (e.g. structural equation modelling)
* Strengths and weaknesses of dierent surveys and analysis methods, and guidance regarding when each should be used.
Longer term* Targeted environmental sampling to document ecologyphysical habitat relationships. e.g. along gradients of hydromorphological pressures* Comparison of eco-hydromorphological assessment tools and models in demonstration catchments* Long-term monitoring at both near-pristine and modied sites}quantify variability and compare between natural and modied systems* Developing specic eco-hydromorphological methods cf. modifying existing ecological or hydromorphological methods:
measures that address causal mechanisms and processes multi-scale analysis tools frameworks for up-scaling from small-scale experiments/monitoring to scales of management relevance
* Adopt more mechanistic/dynamic approaches to modelling and data analysis e.g. agent-based models to simulate ecological interactions withphysical habitat
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some specic research and development aims (Table 2). Much
of current management, developing environmental standards
for hydromorphology and trying to identify actions that might
threaten or enhance river ecological quality, relies upon expert
opinion, with relatively little underpinning science. In the more
medium term, there is a need for research and development
that will enhance the capability for detecting, diagnosing and
predicting hydromorphological eects on ecological status.
Across Europe, this understanding will be vital into the next
WFD cycle (i.e. from 2015 onwards). The hope is that with
the development of eco-hydromorphology, management will
evolve into an increasingly evidence-based, science-led process.
Final point: capacity development
Eco-hydromorphological expertise is widely scattered across
the three main contributory disciplines (ecology, hydrology
and geomorphology) and beyond (e.g. civil engineering,
chemistry, social science). In some areas there has been a
dramatic loss of research capacity, such as among freshwater
ecologists in the UK (FBA, 2005; Raven, 2006). In other areas,
policy or regulatory requirements have tended to focus on
site-specic management (e.g. engineering or hydraulic works),
rather than considering the wider catchment. A change
in emphasis, through such initiatives as Making Space for
Water (in the UK) and the WFD, requires the skills of
geomorphologists, sedimentologists, hydrologists and allied
elds working at catchment scales to deliver eective riverine
planning and management (European Commission, 2000;
Defra, 2004). The dispersed nature of this wider eco-
hydromorphic community } both research and management} has the potential to restrict both its research anddevelopment capacity, and its ability to inuence policy.
A major priority in developing eco-hydromorphology, and
river research and management more generally, is to reverse
the declines and overcome the fragmented distribution of
expertise. A thriving community needs to be built and
sustained, linking the expertise that is available across
disciplines and institutions (including universities, research
institutes, regulatory bodies and conservation organizations).
Regular conferences and workshops, with broad invitations,
are one way to achieve this. Web-based initiatives could also
prove to be an eective way of building and maintaining links
across subject and geographical boundaries (Foote, 1999).
There is a strong case for promoting large-scale projects to act
as foci for collaborative eorts, to attract nancial support and
to raise the prole of eco-hydromorphology. The studies based
in the Hubbard Brook Forest, USA (Bormann and Likens,
1979) and at Llyn Brianne in upland Wales (Edwards et al.,
1990; Durance and Ormerod, 2007) provide illustrations of
how eective and enduring demonstration catchments can be.
The addition of urban catchments for this purpose would not
only improve understanding of urbanization eects, but also
make it easier for the value of the research to be appreciated by
the wider public. Focusing resources on such catchments is a
long-term commitment, but this brings the benets of
understanding processes and change over a range of timescales.
Finally, it is vital to recognize the international nature of the
eco-hydromorphological community. In Europe, the WFD
provides an obvious focus for international collaborations, as
member states need to address similar challenges. Other
European developments, such as the EU Water Initiative,
could also play a role. Globally, similar questions are being
asked and challenges faced. This is evident from a series of
United Nations initiatives, including the International
Hydrological Programme, the World Water Assessment
Programme and Millennium Development Goals. All of
these involve consideration of sustainable use of water
resources: eco-hydromorphology is a key aspect in achieving
this. The extent of global interest reveals both the
opportunities for international collaboration, and the degree
to which such collaboration could benet research at the
ecologyhydrologygeomorphology interface.
