lecture 27 thermodynamics: enthalpy, gibbs free energy...

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Physical Principles in Biology Biology 3550 Fall 2017 Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy and Equilibrium Constants Wednesday, 1 November c David P. Goldenberg University of Utah [email protected]

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Page 1: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

Physical Principles in BiologyBiology 3550

Fall 2017

Lecture 27

Thermodynamics: Enthalpy, Gibbs Free Energy

and Equilibrium Constants

Wednesday, 1 November

c©David P. GoldenbergUniversity of Utah

[email protected]

Page 2: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Second Law of Thermodynamics

For a spontaneous process:

∆Suniv = ∆Ssys + ∆Ssurr

Entropy change for the system (constant T):

∆Ssys =qrevT

= nk lnΩ2

Ω1

Entropy change for the surroundings:

∆Ssurr = − q

T

q is heat absorbed for specified process.

Flow of heat to surroundings represents an increase in entropy of thesurroundings.

Entropy of the system can decrease in a spontaneous process, if thereis a flow of heat to the surroundings.

Page 3: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

Thermodynamics and Chemical Reactions

A −−−−−− B

Changes in potential energy:

Forming a chemical bond reduces potential energy of molecules andreleases energy.

Breaking a chemical bond increases potential energy of molecules andabsorbs energy.

If the potential energy is released, where can that energy go?• Thermal energy (temperature) increases.

• Heat flows out of the system. (q < 0)

• Work is done by the system. (w < 0)

• Some combination of the above.

Page 4: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

J. Willard Gibbs

1839–1903

Arguably the first great American theoretical scientist.

Consolidated thermodynamics into a consistent theory.

Applied thermodynamics to chemistry.

Also made important contributions in math and optics.

Page 5: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

A New State Function: Enthalpy (H)

Enthalpy, H , is closely related to the internal energy, E .

H = E + PV

The product PV has the units of energy or work.

For a process at constant pressure:

∆H = ∆E + P∆V

P∆V is work due to a change in volume at constant pressure.

Two new quantities:• wp = −P∆V = work done on system in constant pressure process

• qp = heat absorbed by system in constant pressure process

From the first law:

∆E = qp + wp = qp − P∆V

∆H = ∆E + P∆V = qp

Page 6: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

A New State Function: Enthalpy (H)

Two consistent definitions for ∆H at constant pressure:

∆E minus work due to volume change

∆H = ∆E + P∆V

= ∆E − wp

If there is no volume change, then wp = 0, and ∆H = ∆E .

The heat absorbed during the constant pressure process:

∆H = qp

Chemical and biochemical reactions are usually studied underconditions of constant (or nearly constant) pressure, and ∆V is usuallyvery small.

∆H can be experimentally measured.

Page 7: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

Measuring ∆H with a Calorimeter

Water

Reaction

Thermometer

Insulation

If ∆H < 0, heat flows from the reaction vessel and warms the water.

If ∆H > 0, heat flows into the reaction vessel, and water temperaturedecreases.

∆H = −∆Twater

mass of water (g)(in calories)

Page 8: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

Clicker Question #1

Which of the following is true at constant pressure?

Choose two.

1 ∆H = ∆E + P∆V

2 ∆H = ∆E + V∆P

3 ∆H = qrev

4 ∆H = wrev

5 ∆H = qp

6 ∆H = wp

Page 9: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Gibbs Free Energy

G = H − TSsys

For a process at constant temperature:

∆G = ∆H − T∆Ssys

For a process at constant temperature and constant pressure:

∆G = qp − T∆Ssys

Since ∆Ssurr = −q/T , qp = −T∆Ssurr at constant pressure.

∆G = −T∆Ssurr − T∆Ssys = −T (∆Ssurr + ∆Ssys)

= −T∆Suniv

Or, ∆Suniv = −∆G/T

Page 10: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Gibbs Free Energy is Used to Apply the Second Law

From the previous slide:

∆Suniv = −∆G/T

If ∆G < 0• ∆Suniv > 0, and the process will be spontaneous.

