importance of basic and translational€¦ · literature trends . 0 100 200 300 400 500 1860-1870...

35

Upload: others

Post on 03-Jun-2020

5 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960
Page 2: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Coby Schal <[email protected]>

Department of Entomology

W. M. Keck Center for Behavioral Biology

North Carolina State University

Importance of Basic and Translational

Approaches in Bed Bug Research

BB Summit, DC 2011

Page 3: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Presentation Outline

• Trends of scientific publishing on BB

• Research approaches

• 3 Examples of translational research

1.Chemical ecology: Pheromones, other

semiochemicals

2.Population genetics

3.Gene expression & transcriptomes

• Perspective: Fundamental & translational

research

Page 4: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Lite

ratu

re t

ren

ds

0 100 200 300 400 500

1860-1870

1871-1880

1881-1890

1891-1900

1901-1910

1911-1920

1921-1930

1931-1940

1941-1950

1951-1960

1961-1970

1971-1980

1981-1990

1991-2000

2001-2010

Bed bug papers, patents

all databases

N = 1,407

0 5000 10000 15000 20000 25000 30000

1860-1870

1871-1880

1881-1890

1891-1900

1901-1910

1911-1920

1921-1930

1931-1940

1941-1950

1951-1960

1961-1970

1971-1980

1981-1990

1991-2000

2001-2010

Mosquito papers, patents

all databases

N = 68,388

• “flat” productivity for

60 yrs – 1940 – 2000

• upsurge in information

in the last decade

• mosquito : BB = 50 :1

Page 5: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Lite

ratu

re t

ren

ds

0 1 2 3 4 5 6

BRITISH MEDICAL JOURNAL

CANADIAN JOURNAL OF ZOOLOGY-REVUE …

GIDROBIOLOGICHESKII ZHURNAL

JOURNAL OF MEDICAL ENTOMOLOGY

LANCET

MEDITSINSKAYA PARAZITOLOGIYA I PARAZITARNYE …

NEW SCIENTIST

MEDICAL AND VETERINARY ENTOMOLOGY

SOUTH AFRICAN JOURNAL OF SCIENCE

TRANSACTIONS OF THE ROYAL SOCIETY OF …

1981 – 1990

N = 31 of 136

0 5 10 15 20 25 30

AMERICAN JOURNAL OF TROPICAL MEDICINE AND …

JOURNAL OF ENVIRONMENTAL HEALTH

PARASITOLOGY RESEARCH

PROCEEDINGS OF THE NATIONAL ACADEMY OF …

AMERICAN ENTOMOLOGIST

MEDICAL AND VETERINARY ENTOMOLOGY

JOURNAL OF INSECT PHYSIOLOGY

JOURNAL OF ECONOMIC ENTOMOLOGY

MEDICAL ENTOMOLOGY AND ZOOLOGY

JOURNAL OF MEDICAL ENTOMOLOGY

2001 – 2010

N = 81 of 468

Bed bugs: all databases, top 10 journals

Page 6: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Government invests in

“hands-off”

Basic research

Basic research, inspired by

curiosity,…adds to

„pool of knowledge‟

Applied research

and development...

stem from basic

research spin-offs

Society benefits with

information and cool

technologies and

sometimes…information

for practitioners and

decision makers

Linear Model

• Applied research poorly funded

• Compartmentalization: Different

teams engaged in basic & applied

• Basic researcher may be off on

another project before application

Page 7: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

21st Century Approach: Integrating Research, Extension, Outreach and Teaching

Translational research

mission-oriented, multidisciplinary, incentivized

shorter time-frame to practical applications

Page 8: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

• Disease vectors, bite allergies, asthma

• Abiotic interactions: temp, humidity

• Biological control agents: viruses, fungi, bacteria

• New pesticides, modes of action, resistance

• Novel non-chemical targets: cuticle, midgut, ovaries

1. BB behavior, communication, aggregation

2. Population biology

3. Unique genes and interactions of gene products,

BB genome

• More topics later…… Dr. Kells

A (partial) ‘Laundry’ List of Needs

Page 9: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Example 1: Host finding, chemicalsHost seeking Host location Host

rejection/acceptance;

engorgement

Host cues

CO2

Host odors

Temperature

Page 10: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Sensory ecology associated with host-seeking behavior

