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ITC (Isothermal Titration Calorimetry) 황황황

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Page 1: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC(Isothermal Titration Calorimetry)

황정현

Page 2: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Contents

Introduction

ITC technology

Principle

Application

Data analysis

Summary

Page 3: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Introduction

Page 4: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

IntroductionIsothermal Titration Calorimetry

Iso- : 같은 , 동 ( 同 )-, 등 ( 等 )-

Thermal : ‘ 열’의

Titration : 적정

Calorimetry : 열량 측정

calorimeter 열량계

Page 5: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Thermometric TitrationA number of instrumental titration tech-niques

Accurate and precise without a subjective

interpretation

Reported early in the 20th century

(Bell and Cowell, 1913)

Page 6: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC Technology

Page 7: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC technologyCalometer 를 이용한 the heat of a reaction

측정법

현재 , engineering 과 computer 기술이 적용 .

자동화된 software 를 사용

DSC (differential scanning calorimeter)

ITC (isothermal titration calorimeter)

Page 8: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Differential Scanning Calorimeter

(1/4)시차주사 열량법

온도 변화에 따른 열에너지 변화를 측정고분자 물질 연구에 많이 이용

시료물질과 기준물질을 동시에 가열 / 냉각시켜시료의 열 출입을 측정

기준물질 : 가열로의 온도조절에 따라

시료물질 : 주어지는 온도에 의해

Heat flux plate 에 의해 열량 값을 얻음

Page 9: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Differential Scanning Calorimeter

(2/4)

Page 10: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Differential Scanning Calorimeter

(3/4)

Page 11: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Differential Scanning Calorimeter

(4/4)

Page 12: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

DSC thermogram (1/2)Glass transition temperature(Tg)

Melting temperature(Tm)

Crystallization temperature(Tc)

결정화 시간 , 순도 , 산화 , 분해

Page 13: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

DSC thermogram (2/2)

Page 14: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Isothermal Titration Calorimeter (1/6)Biomolecular

interactions 에 관한

연구

protein-ligand

protein-DNA

Antibody-antigen

Hormone-receptor

Page 15: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Isothermal Titration Calorimeter (2/6)모든 binding

parameter 를 측정

Binding 이 나타날 때Heat is taken up

- Absorbed

- endothermic

Heat is evolved- Released

- exothermic

Page 16: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Isothermal Titration Calorimeter (3/6)

Page 17: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Isothermal Titration Calorimeter (4/6)Reference and sam-ple cell are identical.Aliquots of the sec-ond binding partner are added with a stirring syringeThe sample cell is mixed with stirring paddles at the sy-ringe tip.

Page 18: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Isothermal Titration Calorimeter (5/6)The reference cell is

electrical heated preset steady temperature.

The temperature difference between reference and sample cell is measured.

Page 19: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Isothermal Titration Calorimeter (6/6)

Page 20: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC – Before Titration

Page 21: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Titration Begins : First Injection

Page 22: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Return to Baseline

Page 23: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Second Injection

Page 24: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Second Return to Baseline

Page 25: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Injections Continue

Page 26: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Injections Continue

Page 27: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

End of Titration

Page 28: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC – Fitting the Data (1/3)

Page 29: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC – Fitting the Data (2/3)The peaks from the upper panel raw data are integrated plotted with respect to the concentra-tions of the inter-acting components as molar heats(y-axis) and molar ra-tio(x-axis).

Page 30: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ITC – Fitting the Data (3/3)Fitting of this curve

gives the

parameters derived

in the text.

Page 31: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Principle

Page 32: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

PrincipleBiological macromolecules 의 interaction

Molecular recognition 의 complexity and

diversity

Immune response, signal transduction cas-

cades, gene expression 등 중요 요인에

대한 관심과 적용

Page 33: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

연관변수를 측정하여 대상의 정체를 확인

n : Stoichiometry of the interaction

Ka : Association constant

Kd : Dissociation constant

ΔGb : Free energy

ΔHb : Enthalpy

ΔSb : Entropy

ΔCp : Heat capacity of binding

Basic Thermodynamics (1/9)

Page 34: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

At Protein-Ligand Interactions

The First Law of Thermodynamics

열역학 제 1 법칙

ΔE=Q+W

ΔE represents the change in the energy

Q the heat absorbed by the system

W the work done on the system

Basic Thermodynamics (2/9)

Page 35: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

At Protein-Ligand Interactions

The Second Law of Thermodynamics열역학 제 2 법칙

고립계에서 총 entropy( 무질서도 ) 의 변화는 항상 증가하거나 일정하며 절대로 감소하지 않는다 .

