introduction to obis at 2nd int ocean research conference 2014
TRANSCRIPT
Ocean Biogeographic Information System
Ward AppeltansUNESCO, Intergovernmental Oceanographic Commission (IOC-UNESCO)
International Oceanographic Data and Information Exchange (IODE)Ocean Biogeographic Information System (OBIS)
Phlip GoldsteinUniversity of Colorado at Boulder
OBIS-USA
OBIS from Census of Marine Life to IODE
OBIS Organization and Status
OBIS Data, Access, and Participation
Outcomes
Global Relationships
Your Role and OBIS’s Role in biodiversity:How many species in the oceans?
OBIS: Biodiversity Data, Community, Relationships, Outcomes
From Census of Marine Life …OBIS was established as the data
repository and information dissemination system for CoML
… to UNESCO-IOC/IODE/OBIS
"Knowledge of the oceans biodiversity is of
such importance to national and global
environmental issues that the responsibility
for OBIS’s continuing success should be
assumed by governments” IOC 2009OBIS secretariat, database +
website moved from Rutgers
University (USA) to the IOC Project
Office for IODE in Oostende
(Belgium)
In June 2009, the 25th Session of the IOC Assembly decided through Resolution XXV-4 to adopt OBIS as part of IODE
OBIS Nodes(bold = NODC status, blue = thematic)
1. Antarctica / AntOBIS
2. Arctic / ArcOD/AOOS
3. Argentina / ArOBIS
4. Australia / OBIS-
Australia
5. Black Sea /
BlackSea-OBIS
6. Canada / OBIS-
Canada
7. China / OBIS-China
8. Europe / EurOBIS
MedOBIS
13.South-East Pacific /
ESPOBIS
14.South-West Atlantic /
WSAOBIS
15.South-West Pacific /
NZOBIS
16.Sub-Saharan /
AfrOBIS
17.USA/ OBIS-USA
18.Iran/ PEGO-OBIS
Philippines/ SEA-
1. Global / MicrOBIS
2. Global / OBIS-
SEAMAP
3. Global / Hexacorals
1. MicrOBIS
2. OBIS-
SEAMAP
3. Hexacorals
4. FishBase
5. Seamounts
Regional / National …
Thematic
OBIS is the world’s largest open access,
online data system on the diversity,
distribution and abundance
of marine species
> 40 million
observations
115,000 marine
species
> 1,600 datasets
> 450 data providers
in 56 countries
www.iobis.org
OBIS: Data Record of Biological Occurrences:
Named Taxon, location, date/time
The Standard: Ratified Darwin Core
Circumstances of Observation
Biological details
Sampling method
Environmental Conditions
Administrative details:
Institution and Individual Attributionand Citation Requirements
What type of data is in OBIS?Biological Occurrence Data
Occurrence data may represent:
• Specimen / Historical / Literature
• Survey data / Human Observation
• Machine Observation FUTURE
Web Site: www.iobis.org
Web services and tools: OGC, IPT
Query by dataset, taxon, location
Access by association with physical/ chemical/ climate data
How do users access OBIS Data?
Association of observation points
with oceanographyObservation data associated with
Bottom depth
Temperature
Salinity
Nitrogen / Oxygen
Phosphate / Silicate
Visualized through interactive graphs
Time-series graphs
Histograms
Climate variables from World Ocean Atlas
Association of observed species
with oceanography
Climate variables from World Ocean Atlas
Observation data associated with
Bottom depth
Temperature
Salinity
Nitrogen / Oxygen
Phosphate / Silicate
Visualized through interactive graphs
Time-series graphs
Histograms
OBIS Nodes recruit and develop data and metadata
Program Office harvests data from nodes, integrates into aggregate database
Distributed system; Nodes control their data
Nodes’ local community can be reflected in their activities and outcomes
How Do Data Become Part of OBIS?
Publications
OBIS Analysis and Baseline Products
OBIS / Synthesis Application Outcomes
OBIS Outcomes
OBIS Outcomes: PublicationMore than 900 papers have cited OBIS,
growing at ~7 papers per month
100 times series from OBIS
Number of sampling days per depth volume
99% of ocean volume is still undersampled
Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds). Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In press.
OBIS Outcomes: Analysis & Baseline Products
Nr of records through time (latitude)
Global monitoring since 1950
Progressively increased in the Southern Hemisphere
Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds). Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In press.
OBIS Outcomes: Analysis & Baseline Products
Species richness indices
Hulbert index
Completeness based on Chao2
OBIS Outcomes: Analysis & Baseline Products
OBIS Outcomes: Analysis & Baseline Products
Appeltans W., Dujardin F., Flavell M., Miloslavich P., Webb T. (2015). Biodiversity Baselines in the Global Ocean. In: Fischer A. et al (Eds). Open Ocean Technical Assessment Report for the GEF Transboundary Water Assessment Programme (TWAP). UNEP, IOC-UNESCO. In press.
Two third of known species are uniques
Species richness indices
Hulbert index per MPA
Number of IUCN threatened species
OBIS Outcomes: Analysis & Baseline Products
Invasive species
Lionfish invasion in Caribbean (black before 1985, red after 1984)
OBIS Outcomes: Analysis & Baseline Products
OBIS Application
Outcomes
These density models are used to estimate official “takes” for marine mammal protection act and endangered species act regulations in the USA
OBIS-SEAMAP
Conservation
CBD-COP10 listed OBIS as a key source of information for the
identification of Ecologically or Biologically Significant Areas (EBSAs)
Areas of high
biodiversityAreas of special
importance for the life
history of a species
Areas of significant
naturalness
Areas of unique-
ness or rarity
Area-based managementOBIS Application Outcomes
Global Science Programs / Ocean Governance
Requirements-Based
Active Outreach
Continuing Expansion
OBIS Relationships
Scientific and data management community
Historical data (setting baselines) and data from non commercial, non-target fishery species
Assessments of current knowledge, geographical and taxonomic gaps
Indicators of biodiversity, species richness and species community composition (and changes through time)
Open-access data portal, integrating biodiversity data with climate variables (temperature, salinity, oxygen…)
Capacity building (training)
OBIS RelationshipsContribution from OBIS to global programmes