Optimal host:• human• chicken• rat• rabbit

Optimal source:• dynamic headspace

collection• SPME

Behavioral assaysolfactometers

Chemical IDGC-EAD, HPLC, GC-MS,

prep-GC, NMR, synthesis

Heat:• Dose-response

Moisture:• Dose-response

CO2:• Dose-response

New chemicals:• Dose-response

GC-EADA

dd

itiv

e &

syn

ergi

stic

in

tera

ctio

ns

Bioassay-guided fractionation

• Host-attractants for traps

• Sex pheromones

• Aggregation pheromones

Detection

Monitoring

Dissemination of

biological control

agents

Attract-and-Kill

• Repellents

• Attractants for baits?

• Phagostimulants

• More…… Dr. FeldlauferAlvaro Romero: NSF Post-Doctoral Fellow

Page 11: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Blood Test material

15 min feeding period

37o C37o C

What’s in blood that bed bugs like?

Page 12: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Individual bugs weighed before and after feeding

Blood Test

material

Page 13: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

0

10

20

30

40

50

60

70

Blood Water

Weig

ht in

cre

ase (

%)

Adult males

n = 20

Blood contains phagostimulants

P < 0.05

Page 14: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Water + ATP = Blood!

0

20

40

60

80

100%

En

go

rge

d

a

Blood Water 10-8 10-7 10-6 10-5 10-4

ATP (M)

aba

b

aab

b

Page 15: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

• Blood contains phagostimulants

• ATP is a highly effective phagostimulant

• All life stages displayed similar gorging responses to ATP

• ATP is a more effective phagostimulant than other

adenosine nucleotides

ATP > ADP > AMP

• Other phagostimulants?

Richard Naylor

Alvaro Romero

Page 16: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Example 2: Population genetics

Where have bed bugs resurged from?

3 Major hypotheses:

Local “home grown” bed bug populations

1. Residential, urban reservoirs

2. Agricultural (e.g., poultry farms) reservoirs

Global “immigrant” bed bugs

3. Outside USA: travel, globalization

Page 17: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

A single, or few, invasion(s): Low diversity

Allele Diversity: immigrant population(s) << global populations

Page 18: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Multiple, independent invasions: High diversity

Allele Diversity: immigrant populations ~ source populations

Page 19: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

• Microsatellite markers: Genetic diversity

Genetic differentiation

• 21 populations from 9 states

Broad-scale BB population genetics(Vargo, Booth, Saenz, Schal)

Virna Saenz

Page 20: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Across populations

• Very high genetic diversity

– 3 to 17 alleles/locus (mean = 8.4)

– But, need comparisons to “candidate” source

populations

– Suggests multiple sources

Within populations

• Very low genetic diversity

– 1 to 4 alleles/locus

– Mean relatedness of individuals

• r = 0.75 (0.5 = sibs)

– Very high levels of inbreeding

– Suggests single/few sources per infestation

Genetic diversity

Page 21: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Genetic differentiation of populations

Completely

similar

Completely

different

strong genetic differentiation!

but, no “Isolation-by-Distance”

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1

1 3 5 7 9

F ST

8100 km

ln distance

2 km 20 km 150 km 1100 km

Winston-Salem

NC

invasion & spread

local spread

Y = 0.0257X + 0.5127

R² = 0.0675

Page 22: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

• Within populations: Very low genetic

diversity & high inbreeding

– Populations appear to be founded by a singly

mated female

yet,

• Across populations: Very high genetic

diversity & high genetic differentiation

– Multiple introductions

– “Jump”, human-mediated transport

Broad-scale BB population genetics(Vargo, Booth, Saenz, Schal)

Page 23: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

May 2003 May 2004 June 2005

How do bed bugs spread within a building?

Doggett and Russell. 2008.

Page 24: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

May 2003

Doggett and Russell. 2008.

May 2004 June 2005

How do bed bugs spread within a building?

Single introduction?

Page 25: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

May 2003 June 2005

How do bed bugs spread within a building?

Doggett and Russell. 2008.

Multiple

introductions?

May 2004

Single

introduction

Page 26: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Within apartments

• Low genetic diversity 1 to 4 alleles/locus

• High relatedness r = 0.54

Among apartments

• Low genetic diversity 2 to 5 alleles/locus

Flo

ors

3rd

9th

Single!