ACKNOWLEDGEMENTS
This paper resulted from a workshop (Linking PhysicalHabitat Structure to Riverine Biodiversity) held as part of theUK Population Biology Network (UK PopNet), funded by theNatural Environment Research Council (Agreement R8-H12-01) and English Nature. Further funding was provided by the
Table 2. Some priorities for management and practice in eco-hydromorphology
Short term* Dening the role for ecohydromorphology in dierent areas of catchment management* Collate best available evidence for ecologyhydromorphology relationships } mainly literature on correlative ecologyhydromorphologyrelations
* Establish a widely accessible repository for best practice and guidance for assessing habitat status, managing hydromorphological pressures(e.g. ood defence works), and restoration and conservation schemes
* Devise forums for involving the full range of stakeholders and wider society in decision making* Develop standard monitoring protocols for interventions (e.g. weir installation, river restoration) to ensure that as much information aspossible can be derived about the eects on ecology and hydromorphology
* Develop tools for handling uncertainty (e.g. decision support tools) and ways of setting management priorities (e.g. identifying important reachesfor the functioning of hydromorphic processes or those readily improved according to socio-economic criteria)
Longer term* Causal understanding of ecologyhydromorphology relationships (cf. simple speciesenvironment correlations):
natural eco-hydromorphic relationships responses to point hydromorphological modications (e.g. weirs, local engineering works) responses to diuse or distal hydromorphological modications (e.g. land use, sediment loading, climate change)
* Appraise conservation interventions and river restoration using long-term monitoring* Research the concepts of resilience and thresholds as they apply to ecology, hydromorphology and their interactions, e.g. extent of urbandevelopment or impaired connectivity (longitudinal, channeloodplain or channelhyporheic zone)
* Integrate socio-economic concerns, e.g. cost-benet analyses* Understanding the eects of combined stressors (e.g. morphological, chemical and climatic) on river ecology
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Environment Agency. We wish to thank all of the workshopparticipants for valuable discussion and ideas, as well asProfessor Philip Boon and two anonymous referees, all ofwhose comments enabled us to make valuable improvementsto the manuscript.
REFERENCES
Allan JD. 1995. Stream Ecology: Structure and Function ofRunning Waters. Chapman & Hall: London.
Allan JD. 2004. Landscapes and riverscapes: the inuence ofland use on stream ecosystems. Annual Review of Ecologyand Systematics 35: 257284.
Arnold CL, Civco DL, Prisloe MP, Hurd JD, Stocker JW. 2000.Remote-sensing-enhanced outreach education as a decisionsupport system for local land-use ocials. PhotogrammetricEngineering and Remote Sensing 66: 12511260.
Bardonnet A, Baglinere JL. 2000. Freshwater habitat ofAtlantic salmon. Canadian Journal of Fisheries and AquaticSciences 57: 497506.
Battin TJ, Kaplan LA, Newbold JD, Hansen CME. 2003.Contributions of microbial biolms to ecosystem processesin stream mesocosms. Nature 426: 439441.
Benda LE, Po NL, Tague C, Palmer MA, Pizzuto J, Cooper S,Stanley E, Moglen G. 2002. How to avoid train wrecks whenusing science in environmental problem solving. Bioscience52: 11271136.
Birks HH, Birks HJB, Kaland PE, Moe D (eds). 1988. TheCultural Landscape: Past, Present and Future. CambridgeUniversity Press: Cambridge.
Booker DJ, Dunbar MJ, Ibbotson A. 2004. Predicting juvenilesalmon drift-feeding habitat quality using a three-dimensional hydraulic-bioenergetic model. EcologicalModelling 177: 157177.
Bormann FH, Likens G. 1979. Pattern and Process in aForested Ecosystem. Springer-Verlag: New York.
Boulton AJ, Peterson CG, Grimm NB, Fisher SG. 1992.Stability of an aquatic macroinvertebrate community ina multiyear hydrologic disturbance regime. Ecology 73:21922207.
