9th annual ronald c. baird sea grant science symposium microbiology of shell disease – which...

40
9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University Dr. Andrei Chistoserdov – Univ. Louisiana Dr. Patrick Gillevet – George Mason Univ. Dr. Michael Tlusty – New England

Upload: hillary-little

Post on 12-Jan-2016

218 views

Category:

Documents


3 download

TRANSCRIPT

Page 1: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

9th Annual Ronald C. Baird Sea Grant Science Symposium

Microbiology of shell disease – which bacteria are responsible?

Dr. Gordon Taylor –Stony Brook University Dr. Andrei Chistoserdov – Univ. LouisianaDr. Patrick Gillevet – George Mason Univ.

Dr. Michael Tlusty – New England Aquarium

Page 2: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University
Page 3: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University
Page 4: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

What type of bacteria settle onto lobster shell?

What type of bacteria firstattack the lobster shell?

What type of bacteria are presentas the lesion worsens?

Why do only some lobsters get

shell disease?

Compare bacteria in HealthyVs lesioned shellUse established community to

understand “pioneers”

What drives this Initial infection

Page 5: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Stony Brook Univ. – G. Taylor, B. Allam, A. McElroy, co-PIs;

S. Bell, Sea Grant Scholar, and T. Barrett, undergrad

George Mason UniversityC Ajuzie, M Sikaroodi, N Meres,

P Gillevet

Virginia Institute of Marine Sciences Jeff Shields et al

Compare bacteria of healthyto lesioned shell

Page 6: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Three similar but different methods

Page 7: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Lots of bacteria on the shell

Page 8: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Areas within a lobster differ….

Page 9: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Healthy vs diseased: No distinct differences

Page 10: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Can identify bacteria

Page 11: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

A different analysis – same result

Page 12: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Changes in abundance

Peak 217bp (AluI digest) in lesion samples represented 4% of the total community profile and much less than 1% in healthy shell samples.

lesion samplegene fragment of pathogen or opportunistic species??

healthy shell sample

same fragment

Page 13: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Bacterial community activity(destructive enzyme rates)

1 2 3 4

0

50

100

150

200

250

300

Lesion SamplesAsymptomatic ShellAsymptomatic Lobster

0

200

400

600

800

1000

1200

1400

Mon

omer

rele

ase

rate

( m

ol m

m-2

h-1

) )

Peptidase

Lipase

Jun07 Aug07 Oct07 Jun08

0

100

200

300

0

2000

4000

6000

8000

Cellulase

Chitinase

Jun07 Aug07 Oct07 Jun08

lesionhealthy shell – diseased lobsterhealthy shell – healthy lobster

Page 14: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Bacteria of healthy vs lesioned shell• Genetic signatures of bacteria

on shell span multiple major taxonomic groups, potentially comprised of 100’s of species

Page 15: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

• Bacterial communities associated with healthy and diseased shells appear to have similar memberships based on “fingerprinting” technique (TRFLP)

Page 16: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

• Four “species” (restriction fragments) were clearly more abundant in disease lesions compared to healthy shell

Page 17: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Community “Fingerprinting” Results

• In Healthy Shells (n = 84 samples)

– 6 peaks more common indicating some members of the normal microflora are displaced from diseased lobster shells.

– Numerous potential taxonomic associations, but dominated by members of - and -proteobacteria rather than -proteobacteria as seen in lesions.

– No viable bacterial cultures under anaerobic culture conditions

Page 18: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Community “Fingerprinting” Results

• In Lesions (n = 33 samples)

– Dominant TRFLP peaks (15-25% of total area) potentially belong to members of common coastal bacterial groups:

• -proteobacteria and Firmicutes phyla as well as Rhodobacteraceae and Rhizobiales.

– One potential match to Clostridium species (AluI 217bp ) • suggests anoxic conditions in lesions (as in gangrene)

– Clostridium sp. was successfully cultured anaerobically

Page 19: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

What type of bacteria settle onto lobster shell?

What type of bacteria firstattack the lobster shell?

What type of bacteria are presentas the lesion worsens?

Why do only some lobsters get

shell disease?

Compare bacteria in Healthyvs lesioned shell

Bulk of microbiome the

same between healthy

and diseased lobsters.?