Few!

Empirical test: BB spread within a building

How many individuals start an infestation?

How many introductions?

Raleigh, NCIsolated building, recent infestation

Page 27: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Within apartments

• Low genetic diversity 1 to 4 alleles/locus

• High relatedness r = 0.65

Among apartments

• High genetic diversity 2 to 11 alleles/locus Multiple!

Few!

Empirical test: BB spread within a building

How many individuals start an infestation?

How many introductions?

Jersey City, NJBuilding complex, old infestation

12 1211 1212 1213 1201 1202 1203 1204 1205

1210 ST 1209 EV EV 1208 1207 ST Cust 1206

10 1011 1012 1013 1001 1002 1003 1004 1005

1010 ST 1009 EV EV 1008 1007 ST 1006

9 911 912 913 901 902 903 904 905

910 ST 909 EV EV 908 907 ST 906

8 811 812 813 801 802 803 804 805

810 ST 809 EV EV 808 807 ST 806

7 711 712 713 701 702 703 704 705

710 ST 709 EV EV 708 707 ST 706

6 611 612 613 601 602 603 604 605

610 ST 609 EV EV 608 607 ST 606

5 511 512 513 501 502 503 504 505

510 ST 509 EV EV 508 507 ST 506

4 411 412 413 401 402 403 404 405

410 ST 409 EV EV 408 407 ST 406

1 111 112 113 101 102 103 104 105

110 ST 109 EV EV 108 107 ST 106

collections by Changlu Wang

1st

12th

Page 28: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Empirical test: BB spread within a building

1

2

3

4

Apt 1 Apt 2 Apt 3 Apt 4

Page 29: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Empirical test: BB spread within a building

Jersey City, NJ: 17 populations

3 genetic clusters

software: STRUCTURE

Warren Booth

Page 30: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Large scale (continental, East Coast)

• Bed bug populations come from multiple geographic

sources

• Extensive human-mediated movement of bed bugs

across large geographic areas

Interception important at transportation hubs

Fine scale (within buildings)

• Infestations often start with a single introduction, and

then spread; but also multiple introductions

Early detection critical

Forensic applications: sources of bed bug infestations

Implications of Population Genetics

Page 31: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Example 3: Genome, Transcriptome

• Genes common to BB and other insects?

• Genes common to hematophagous arthropods

• Genes and gene products unique to BB

• Why do BB not vector diseases?

• When and where genes are turned on or off

(transcripts specific to tissue-, time-, instar-,

feeding-, resistance-, etc.)

• Gene networks:

immunity, heat/cold response, feeding behavior,

sexual behavior, host-finding………

Page 32: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Example 3: Genome, Transcriptome

“Nearly 85.9% of the C.

lectularius sequences showed

similarity to insect sequences,

but 44.8% of the deduced

proteins of C. lectularius did

not show similarity with

sequences in the GenBank”

Quantitative PCR

mRNA levels for a cytochrome

P450 (CYP9) in:

pesticide-resistant (blue bars)

pesticide-susceptible (red bars)

Page 33: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Perspective: Fundamental and Translational research

• Government & private sector investments

• Innovative, medium- and long-term

• Accountable to stakeholder input

• Spawns ideas for novel tactics, products

• Research Pest control

• Apply discoveries from research in the

lab to “clinical” studies

• Break down compartmentalization

Page 34: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Collaborators & co-workers: Ed Vargo

Warren Booth, Alvaro Romero, Virna Saenz, Rick Santangelo

Changlu Wang

Blanton J. Whitmire Endowment NC State University

USDA-NIFA-AFRI

Pest management companies:

Orkin

Cooper

Rentokil/JC Ehrlich

TerminixNSF Postdoctoral Research

Fellowship in Biology

Page 35: Importance of Basic and Translational€¦ · Literature trends . 0 100 200 300 400 500 1860-1870 1871-1880 1881-1890 1891-1900 1901-1910 1911-1920 1921-1930 1931-1940 1941-1950 1951-1960

Life cycleEgg to Adult = 45 days at 26o C

Department of Medical Entomology, ICPMR, Westmead Hospital, Australia

bedbuginfo.dondodd.com/

sciencedude.ocregister.com