Bradley DC, Ormerod SJ. 2002. Long-term eects ofcatchment liming on invertebrates in upland streams.Freshwater Biology 47: 161171.
Brierley G, Fryirs K, Jain V. 2006. Landscape connectivity:the geographic basis of geomorphic applications. Area 38:165174.
Brown AG. 2002. Learning from the past: palaeohydrologyand palaeoecology. Freshwater Biology 47: 817829.
Brunsden D, Thornes JB. 1979. Landscape sensitivity andchange. Transactions of the Institute of British Geographers 4:463484.
Carter SP. 1989. The Waterways Bird Survey of the BritishTrust for Ornithology: an overview. Regulated Rivers:Research and Management 4: 191197.
Chambers PA, Prepas EE, Hamilton HR, Bothwell ML. 1991.Current velocity and its eect on aquatic macrophytes inowing waters. Ecological Applications 1: 249257.
Clark MJ. 2002. Dealing with uncertainty: adaptive approachesto sustainable river management. Aquatic Conservation:Marine and Freshwater Ecosystems 12: 347363.
Clark MJ, Richards KJ. 2002. Supporting complex decisionsfor sustainable river management in England and Wales.Aquatic Conservation:Marine and Freshwater Ecosystems 12:471483.
Clarke SJ, Bruce-Burgess L, Wharton G. 2003. Linking formand function: towards an eco-hydromorphic approach to
sustainable river restoration. Aquatic Conservation: Marineand Freshwater Ecosystems 13: 439450.
Cliord NJ, Soar PJ, Harmar OP, Gurnell AM, Petts GE,Emery JC. 2005. Assessment of hydrodynamic simulationresults for eco-hydrological and eco-hydraulic applications:a spatial semivariance approach. Hydrological Processes 19:36313648.
Cooper DJ, Andersen DC, Chimner RA. 2003. Multiplepathways for woody plant establishment on oodplains atlocal to regional scales. Journal of Ecology 91: 182196.
Davies NM, Norris RH, Thoms MC. 2000. Prediction andassessment of local stream habitat features using large scalecatchment characteristics. Freshwater Biology 45: 343369.
Defra. 2004. Making Space for Water: Developing a NewGovernment Strategy for Flood and Coastal Erosion RiskManagement in England. Department for the Environment,Food and Rural Aairs: London.
Dent CL, Cumming GS, Carpenter SR. 2002. Multiple statesin river and lake ecosystems. Philosophical Transactions ofthe Royal Society, Series B 357: 635645.
Downs PW, Gregory KJ. 1995. Approaches to river channelsensitivity. The Professional Geographer 47: 168175.
Durance I, Lepichon C, Ormerod SJ. 2006. Recognizing theimportance of scale in the ecology and management ofriverine sh. River Research and Applications 22: 11431152.
Durance I, Ormerod SJ. 2007. Climate change eects onupland stream macroinvertebrates over a 25-year period.Global Change Biology 13: 942957.
Edwards RW. 1968. Some eects of plants and animals on theconditions in fresh-water streams with particular reference totheir oxygen balance. In Proceedings of the InternationalConference on Water Pollution Research. Pergamon: Oxford;319333.
Edwards RW, Gee AS, Stoner JH (eds). 1990. Acid Waters inWales. Kluwer: Dordrecht.
Ehlers M, Geehler M, Janowsky R. 2006. Automated techniquesfor environmental monitoring and change analyses for ultrahigh resolution remote sensing data. PhotogrammetricEngineering and Remote Sensing 72: 835844.
Eisen-Hecht JI, Kramer RA. 2002. A cost-benet analysis ofwater quality protection in the Catawba basin. Journal of theAmerican Water Resources Association 38: 453465.
European Commission. 2000. Directive 2000/60/EEC,Establishing a framework for community action in theeld of water policy. Ocial Journal of the EuropeanCommunities L327: 171, Brussels.
Eyre MD, Lu ML, Lott DA. 2002. The importance ofexposed riverine sediments for phytophagous beetles(Coleoptera) in Scotland and northern England. AquaticConservation: Marine and Freshwater Ecosystems 12:553566.
