biodiversity. why is biodiversity important? genetic diversity:

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Biodiversity

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Page 1: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Biodiversity

Page 2: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Why is Biodiversity Important?

• Genetic diversity:

Page 3: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Why is Biodiversity Important?

• Species Diversity:

Page 4: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Why is Biodiversity Important?

• Ecosystem Diversity:

Page 5: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Diversity = Richness + Evenness• richness: count of # species

• evenness: relative abundance of speciesEcosystem A Ecosystem B

4 oak species 3 oak species

bl oak = 40 bl oak = 120

wh oak = 30 wh oak = 60

r oak = 20 r oak = 20

pin oak = 10 pin oak = 0

Page 6: Biodiversity. Why is Biodiversity Important? Genetic diversity:

A = B = alpha () diversity – within habitatC = beta () diversity – among habitatD = gamma () diversity – geographic scale

Three Scales of Diversity

Page 7: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Alpha & Gamma Species Diversity Indices

• Shannon-Wiener Index – most used

- sensitive to change in status of rare species

s

iii ppH

1

))(ln('

H’ = diversity of species (range 0-1+)

s = # of species

pi = proportion of total sample belonging to ith species

Page 8: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Alpha & Gamma Species Diversity Indices

• Shannon-Wiener Index

s

iii ppH

1

))(ln('

Page 9: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 10: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Alpha & Gamma Species Diversity Indices

• Simpson Index – sensitive to changes in most abundant species

s

iipD

1

2)(1

D = diversity of species (range 0-1)

s = # of species

pi = proportion of total sample belonging to ith species

Page 11: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Alpha & Gamma Species Diversity Indices

• Simpson Index

s

iipD

1

2)(1

Page 12: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 13: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Alpha & Gamma Species Diversity Indices

• Species Evenness

max'

'

H

HJ

H’max = maximum value of H’ = ln(s)

Page 14: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Beta Species Diversity Indices• Sorensen’s Coefficient of Community

Similarity – weights species in common

cba

aSS

2

2

Ss = coefficient of similarity

(range 0-1)

a = # species common to both samples

b = # species in sample 1

c = # species in sample 2

Page 15: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Beta Species Diversity Indices• Sorensen’s Coefficient of Community

Similarity

Dissimilarity = DS = b + c / 2a + b + c

Or 1.0 - Ss

Page 16: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Species Sample 1 Sample 2

1 1 1

2 1 0

3 1 1

4 0 0

5 1 1

6 0 0

7 0 0

8 1 0

9 1 1

10 0 0

11 1 1

12 0 0

Page 17: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Sorensen’s Coefficient• Sample 1

– Total occurrences = b = 7- # joint occurrences = a = 5

• Sample 2– Total occurrences = c = 5- # joint occurrences = a = 5

• Ss = 2 * 5 / 10 + 7 + 5 = 0.45 (45%)

• Ds = 1 – 0.45 = 0.55 (55%)

Page 18: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Species-of-the-Week

American woodcock (Scolopax minor)

Page 19: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 20: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 21: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Habitat

• Woods & thickets with moist soil, small openings near woody cover

• aspen, alder, willow cover types (early successional = seedling/sapling stage; <3 in dbh)

Page 22: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 23: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 24: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 25: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 26: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Food

• Diet = 50-90% earthworms

• Diurnal foraging in spring/summer

• Nocturnal foraging in winter

• Long bill used as probe (foot stomping)

Page 27: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Reproduction

Courtship behavior = males on breeding fields Mar-Apr -- polygynous

Clutch size = ~4 eggs

I.P. = 21 days; near full grown in 28 days

Behavior

- Migratory – winters in SE U.S.

- Nonvocal calls = wing position

Page 28: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Estimating Abundance of Wildlife

• Terms

- Population

- Relative vs. Absolute Abundance

- Parameter vs. Statistic

- Population Index- Accuracy

- Precision

- Bias

Page 29: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 30: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 31: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 32: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Estimating Abundance of Wildlife

• Complete Counts (Census)

- open habitat = visible wildlife

- concentration of activity

- small study area

Page 33: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Estimating Abundance of Wildlife

• Complete Counts (Census)

- Drives

* Biased (under- or overestimate)

- Territorial (Spot) Mapping

e.g., breeding birds

Page 34: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Territorial (Spot) Mapping

Limitations:- territorial species (grouse, songbirds)- sex ratio known or

assumed-nonterritorial males? (floaters)-ability to id species & map territories

Page 35: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Estimating Abundance of Wildlife

• Complete Counts (Census)

- Aerial Counts & Sensing

- must see animal to count it!

- Aerial Photos or IR Thermal Scans

- photos of migratory waterfowl

Page 36: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 37: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Estimating Abundance of Wildlife

• Complete Counts (Census)

- Aerial Counts & Sensing

• Aerial line-transect counts

- must see animal to count it!

• Aerial Photos or IR Thermal Scans

- photos of migratory waterfowl

- IR scans of wildlife (bowhunting study in MN – loss rate)

Page 38: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 39: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Estimating Abundance of Wildlife

• Complete Counts - Sample Plots

- Line transects (ground or aerial)

- e.g., flush count for grassland birds

- assumes 100% detection

Page 40: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Indices of Relative AbundanceIndices of Relative Abundance• …dependent on the

collection of samples that represent some relatively constant but unknown population size

– Traps, number of fecal pellets, vocalization frequency, pelt records, catch/unit effort, number of artifacts, questionnaires, cover, feeding capacity, roadside counts

Page 41: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Indices of Relative AbundanceIndices of Relative Abundance

Page 42: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Capture TechniquesCapture Techniques

Page 43: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Capture TechniquesCapture Techniques

Page 44: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 45: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Radio Telemetry

Page 46: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Female

Male

Spatial Organization

Page 47: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Scent Stations

Page 48: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 49: Biodiversity. Why is Biodiversity Important? Genetic diversity:

Remote Camera Systems

Page 50: Biodiversity. Why is Biodiversity Important? Genetic diversity:

DNA Fingerprinting

Page 51: Biodiversity. Why is Biodiversity Important? Genetic diversity:

GPS

Page 52: Biodiversity. Why is Biodiversity Important? Genetic diversity:
Page 53: Biodiversity. Why is Biodiversity Important? Genetic diversity: