computer for biological research
DESCRIPTION
For barcampbangkok for GeeksTRANSCRIPT
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Computer Application For Biological Research
Chakard Chalayut (molecularck)
Laboratory of Molecular Virology
Institute of Molecular Biology & Genetics
Mahidol University
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A little bit about myself.
Bachelor degree in Microbiology at Microbiology Department, Science Faculty, KMUTT
Now. Master degree in Molecular Biology & Genetics at Institute of Molecular Biology & Genetics, Mahidol University.
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Imagine ! how does the cell big?
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Data storage in cell
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DNA
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How does the data transfer ?
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So we need to know how the information go from DNA to protein.
Which region is the coding sequence?
What is the remain in the DNA?
How does the protein work?
ETC
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The important of Computer in Biology Research
Human Genome Project (HGP)
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What we got from HGP
Sequence of all genetic information.
Maps and Landmarks in Genome
Expressed Sequence
DNA markers
Variation of genome
Bioinformatic tools
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Next of HGP
Transcriptomics
Proteomics
Functional Genomics
Animal Model Study
Gene Therapy
Computational GenomicsComputational Genomics
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Computational Genomics
Is an interdisciplinary field that applies the techniques of computer science, applied mathematics, and statistics to address problems inspired by biology. Major fields in biology that use computational techniques.
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Computational GenomicsBioinformatics
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Computational GenomicsBioinformatics
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Computational GenomicsComputational Biomodeling
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the reverse transcriptase enzyme of the HIV-I virus with a molecular model of an inhibitor drug compound bound to
the enzyme's receptor pocket.
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Computational GenomicsMolecular Modelling
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PyMol
VMD
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Computational GenomicsSystems biology
new biological study field that focuses on the systematic study of complex interactions in biological systems
TranscriptomicsProteomicsInteractomics
Glycomics
MetabolomicsFluxomics
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Computational GenomicsProtein structure prediction and structural genomics
Protein Purification
Crystallization
X-ray Crystallography
Analyses
Protein Structure
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For Thailand
We have BIOTECH as a leader for Computational Genomics development.
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The problem for biology research from my experience.
No background knowledge of computer.
Don’t have the easy and free tools to use. (especially Thai tools)
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Most of the free biology computer tools are in UNIX but most biological scientist didn’t know what is UNIX until Master degree!!! (Someone in Doctor Degree)
Most of biology science student didn’t study UNIX or biology tool but the University let they study Pascal or Dos and we don’t know how this program involve in biology research.
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The science student in Thailand must learn some bioinformatics or computational biology for research the tools for biology research.
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Thank you for your attention.