Fagan WF. 2002. Connectivity, fragmentation, and extinctionrisk in dendritic metapopulations. Ecology 83: 32433249.
FBA. 2005. A Review of Freshwater Ecology in the UK.Freshwater Biological Association: Ambleside.
Foote KE. 1999. Building disciplinary collaborations on theWorld Wide Web: strategies and barriers. Journal ofGeography 98: 108117.
Frissell CA, Liss WJ, Warren CE, Hurley MD. 1986. Ahierarchical framework for stream habitat classication:viewing streams in a watershed context. EnvironmentalManagement 10: 199214.
Fuller IC, Passmore DG, Heritage GL, Large ARG, MilanDJ, Brewer PA. 2002. Annual sediment budgets in anunstable gravel-bed river: the River Coquet, northernEngland. In Sediment Flux to Basins: Causes, Controls andConsequences, Jones SJ, Frostick LE (eds). GeologicalSociety: London, Special Publications 191; 115131.
INTEGRATING ECOLOGY WITH HYDROMORPHOLOGY 123
Copyright # 2008 John Wiley & Sons, Ltd. Aquatic Conserv: Mar. Freshw. Ecosyst. 19: 113125 (2009)DOI: 10.1002/aqc
-
Gaston KJ, Blackburn TM. 1999. A critique formacroecology. OIKOS 84: 353368.
Gilvear DJ, Davids C, Tyler AN. 2004. The use of remotelysensed data to detect channel hydromorphology: RiverTummel, Scotland. River Research and Applications 20:795811.
Graham MH. 2003. Confronting multicollinearity inecological multiple regression. Ecology 84: 28092815.
Gran K, Paola C. 2001. Riparian vegetation controls onbraided stream channels. Water Resources Research 37:32753283.
Groman PM, Baron JS, Blett T, Gold AJ, Goodman I,Gunderson LH et al. 2006. Ecological thresholds: the key tosuccessful environmental management or an importantconcept with no practical application? Ecosystems 9: 113.
Gunderson LH. 2000. Ecological resilience } in theory andapplication. Annual Review of Ecology and Systematics 31:425439.
Gurnell AM, Hupp CR, Gregory SV. 2000. Linking hydrologyand ecology. Hydrological Processes 14: 28132815.
Gurnell AM, Petts GE. 2002. Island-dominated landscapes oflarge oodplain rivers, a European perspective. FreshwaterBiology 47: 581600.
Gurnell AM, Piegay H, Swanson FJ, Gregory SV. 2002.Large wood and uvial processes. Freshwater Biology 47:601619.
Gustafson EJ. 1998. Quantifying landscape spatial pattern:what is the state of the art? Ecosystems 1: 143156.
Halpern BS, Regan HM, Possingham HP, McCarthy MA.2006. Accounting for uncertainty in marine reserve design.Ecology Letters 9: 211.
Hannah DM, Wood PJ, Sadler JP. 2004. Ecohydrology andhydroecology: a new paradigm? Hydrological Processes 18:34393445.
Holling CS. 1973. Resilience and stability of ecologicalsystems. Annual Review of Ecology and Systematics 4: 123.
Hynes HBN. 1960. The Biology of Polluted Waters. LiverpoolUniversity Press: Liverpool.
Jackson RB, Carpenter SR, Dahm CN, McKnight DM,Naiman RJ, Postel SL, Running SW. 2001. Water in achanging world. Ecological Applications 11: 10271045.
Johnson PA, Brown ER. 2001. Incorporating uncertainty inthe design of stream channel modications. Journal of theAmerican Water Resources Association 37: 12251236.
Junk WJ, Bayley PB, Sparks RE. 1989. The ood-pulseconcept in river-oodplain systems. Canadian SpecialPublication in Fisheries and Aquatic Sciences 106: 110127.
Kay AL, Jones RG, Reynard NS. 2006. RCM rainfall for UKood frequency estimation. II. Climate change results.Journal of Hydrology 318: 163172.
Kruk A, Penczak T. 2003. Impoundment impact on facultativeriverine sh. International Journal of Limnology 39: 197210.