Page 20: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

A laboratory model of shell diseaseNew England Aquarium

M Tlusty, A Metzler

Univ Louisiana A Chistoserdov, R Quinn

Roger Williams UnivR Smolowitz

Page 21: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University
Page 22: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University
Page 23: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Kopriimonas byunsanensisAlphaproteo

spotlesion

A homaria

Page 24: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Lesion has >104 more bacteria than healthy surface

Page 25: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Can we intentionally create infections?

• Bacteria onto filters - attach to lobsters– Aquamarina ‘homaria’ (R / L side)– -proteobacter (R side)– Pseudoalteromonas gracilis (R side)

Page 26: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University
Page 27: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

What type of bacteria settle onto lobster shell?

What type of bacteria firstattack the lobster shell?

What type of bacteria are presentas the lesion worsens?

Why do only some lobsters get

shell disease?

Use established community to understand “pioneers”

Aquamarina ‘homaria’

Page 28: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Aquamarina ‘homaria’

•Based on 16S rRNA and phospholipid fatty acid composition is a species different from but closely related to A. muelleri.

•Not commonly found in the environment.

•Aquimarina muelleri is found in sediments, associated with algae and marine invertebrates. Apart from Arthropods, was detected only in a sea hatchery in Canada.

Page 29: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

“A homaria” in other arthropodsSpecies Lesions Healthy

Carapace

Lobster 17 20

Spider Crab 10 8

Green Crab 7 3

Jonah Crab 9 8

Horseshoe Crab

4 3

Page 30: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Environmental Sampling• Samples taken from three different trips

1. Buzzards Bay Massachusetts, 11 locations2. Around Block Island, Rhode Island, 3. West Connecticut line to east Narragansett bay, Rhode Island

MUD SAND

Water samples at:

10 ft20 ft30 ft40 ft50 ft60 ft70 ft80 ft90 ft100 ft

Ekman Grab Niskin bottle

Bottomsamples

Page 31: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Sand sample at 74 ft deep positive = 107/g

Water sample at 20 ft 5ìm fraction positive = 103/L

Mud sample at Harbour of refuge 26 ft deep (3 cm deep in core)

positive = 103/g

Sand sample at 37 ft deep positive = 102/g

Page 32: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Environmental Sampling Summary

• A. ‘homaria’ - detected on other invertebrates• A. ‘homaria’ - also detected on lobster bait

(skate and haddock)• A. ‘homaria’ is not a common marine bacterium• Appears to be present in more off shore sand

sediments• Unusual distribution in New England Aquarium

Page 33: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

What type of bacteria settle onto lobster shell?

What type of bacteria firstattack the lobster shell?

What type of bacteria are presentas the lesion worsens?

Why do only some lobsters get

shell disease?

What drives this Initial infection

Page 34: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Diet and shell disease

0123456789

10

0 62 75 87 100

% Herring in Diet

She

ll D

isea

se S

ever

ity I

ndex

3 year old lobsters

0

1

2

3

4

5

6

7

0 62 75 87 100

1 year old lobsters

% Herring in Diet

She

ll D

isea

se S

ever

ity I

ndex

Dead

Page 35: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Temperature and shell disease

0.00

20.00

40.00

60.00

80.00

100.00

120.00

140.00

10 degrees 15 degrees 20 degrees

Average # of Days in Molt cycle (molts 1 to 2)

Page 36: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Temperature and shell disease

Page 37: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Temperature and spots

spotlesion

Page 38: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Temperature and lesions

spotlesion

Page 39: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Damage and shell disease

Page 40: 9th Annual Ronald C. Baird Sea Grant Science Symposium Microbiology of shell disease – which bacteria are responsible? Dr. Gordon Taylor –Stony Brook University

Conclusions• Pioneer is A. ‘homaria’ - first bacteria through shell

– Influenced by temperature, molt cycle length, animal status

• Likely natural reservoir of A. ‘homaria’ is various arthropods (crabs)• Recently evolved to infect compromised lobsters in southern New

England (host susceptibity)• Overall bacterial community memberships in diseased and healthy

shells were not grossly different according to three different methods.– ESD appears to induce subtle changes in the relative abundance of

members of the normal microflora.