go annotation from different sources
Post on 22-Feb-2016
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GO Annotation from different sources
EXAMPLES: public databases (eg. NCBI, UniProtKB) genome browsers (eg. Ensembl) array vendors (eg. Affymetrix)
CONSIDERATIONS: What is the original source? When was it last updated? Are evidence codes displayed?
Secondary Sources of GO annotation
C. Obtaining GO annotations from Secondary Sources
AIM: Look at how different public resources and tools display GO.
GO annotation obtained for chick GAPDH (P00356) from different sources:
QuickGO (primary source) UniProtKB database NCBI Entrez Gene page Ensembl browser Affymetrix chick array g:profiler gene expression analysis tool
QuickGO
1.
2.
Comparison of Chicken GAPDH GO annotation obtained from different sources.
GO evidence codes not reported.
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