Kuby MJ, Fagan WF, ReVelle CS, Graf WL. 2005. Amultiobjective optimization model for dam removal: anexample trading o salmon passage with hydropower andwater storage in the Willamette basin. Advances in WaterResources 28: 845855.
Lamarre H, MacVicar B, Roy AG. 2005. Using passiveintegrated transponder (PIT) tags to investigate sedimenttransport in gravel-bed rivers. Journal of SedimentaryResearch 75: 736741.
Lane SN, Westaway RM, Hicks DM. 2003. Estimation oferosion and deposition volumes in a large, gravel-bed,braided river using synoptic remote sensing. Earth SurfaceProcesses and Landforms 28: 249271.
Langhans SD, Tockner K. 2006. The role of timing, duration,and frequency of inundation in controlling leaf litter
decomposition in a river-oodplain ecosystem(Tagliamento, northeastern Italy). Oecologia 147: 501509.
Leopold LB, Wolman MG. 1957. River channel patterns }braided, meandering and straight. US Geological SurveyProfessional Papers 282-B: 3985.
Lindsay RM, Ehrenberg ASC. 1993. The design of replicatedstudies. The American Statistician 47: 217228.
Lucas MC, Baras E. 2000. Methods for studying spatialbehaviour of freshwater shes in the natural environment.Fish and Fisheries 1: 283316.
McCarey KJW, Jones RR, Holdsworth RE, Wilson RW,Clegg P, Imber J et al. 2005. Unlocking the spatialdimension: digital technologies and the future ofgeoscience eldwork. Journal of the Geological Society,London 162: 927938.
Madsen TV, Enevoldsen HO, Jorgensen TB. 1993. Eects ofwater velocity on photosynthesis and dark respiration insubmerged stream macrophytes. Plant, Cell and Environment16: 317322.
Malmqvist B. 2002. Aquatic invertebrates in riverinelandscapes. Freshwater Biology 47: 679694.
Martinez PJ, Chart TE, Trammell MA, Wullschleger JG,Bergensen EP. 1994. Fish species composition beforeand after construction of a main stem reservoir on theWhite River, Colorado. Environmental Biology of Fishes 40:227239.
Melo AS, Niyogi DK, Matthaei CD, Townsend CR. 2003.Resistance, resilience, and patchiness of invertebrateassemblages in native tussock and pasture streams in NewZealand after hydrological disturbance. Canadian Journal ofFisheries and Aquatic Sciences 60: 731739.
Morita K, Yokota A. 2002. Population viability of stream-resident salmonids after habitat fragmentation: a case studywith white-spotted charr (Salvelinus leucomaenis) by anindividual based model. Ecological Modelling 155: 8594.
Mourato S, Atkinson G, Ozdemiroglu E, Newcombe J, deGaris Y. 2005. Does a cleaner Thames pass an economicappraisal? The value of reducing sewage overows in theRiver Thames. Water International 30: 174183.
Myers T, Swanson S. 1996. Stream morphologic impact of andrecovery from major ooding in north-central Nevada.Physical Geography 17: 431445.
Nakano S, Murakami M. 2001. Reciprocal subsidies: dynamicinterdependence between terrestrial and aquatic foodwebs. Proceedings of the National Academy of Sciences 98:166170.
Nijboer RC, Johnson RK, Verdonschot PFM, SommerhauserM, Buagni A. 2004. Establishing reference conditions forEuropean streams. Hydrobiologia 516: 91105.
Noke N. 2005. Geobiology } a holistic scientic discipline.Palaeogeography, Palaeoclimatology, Palaeoecology 219:13.
ONeill RV, Johnson AR, King AW. 1989. A hierarchicalframework for the analysis of scale. Landscape Ecology 3:193205.
ONeill RV, Krummel JR, Gardner RH, Sugihara G, Jackson B,DeAngelis DL, Milne BT, Turner MG, Zygmunt B,Christenson SW et al. 1988. Indices of landscape pattern.Landscape Ecology 1: 153162.
