15 photosynthesis 2014-15

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    Photosynthesis1% sunlight is converted to chemical energy by plants

    Fixation of carbon dioxide and evolution of oxygen

    Overall reaction: 6CO2+ 6H2O 1 glucose + 6 O2

    granum

    Light reactions-Light-induced electron transfer-Thylakoid membrane-H2O + 3ADP + 2NADP

    +O2+ 3ATP + NADPH

    Dark reactions-CO2 fixation in the stroma-Biosynthetic reactions-Requires ATP and NADPH

    Two components in photosynthesis:

    Ch

    loroplast

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    Photosynthetic organisms

    Green sulfur bacteria

    Red tide red algae

    Diatoms

    Purple

    bacteriaCyano-

    bacteria

    Cyanobacteria

    Chlamydomonas

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    CHLOROPHYLLS

    Light-absorbing pigments in thylakoid membranesGreen pigments: chlorophylls a and bPolycyclic (5-ring system), planar

    Similar to hemoglobin

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    ACCESSORY PIGMENTS

    Absorption spectra of different pigments

    other pigments inthylakoid membranes

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    Excitation of electrons in pigment molecules

    (or other pigment molecules)

    a photon

    (= single quantum

    of light energy)

    Reaction

    center

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    Exciton transfer between neighboring pigment molecules

    Reaction center- Photosystem- Light-induced e-flow

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    Photosystems in light reactions

    - Protein complexes with pigments and electron carriers- Photosystems I and II

    (1) Purple bacteriaPS II only

    - Cyclic electron flow

    Q- quinone

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    (2) Green sulfur bacteria PSI only

    - H2S as electron donor in non-cyclic flow

    Fd: Ferredoxin (an iron-sulfur protein)

    FNR: Ferreodoxin reductase

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    (3) Cyanobacteria, algae, and plants Both PSI and PSII

    Purple bacteria (PSII)

    Green sulfur bacteria (PSI)

    Cyanobacteria(PS I + II)

    Chloroplasts(PS I + II)

    Evolution of chloroplasts?

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    Cyanobacteria, algae, and plants Both PSI and PSII

    OEC oxygen evolving complex

    PQ plastoquinone

    PC plastocyanin

    Fd ferredoxin

    FNR ferredoxin reductase

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    Photosynthetic electron transfer: Noncyclic vs cyclic pathways

    Noncyclic pathway: the Z scheme, unidirectional electron flow

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    Distribution of PSI, PSII, and ATPsynthase in thylakoid membranes

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    Photophosphorylation: light-driven ATP synthesis

    2H2O + 8 photons + 2NADP++ 3ADP + 3Pi O2+ 2NADPH + 2H++ 3ATP

    Non-cyclic photophosphorylation: Z scheme of etransfer involving both PSIand PSII

    plastoquinone

    ATP synthasecomplex

    photophosphorylation

    Thylakoid membrane sac

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    Cyclic Photophosphorylation

    (ferredoxin)

    Overall reaction:

    ADP + Pi ATP + H2O

    light

    Cyclic electron flow involving PSI onlySimilar to purple bacteriaNo production of NADPH and O2efrom ferredoxin move back throughthe cyt b6fcomplexProton pumping and phosphorylationRegulation of ATP to NADPH ratio

    -1.0

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    Lab 3: Hill reaction (Friday Nov 14)

    - Investigation of light-induced electron transfer in isolated spinach chloroplasts using a dye

    (DCPIP)

    - DCPIP (blue) accepts electrons from PQBand is reduced to DCPIPH2(colorless)

    - DCPIP replaces NADP+as the final electron acceptor

    - Requirements for Hill reaction: light, protein complexes (electron carriers)- DCMU: a herbicide blocking PQA to PQB electron flow

    - Ammonia: an uncoupler of ATP formation by elimination of proton gradient

    Ph h b h d h

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    Photosynthetic carbohydrate synthesis

    Photosynthesis might be thought of as the reverse of glycolysis and TCA cycle:

    6 CO2+ 6 H2O 1 glucose + 6 O2 (G' = +686 kcal/mol)

    Obviously this must be coupled to favorable reactions:18 ATP 18 ADP + 18 Pi12 NADPH 12 NAD+

    (i.e. reducing power)

    Assimilation of carbon dioxide into biomass in plants

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    Three stages of carbon dioxide assimilation: The Calvin cycle

    Stroma

    (Triose-P)

    Transketolase &transaldolase

    reactions

    1 C b d d f

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    Stage 1: Carbon dioxide fixation

    Ribulose-1,5-bisphosphate + CO2+ H2O 2 3-phosphoglycerate + 2 H+

    C3plants: fixation of CO2into 3-C compoundsEnzyme: ribulose bisphosphate carboxylase/oxygenase (rubisco)

    Rubisco: found in stroma, most abundant protein (50% of chloroplast soluble proteins)

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    Stage 2: Formation of glyceraldehyde-3-P

    Two gluconeogenesis reactions in stroma:

    St 3 R ti f ib l 1 5 bi h h t

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    Stage 3: Regeneration of ribulose 1,5-bisphosphate

    Overall: 5 triose-P 3 pentose-P

    *

    Carbohydrate

    synthesis

    *

    *

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    Stages

    1 and 2

    Stage 3

    Outline of different stages in Calvin cycle

    Stage 3:

    aldolase

    transketolase

    aldolase

    transketolase

    Ribulose 1,5-

    bisphosphateRibulose 1,5-

    bisphosphate

    Glyceraldehyde 3-

    phosphate

    Carbohydrate synthesis

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    Net results of three turns of the Calvin cycle

    - Consumption of 9ATPs, 6NADPH- Release of 1 G3P for carbohydrate

    synthesis

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    Carbohydrate synthesis from Glyceraldehyde 3-Phosphate

    Two G3P out of 12 G3P from 6 turns of Calvin cycle are used to make a hexose:

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    Starch biosynthesis in chloroplast stroma

    Fructose 6-phosphate

    - Starch synthase: adds glucose units to existing starch chain (-1,4 linkage)- Glucose 1-P can be released by starch phosphorylase

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    Sucrose biosynthesis in cytosol

    anomericcarbons

    1

    2

    a non-reducing sugar

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    Maple syrup Amyloplasts in potato cells

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    Photorespiration

    Light-driven reactions with no carbon fixationOxygenaseactivity of Rubisco(ribulose bisphosphate carboxylase/oxygenase)Generation of 3-phosphoglycerate and 2-phosphoglycolate2-Phosphoglycolate: a metabolic wasteful product

    Calvin cycle

    2 x 3-Phosphoglycerate Calvin cycle

    CO2+ H2O

    2H+

    oxygenase

    carboxylase

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    Glycolate pathway- Salvages the carbons in 2-phosphoglycolate to form 3-phosphoglycolate- Energy consuming (requires ATP)- Releases CO2

    CO2

    ATP

    Glycolate pathway

    (multiple steps)

    2 glycolate + 2 Pi

    X 2

    CHO

    COO-

    ADP

    Why is the process also called photorespiration?

    Calvin cycle

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    Carbon assimilation in C4plants

    CO2fixation into a 4-C compound

    Tropical grasses/cereals (e.g. maize,sugarcane vs rice a C3 plant)

    Minimization of photorespiration

    More ATPs are required

    (PEP)

    (OAA)

    CO assimilation in CAM plants

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    CO2assimilation in CAM plants

    Succulent plants (e.g. cactus)

    Hot and dry habitat

    Temporal separation of CO2capture and Rubisco activities

    Fixation of CO2into OAA by PEPcarboxylase at night (stomata open)

    OAA is converted to malate bymalate dehydrogenase for storagein vacuoles

    CO2released from malate by

    malate enzyme during the day(stomata closed)

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    (PEP)(OAA)

    vacuole