에너지는 방향이 있다는 것이다 .

ΔS≥0부등호는 비 가역과정을 나타내고등호는 가역과정을 나타낸다 .

Basic Thermodynamics (3/9)

Page 36: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

At Protein-Ligand Interactions

The Second Law of Thermodynamics

or

By defining change in “Entropy” as

or

0

T

Q0

T

Qd reversible

T

QS

0 gsurroundinsystem SS 0dS

Basic Thermodynamics (4/9)

Page 37: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

At Protein-Ligand Interactions대부분의 protein-ligand interactions

At constant temperature & PressureOnly work is –PΔV

We can change this term to ΔH, then

0

T

VPES systemsystem

VPE

0

T

HS 0 HST

Basic Thermodynamics (5/9)

Page 38: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

With the definition of (Gibbs) 'Free Energy' as

ΔG < 0 : spontaneous change

ΔG = 0 : Equilibrium

STHG

STHKRTG b ln

Basic Thermodynamics (6/9)

Page 39: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

ΔH 의 효용성

Direct measurement of heat of reaction

No ΔPV-work is the same as ΔH

PVHE

HE

Basic Thermodynamics (7/9)

Page 40: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Indirect measureUtilizes a simplified relationshipThe Van't Hoff Equation

Gibbs Free Energy Equation

At steady state, at which ΔG=0, then

Basic Thermodynamics (8/9)

LPPL

K

PLLP

eq

LP

PLln0 RTGG

LP

PLln0 RTG

Page 41: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Gibbs Free Energy Equation

This is an integrated form of theVan't Hoff Equation

Basic Thermodynamics (9/9)

dd

eq KRTK

RTKRTG ln1

lnln0

R

S

TR

HKd

00 1ln

2

0ln

RT

H

dT

Kd eq

Page 42: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Van't Hoff equation(1/2)

평형 상수의 자연로그와 온도의 역수 값에 대한그래프는 직선을 그린다 .이 직선의 기울기는 엔탈피의 변화량을기체상수로 나누어준 값의 음의 값이다 .절편값은 엔트로피의 변화량을 기체상수로나누어준 값이다 .이 식을 미분형태로 표현한 것이Van't Hoff Equation 이다 .

R

S

TR

HKd

00 1ln

Page 43: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Van't Hoff equation(2/2)온도 변화에 따른 평형상수 (K) 의 변화 비를엔탈피 변화를 이용하여 표현

2

0ln

RT

H

dT

Kd eq

Page 44: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Application

Page 45: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Application실험 data 는 protein-ligand 연구정보를

참고하여 분석

MEDLINE search

ITC equipment suppliers

Page 46: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

MEDLINE

Medical Literature Analysis and Retrieval

system Online

Bibliographic database of life science and

biomedical information

Medicine, nursing, pharmacy, dentistry,

health care, biology, biochemistry and

molecular evolution

Searchable via PubMed

Page 47: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary
Page 48: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Data Analysis

Page 49: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

생물리학 연계성

Thermodynamic parameters 를 측정

생체 물질의 interaction

Drug 나 Enzyme 에 관련해서 직접적으로

축적된 3-D protein structures 의 이해

여러 가지 결합 상황을 예측 , design 가능

Weak forces 로 이루어지는 protein-ligand

interaction 을 분석 , 추정

Page 50: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Summary

Page 51: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

Advantages / Disadvantages

Advantages

Immobilization or

labeling 이 필요 없다 .

다양한 적용 범위

Kd, ΔH 측정

다른 온도와 pH 에서

가능

Disadvantages

Enormous amounts

of binding partner

Only medium affin-

ity

많은 membrane

proteins 에 제약

비싼 가격

Page 52: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary
Page 53: ITC (Isothermal Titration Calorimetry) 황정현. Contents Introduction ITC technology Principle Application Data analysis Summary

SummaryThermodynamic parameters

Characterization and understanding of chemi-cal

reaction

Protein-ligand 영역으로의 확장Drug-discovery 등의 다양한 영역에 실용적

이전 van't Hoff technique 에서 발전Modern, automated, high-sensitivity calorime-try equipment

Proteinomics 관심 대상Biomolecules 의 folding 이나 ligands 의 결합