Parsons D, Ferguson RI, Lane SN, Hardy RJ. 2004. Flowstructures in meander bends with recirculation zones:implications for bend movements. In Riverow2004, GrecoM, Carravetta A, Della Morte R (eds). Balkema: London;4959.
Parsons M, Thoms MC, Norris RH. 2003. Scales ofmacroinvertebrate distribution in relation to thehierarchical organization of river systems. Journal of theNorth American Benthological Society 22: 105122.
I.P. VAUGHAN ET AL.124
Copyright # 2008 John Wiley & Sons, Ltd. Aquatic Conserv: Mar. Freshw. Ecosyst. 19: 113125 (2009)DOI: 10.1002/aqc
-
Paul MJ, Meyer JL. 2001. Streams in the urban landscape.Annual Review of Ecology and Systematics 32: 333365.
Peckarsky BL. 1991. Habitat selection by stream-dwellingpredatory stoneies. Canadian Journal of Fisheries andAquatic Sciences 48: 10691076.
Percival E, Whitehead H. 1929. A quantitative study of thefauna of some types of stream-bed. Journal of Ecology 17:282314.
Phillips JD. 1992. Nonlinear dynamical systems ingeomorphology: revolution or evolution? Geomorphology 5:219229.
Phillips JD. 2005. Entropy analysis of multiple scale causalityand qualitative causal shifts in spatial systems. TheProfessional Geographer 57: 8393.
Po NL, Allan JD, Bain MB, Karr JR, Prestegaard KL,Richter BD et al. 1997. The natural ow regime. Bioscience47: 769784.
Power MA, Stewart AJ. 1987. Disturbance and recovery of analgal assemblage following ooding in an Oklahoma stream.American Midland Naturalist 117: 333345.
Pugesek BH, Tomer A, von Eye A (eds). 2003. StructuralEquation Modeling: Applications in Ecological andEvolutionary Biology. Cambridge University Press:Cambridge.
Rashleigh B, Grossman GD. 2005. An individual-basedsimulation model for mottled sculpin (Cottus bairdi) in asouthern Appalachian stream. Ecological Modelling 187:247258.
Raven PJ. 2006. Freshwater ecological science in the UK: lastrites or a new dawn? Aquatic Conservation: Marine andFreshwater Ecosystems 16: 109113.
Reckendorfer W, Keckeis H, Winkler G, Schiemer F. 1999.Zooplankton abundance in the River Danube, Austria: thesignicance of inshore retention. Freshwater Biology 41:583591.
Regan HM, Ben-Haim Y, Langford B, Wilson WG, LundbergP, Andelman SJ, Burgman MA. 2005. Robust decision-making under severe uncertainty for conservationmanagement. Ecological Applications 15: 14711477.
Riley CFC. 1921. Distribution of the large water-strider Gerrisremigis throughout a river system. Ecology 2: 3236.
Rogers KH. 2006. The real river management challenge:integrating scientists, stakeholders and service agents. RiverResearch and Applications 22: 269280.
Schiemer F, Keckeis H, Reckendorfer W, Winkler G.2001. The inshore retention concept and its signicancefor large rivers. Archiv fur Hydrobiologie, Supplement 135:509516.
Schumm SA. 1979. Geomorphic thresholds: the concept andits applications. Transactions of the Institute of BritishGeographers 4: 485515.
Schumm SA, Lichty RW. 1963. Channel widening and oodplain construction along Cimarron River in south-westernKansas. US Geological Survey Professional Papers 352-D:7188.
Sear DA. 1994. River restoration and geomorphology. AquaticConservation:Marine and Freshwater Ecosystems 4: 169177.
Sear DA, Arnell NW. 2006. The application ofpalaeohydrology in river management. Catena 66: 169183.
Sear DA, Wheaton JM, Darby SE. In press. Uncertainrestoration of gravel bed rivers and the role ofgeomorphology. In Gravel Bed Rivers: Dynamics andRestoration, Habersack H, Hoey T, Piegay H, ErgenzingerP (eds). John Wiley: Chichester.
Sheer NA, Enzel Y, Benito G, Grodek T, Poart N, Lang M,Naulet R, Coeur D. 2003. Paleooods and historical oodsof the Ardeche River, France. Water Resources Research 39:article number 1376.
