12-13 june 2017 uk wellcome genome campus translational ... · ju. 27/10/2016 12:47 156 kb 444 kb...
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Translational BioinformaticsWellcome Genome Campus
UK12-13 June 2017
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Bio-Entity Finder and Relation Extraction
Biomedical databasesText mining
http://ibi.imim.es/befree/
Source Genes Diseases Associations
Curated 8,948 13,074 130,821
Animal Models 2,300 1,943 6,455
Text mining 16,119 12,604 448,732
All 17,074 20,370 561,119
Source Variants Diseases Associations
Curated 66,903 6,388 83,582
Text mining 24,455 4,432 57,331
All 83,002 9,169 135,588
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Gene Number of diseases
DisGeNET score DSI Number of
PMIDsNumber of
SNPs
CFTR 308 1 0,948 0,422 1596TGFB1 902 0,433 1 0,314 17DCTN4 83 0,401 1 0,555 2SCNN1B 69 0,293 1 0,573 13SCNN1G 65 0,212 1 0,579 6SCNN1A 64 0,207 0,833 0,581 9TNFRSF1A 318 0,205 1 0,419 1
CLCA4 18 0,204 1 0,709 4STX1A 54 0,200 1 0,598 1
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