If ∆G > 0• ∆Suniv < 0, and the reverse process will be spontaneous.

If ∆G = 0• ∆Suniv = 0, and the process is reversible.

(Can be pushed in either direction.)

• ∆G = 0 defines a system at equilibrium.

All based on state functions of the system!

Don’t have to worry about the surroundings.

Page 11: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

Clicker Question #2

Which of the following is true at constant pressureand constant temperature?

Choose two.

1 ∆G = ∆H − T∆Suniv

2 ∆G = ∆H − T∆Ssys

3 ∆G = −T∆Ssurr − T∆Ssys

4 ∆G = T∆Ssurr − T∆Ssys

5 ∆G = −T∆Ssurr − qp/T

Page 12: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

What About Free Energy as Energy Available to do Work?

The change in Helmholtz free energy, as previously defined:

∆F = wrev

The maximum work available from a process.

From the first law:

∆E = qrev + wrev

wrev = ∆E − qrev

∆F = ∆E − qrev

For a constant-temperature process:

∆Ssys =qrevT

qrev = T∆Ssys

∆F = ∆E − T∆Ssys

Page 13: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Helmholtz Free Energy

For a constant temperature process:

∆F = ∆E − T∆Ssys

The standard definition of the Helmholz free energy:

F = E − Ssys

Compare to:

∆G = ∆H − T∆S

Since ∆H = ∆E − wp (a few slides back):

∆G = ∆F − wp

wp is work due to volume change at constant pressure.

Page 14: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Helmholtz Free Energy

From previous slide:

∆G = ∆F − wp

If volume change is small and wp can be ignored:• ∆G = ∆F

• If ∆G < 0: Process is favorable, and maximum work availablefrom the process = −∆F = −∆G

• If ∆G > 0: Process is unfavorable, and minimum work requiredto drive the process = ∆F = ∆G

Commonly made assumptions for chemical reactions indilute solutions:

• P∆V = −wp ≈ 0

• ∆H ≈ ∆E

• ∆G ≈ ∆F

Page 15: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Equilibrium Constant for a Chemical Reaction

A −−−−−− B

The reaction can occur in either direction. (at least in principle)

The probability that any molecule of A will be converted to a moleculeof B is the same as for any other molecule of A.

• The total rate of conversion of A to B is proportional to the concentrationof A.

• Similarly, the total rate of conversion of B to A is proportional to theconcentration of B.

A differential equation:

d [A]

dt= −kf [A] + kr[B]

The constants kf and kr are called rate constants.

Page 16: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Equilibrium Constant for a Chemical Reaction

A −−−−−− B

From the previous slide: d [A]

dt= −kf [A] + kr[B]

Similarly:d [B]

dt= kf [A] − kr[B] = −

d [A]

dt

Whatever the starting concentrations, [A] and [B] will eventually adjustso that they no longer change.

At equilibrium:d [A]

dt= −

d [B]

dt= 0

− kf [A] + kr[B] = 0

Page 17: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Equilibrium Constant for a Chemical Reaction

A −−−−−− B

At equilibrium:

d [A]

dt= −

d [B]

dt= −kf [A]eq + kr[B]eq = 0

[A]eq and [B]eq are the concentrations of A and B at equilibrium.

Rearranging:

kr[B]eq = kf [A]eq

[B]eq

[A]eq=

kfkr

= Keq

Keq is defined as the equilibrium constant.

Page 18: Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy …courses.biology.utah.edu/goldenberg/biol3550/lectMaterial/slides/... · Lecture 27 Thermodynamics: Enthalpy, Gibbs Free Energy

The Equilibrium Constant for a Chemical Reaction

A −−−−−− B Keq =[B]eq

[A]eq

At equilibrium, a little bit of work can push the reaction in eitherdirection.

This defines the condition where ∆G = 0

Definition of ∆G for a chemical reaction:

The free energy change for converting one mole of reactants to onemole of products, at specified concentrations, without significantlychanging concentrations(!).

Implies a very, very large volume!

Or, a mechanism that restores concentrations continuously.