Shipley B. 2000. Cause and Correlation in Biology. CambridgeUniversity Press: Cambridge.
Sloan J, Miller JR, Lancaster N. 2001. Response and recoveryof the Eel River, California, and its tributaries to oods in1955, 1964, and 1997. Geomorphology 36: 129154.
Stallins JA. 2006. Geomorphology and ecology: unifyingthemes for complex systems in biogeomorphology.Geomorphology 77: 207216.
Sutherland WJ. 2006. Predicting the ecological consequencesof environmental change: a review of the methods. Journal ofApplied Ecology 43: 599616.
Sutherland WJ, Pullin AS, Dolman PM, Knight TM. 2004.The need for evidence-based conservation. Trends in Ecologyand Evolution 19: 305308.
Symstad AJ, Chapin FS, Wall DH, Gross KL, Huenneke LF,Mittelbach GG et al. 2003. Long-term and large-scaleperspectives on the relationship between biodiversity andecosystem functioning. Bioscience 53: 8998.
Thoms MC. 2006. Variability in riverine ecosystems. RiverResearch and Applications 22: 115121.
Tiegs SD, Pohl M. 2005. Planform channel dynamics of thelower Colorado river: 19762000. Geomorphology 69: 1427.
Tockner K, Malard F, Ward JV. 2000. An extension of theood pulse concept. Hydrological Processes 14: 28612883.
Tockner K, Ward JV, Arscott DB, Edwards PJ, Kollmann J,Gurnell AM, Petts GE, Maiolini B. 2003. The TagliamentoRiver: a model ecosystem of European importance. AquaticSciences 65: 239253.
Townsend CR, Hildrew AG. 1994. Species traits in relation toa habitat template for river systems. Freshwater Biology 31:265275.
Van Asselt MBA, Rotmans J. 2002. Uncertainty in integratedassessment modelling. Climatic Change 54: 75105.
Van der Nat D, Schmidt A, Tockner K, Edwards PJ, Ward JV.2002. Inundation dynamics in braided oodplains.Ecosystems 5: 636647.
Vaughan IP, Ormerod SJ. 2003. Improving the quality ofdistribution models for conservation by addressingshortcomings in the eld collection of training data.Conservation Biology 17: 16011611.
Vaughan IP, Ormerod SJ. 2005. Increasing the value ofprincipal components analysis for simplifying ecologicaldata: a case study with rivers and river birds. Journal ofApplied Ecology 42: 487497.
Viles HA (ed.). 1988. Biogeomorphology. Blackwell: Oxford.Ward JV, Wiens JA. 2001. Ecotones of riverine ecosystems:role and typology, spatio-temporal dynamics, and riverregulation. Ecohydrology and Hydrobiology 1: 2536.
Wassen MJ, Grootjans AP. 1996. Ecohydrology: aninterdisciplinary approach for wetland management andrestoration. Vegetatio 126: 14.
Wiens JA. 1989. Spatial scaling in ecology. Functional Ecology3: 385397.
Wiens JA. 2002. Riverine landscapes: taking landscape ecologyinto the water. Freshwater Biology 47: 501515.
Wiley MJ, Kohler SL, Seelbach PW. 1997. Reconcilinglandscape and local views of aquatic communities: lessonsfromMichigan trout streams. Freshwater Biology 37: 133148.
Willis KG, Garrod GD. 1999. Angling and recreation valuesof low-ow alleviation in rivers. Journal of EnvironmentalManagement 57: 7183.
Woord JEB, Gresswell RE, Banks MA. 2005. Inuenceof barriers to movement on within-watershed geneticvariation of coastal cutthroat trout. Ecological Applications15: 628637.
Woodward G, Hildrew AG. 2002. Food web structure inriverine landscapes. Freshwater Biology 47: 777798.
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Copyright # 2008 John Wiley & Sons, Ltd. Aquatic Conserv: Mar. Freshw. Ecosyst. 19: 113125 (2009)DOI: 10.1002/aqc