investigating noroviruses: a case study · 2016. 11. 21. · a case study david bergmire-sweat, mph...

21
Investigating Noroviruses: A Case Study David Bergmire-Sweat, MPH North Carolina Department of Health and Human Services

Upload: others

Post on 06-Feb-2021

3 views

Category:

Documents


0 download

TRANSCRIPT

  • Investigating Noroviruses: A Case Study

    David Bergmire-Sweat, MPH North Carolina Department of Health and Human Services

  • Norovirus Facts

    Small, round-structured viruses from Caliciviridae family

    First recognized as pathogenic cause of gastroenteritis in 1968, Norwalk, Ohio

    Transmitted via fecal-oral route Highly contagious—as few as 10 viral

    particles can cause infection

  • Symptoms

    Incubation period ~ 24-48 hours, can be less Vomiting Watery non-bloody diarrhea Abdominal cramps Nausea Low-grade fever Symptoms typically resolve ~ 24-60 hours (1-3

    days)

  • Documented Modes of Transmission Foodhandler contamination of items in

    restaurant Daycare centers Secondary person-to-person Aerosolized (vomiting and diarrhea) Cleaning up after ill person in a bathroom

  • Immunity & Epidemiology

    Seems to be strain-specific and temporary (few months)

    CDC estimates 23 million cases of acute gastroenteritis annually in U.S. due to noroviruses

    CDC estimates noroviruses cause ~50% of all foodborne disease outbreaks

  • Detection

    Best method is via reverse transcriptase polymerase chain reaction (RT-PCR)

    Viral RNA Adults can shed viral particles for up to 2

    weeks after symptoms resolve Infants and toddlers may shed longer

  • Case Study

    Small state university north of Houston, TX

    Student body ~ 10,000 students

    2,054 students owned meal plans

    125 students present to student health center and local hospital with gastrointenteritis in 24 hr period

    http://images.google.com/imgres?imgurl=http://www.shsu.edu/~chemistry/images/buildingbig.jpg&imgrefurl=http://www.shsu.edu/~chemistry/&h=352&w=600&sz=147&hl=en&start=3&tbnid=IpwkhtBbbQ64TM:&tbnh=79&tbnw=135&prev=/images%3Fq%3DSam%2BHouston%2BState%2BUniversityhttp://images.google.com/imgres?imgurl=http://www.myhuntsvillelibrary.com/images/libfront.JPG&imgrefurl=http://www.myhuntsvillelibrary.com/linkpg.html&h=323&w=242&sz=24&hl=en&start=11&tbnid=PWsYD2wN14ad7M:&tbnh=118&tbnw=88&prev=/images%3Fq%3DSam%2BHouston%2BSthttp://images.google.com/imgres?imgurl=http://www.tletca.org/images/sam.jpg&imgrefurl=http://www.tletca.org/&h=231&w=195&sz=21&hl=en&start=12&tbnid=w5K9ZDdSTnIE1M:&tbnh=108&tbnw=91&prev=/images%3Fq%3DSam%2BHouston%2BState%2BUniversity%26gbv%3D2%26ndsp%3D20%26shttp://images.google.com/imgres?imgurl=http://www.aitp.org/images/states/flag-Texas.gif&imgrefurl=http://www.aitp.org/organization/chapters/chapterhome.jsp%3Fchapter%3D03203&h=95&w=135&sz=3&hl=en&start=270&tbnid=RErBvEPU9nwzXM:&tbnh=65&tbnw=92&prev=/images%3Fq

  • Symptoms

    125 ill students on March 10-11 1998 23 admitted to hospital 91% reported vomiting 85% reported diarrhea (3+ loose stools in

    24 hours) 68% reported abdominal cramps

  • Epidemic Curve

    0

    5

    10

    15

    20

    25

    30

    35

    Date 5-Mar

    6-Mar

    7-Mar

    8-Mar

    9-Mar

    10-Mar

    11-Mar

    12-Mar

    13-Mar

    14-Mar

    15-Mar

    Cases by Onset Date

  • Laboratory Investigation

    62 stool samples sent to Texas Department of Health Lab in Austin

    All negative for Salmonella, Shigella, Campylobacter, Yersinia, E. coli O157:H7, Bacillus cereus, and Staphylococcus aureus

    18 samples tested for Norovirus by RT-PCR; 9 were positive

  • Challenges of Cafeteria Outbreaks Verifying Exposures Identifying potential

    healthy controls Finding people to

    interview them Hundreds of food

    items Rule in/out other

    exposures

    http://images.google.com/imgres?imgurl=http://www.isls.cz/img/gallery/a615f38a3105898d4c824b0b4bfdc795.jpg&imgrefurl=http://www.isls.cz/en/gallery%3Fgid%3D36&h=300&w=400&sz=49&hl=en&start=1&tbnid=yu1lpCsWuO4_sM:&tbnh=93&tbnw=124&prev=/images%3Fq%3Duniversity%2http://images.google.com/imgres?imgurl=http://www.kevry.com/images/gallery/photos/Bowling%2520Green%2520-%2520pizza%25202.jpg&imgrefurl=http://www.kevry.com/gallery_photodex.htm&h=747&w=640&sz=62&hl=en&start=3&tbnid=lEYLAmcS0OcrsM:&tbnh=141&tbnw=121&prev=/imaghttp://images.google.com/imgres?imgurl=http://www.housing.uwaterloo.ca/residences/village1/gallery/photos/cafeteria.jpg&imgrefurl=http://www.housing.uwaterloo.ca/residences/village1/gallery/cafeteria.html&h=375&w=500&sz=68&hl=en&start=99&tbnid=buo9LSlaZLkdJM:&http://images.google.com/imgres?imgurl=http://msnbcmedia2.msn.com/j/msnbc/Components/Photos/060821/060821_frosh_15_hmed_8a.hmedium.jpg&imgrefurl=http://www.msnbc.msn.com/id/14452318/&h=273&w=418&sz=32&hl=en&start=92&tbnid=KgrS6ro1Z7QmYM:&tbnh=82&tbnw=125&prev=

