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A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor

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Page 1: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

A Better Start – Big Data Rick Audas Barry Milne

Liz Craig Barry Taylor

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Presented at: Big Health Data for Epidemiology: opportunities and challenges using the SNZ IDI and other sources of "big data" for epidemiological research in NZ. University of Otago, Wellington, 26 January 2016.
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Page 2: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

What is the Challenge?

The Better Start Challenge focuses on three critical areas of childhood development that have been linked to life course outcomes.

These are:

Obesity

Literacy

Mental Health

Page 3: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Big Data’s Contribution

Aim of the Better Start Big Data group is to provide support to each of the research streams.

There are significant synergies in centralising this function – particularly around the IDI

economies of scale and scope

developing data access processes and protocols

analytical techniques to extract maximum information from these incredibly rich data sources.

Page 4: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

What data will we use?

Numerous Data Sources (which we are still learning about):

Birth Record data

B4 School Checks

NMDS

Census/NZ-Dep socio-economic data

Page 5: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Birth Registrations

Record created at birth.

Includes birthweight and gestational age as well as parents age and ethnicity.

Other information collected for the registration to be explored (including number of siblings)

Page 6: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

B4 School Check

Checks conducted before children enter school.

Covers a range of key health and developmental indicators.

Critically for us, BMI is captured, as are indicators of milestones towards literacy and behavioural/self control issues.

Has been collected since 2009 and now there is 90%+ coverage.

Page 7: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

NMDS

Hospital records.

Mostly useful for health trajectories. Can estimate predictors and counts of admissions.

Limited access currently to primary care data

Potentially an important source – need to explore option of GP to GP access for specific projects.

Page 8: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Others

ACC – allows for the identification (and count) of injury claims.

School data (age 15+, we believe achievement, but also stand-downs, suspensions)

Surveys – the possibility of linked survey/admin data

Pharms – may help us identify the incidence and prevalence of some conditions

Lab claims data (?)

PRIMHD – Integrated MH data.

Page 9: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Obesity

Only two systematic measures of weight and height over the lifespan (birth and B4 School).

Would be nice if there was another at age ten and again at 18….

But there isn’t.

Broad theme will be to look at the long-term sequelae of EC obesity.

Map early child hood rates of obesity and changes at community level in obesity rates i.e. which communities are doing better or worse than expected?

Page 10: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Mental Health

First indicators at B4 School check.

Hopefully can pick up cases through PRIMHD, NMDS, and possibly Pharms and Lab data.

Will tend to under-report less serious cases which are very often undiagnosed and untreated.

Page 11: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Literacy

Again, milestone indicators at B4 School.

Will seek to understand implications of not achieving key literacy milestones.

Literacy data is spotty thereafter. Will examine school achievement data and will be interested in looking at the long term consequences (if any) for falling short of literacy milestones.

Page 12: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Big Data: Underused? Oversold?

Administrative and clinical databases for research purposes have been significantly under-utilized.

They represent an important information source that should underpin EBDM.

Can tell us a great deal about specific populations and allow us to drill down to explore regional and community level trends.

Page 13: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Oversold

But we can’t answer everything.

Can identify ‘who’; ‘when’; ‘what’ and ‘where’.

Weak on the ‘why’ and ‘how’ questions.

But should be the backbone of identifying at-risk populations or communities that are doing especially well or poorly

And looking at the long-term sequelae

Page 14: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Workplan

Assessment of outcomes from IDI integrated data sources.

Arriving at a consensus as to the what indicators will be used and commencing benchmarking.

Work on a predictive model of agreed indicators (most likely from B4 School)

Produce annual set of Challenge level indicators by community (and possibly map these) to identify hotspots and conduct trend analysis. And to monitor the progress of the Challenge.

Page 15: A Better Start – Big Data Challenge · A Better Start – Big Data Rick Audas Barry Milne Liz Craig Barry Taylor . Presented at: \rBig Health Data for Epidemiology: opportunities

Workplan (cont.)

Develop an evaluation framework for assessing the impact of interventions using the IDI – potentially using the ad hoc loader.

Develop a microsimulation model(s) to examine the life-course impact (benefit) of a bad (good) start.

Will focus on a wide range of health, economic and social indicators.