  • Rapid Action

    Outbreak occurred toward end of week, right before Spring Break

    Sanitarians from local health department investigated, realized cafeteria was about to close for week and perform massive cleaning/maintenance

    Locked down all present food items, instructed staff not to throw anything out

  • Epidemiologic Investigation

    Unmatched Case-control study by Texas Dept. of Health

    36 ill subjects 136 well controls

    Matched Case-control study by CDC

    29 ill subjects 29 well controls

  • Findings – Matched Study Exposure Odds Ratio Confidence

    Intervals P value

    Deli sandwich 3/9 lunch

    11.0 1.6-473 < 0.01

    Deli sandwich 3/9 supper

    6.0 0.7-276 0.06

    Deli sandwich 3/10 lunch

    8.0 1.1-355 0.02

    Deli sandwich 3/10 supper

    1.0 0.01-79 .75

  • Findings – Unmatched Study Exposure Odds Ratio Confidence

    Intervals P value

    Deli sandwich 3/9 lunch

    11.1 3.9-32 < 0.001

    Deli sandwich 3/9 supper

    7.1 1.6-33

  • Interpretation

    Both studies implicated deli sandwiches on 3/9 and 3/10

    The more controls in a study, the better statistical power you have

    No other restaurants or food items showed any association

  • Cafeteria Staff Investigation

    Sanitarians and epidemiologists interviewed foodhandlers

    All denied illness All except one submitted stool samples for

    testing One refused; cafeteria manager fired her She was responsible for slicing deli meats

    and making deli sandwiches

  • Discussion

    CDC and TDH epidemiologists were disappointed with cafeteria manager decision to fire the one employee

    Much more difficult to get cooperation Eventually did interview her She denied illness, but had infant with

    diarrhea Stool sample from infant was PCR

    positive for Norovirus

  • Chance to Learn Something

    Researchers at Baylor College of Medicine agreed to try to find virus RNA on deli meat

    Never been done before

    http://images.google.com/imgres?imgurl=http://www.hormel.com/images/glossary/c/coldcuts.jpg&imgrefurl=http://www.hormel.com/kitchen/glossary.asp%3Fid%3D33424&h=153&w=288&sz=13&hl=en&start=41&tbnid=U3SGrUhmYVv_5M:&tbnh=61&tbnw=115&prev=/images%3Fq%3Ddeli%2Bmeathttp://images.google.com/imgres?imgurl=http://www.deli-food-meat-slicers.com/Images/chefs_choice_662_225.jpg&imgrefurl=http://www.deli-food-meat-slicers.com/&h=177&w=225&sz=25&hl=en&start=82&tbnid=MGAUrOksVzKZ0M:&tbnh=85&tbnw=108&prev=/images%3Fq%3Ddeli%2Bmeathttp://images.google.com/imgres?imgurl=http://www.stanford.edu/class/humbio103/ParaSites2004/Onchocerciasis/pcr.png&imgrefurl=http://www.stanford.edu/class/humbio103/ParaSites2004/Onchocerciasis/diagnosis.htm&h=480&w=640&sz=911&hl=en&start=10&tbnid=COviMEppv5Yhttp://images.google.com/imgres?imgurl=http://www.fbs.leeds.ac.uk/ggepl/images/PCR_machines.JPG&imgrefurl=http://www.fbs.leeds.ac.uk/ggepl/English/visitor_info.htm&h=227&w=302&sz=22&hl=en&start=6&tbnid=ZhIGA3qScehoaM:&tbnh=87&tbnw=116&prev=/images%3Fq%3DPCR%2B

  • Success!

    Lab successful in designing protocol for recovering virus RNA from deli meat

    Pulsed-Field Gel analysis of PCR results showed identical pattern between infant, ill students, and deli meats

    http://images.google.com/imgres?imgurl=http://www.nih.go.jp/JJID/56/137F1.jpg&imgrefurl=http://www.nih.go.jp/JJID/56/137.html&h=786&w=600&sz=152&hl=en&start=3&tbnid=pAgf9rqDOR87YM:&tbnh=143&tbnw=109&prev=/images%3Fq%3Didentical%2BPFGE%2Bpattern%2B%26gbv%3D2%26

  • Take Home Points

    Viral gastroenteritis is easy to spread Foodhandlers must be extremely careful,

    even when they are not sick, with hygiene It is possible to recover Norovirus from

    food Quick reaction by local health department

    sanitarians preserved food samples Collaboration with research lab advanced

    science of food safety research

    Investigating Noroviruses: A Case StudyNorovirus FactsSymptoms Documented Modes of TransmissionImmunity & EpidemiologyDetection Case StudySymptomsEpidemic CurveLaboratory InvestigationChallenges of Cafeteria OutbreaksRapid ActionEpidemiologic InvestigationFindings – Matched StudyFindings – Unmatched StudyInterpretationCafeteria Staff InvestigationDiscussionChance to Learn SomethingSuccess!Take Home Points