microarray analysis of candidate genes in multiple intestinal atresia with immunodeficiency
TRANSCRIPT
J ALLERGY CLIN IMMUNOL
VOLUME 125, NUMBER 2
Abstracts AB75
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294 Microarray Analysis of Candidate Genes in MultipleIntestinal Atresia with Immunodeficiency
K. Chen, S. A. McGhee, E. R. B. McCabe; UCLA, Los Angeles, CA.
RATIONALE: Multiple intestinal atresia with immunodeficiency (MIA-
I) is a rare disorder characterized by multiple atretic regions throughout
the gut in addition to varying forms of combined immunodeficiency. The
affected bowel demonstrates a histological sieve-like appearance, and sur-
vival is extremely poor. The pathogenesis remains unknown, but familial
case reports suggest an autosomal recessive pattern of inheritance. DNA
microarray analysis was performed in a cohort with MIA-I to identify can-
didate genes.
METHODS: Clinical history was obtained from medical records. DNA
was isolated from whole blood and/or saliva of living individuals with
MIA-I and their families. For deceased individuals with MIA-I, DNA
was isolated from paraffin-embedded tissues. Genotyping and copy num-
ber variation analysis was completed using a genome-wide SNP microar-
ray platform. Transmission/disequilibrium test analysis was performed to
identify associations with the MIA-I phenotype.
RESULTS: SNP genotyping and genetic analysis of three families with
MIA-I identified potential gene candidates. Initial homozygosity mapping
of microarray data from one family did not identify SNP associations.
Copy number variation analysis of an early candidate gene, CASR, did
not identify significant differences.
CONCLUSIONS: Multiple intestinal atresia with immunodeficiency re-
sults in total loss of gut function and has an extremely poor prognosis.
SNP microarray analysis can be used to identify gene candidates in this
rare disorder. However, collaboration with other major referral centers
will be extremely important in studying additional patients to delineate
the pathogenesis of MIA-I.
295 Combined Immunodeficiencies: Clinical, ImmunologicalFeatures And Outcome Of 56 Cases From A Single Institution
A. _Ikinciogulları1, F. Dogu1, C. Aytekin2, F. E. Cxipe1, M. Y€uksek3,
G. Bozdogan4, A. Yıldıran5, D. G€uloglu1, E. Babacan1; 1Ankara University,
School of Medicine, Department of Pediatric Immunology-Allergy, Ankara,
TURKEY, 2Dr. Sami Ulus Training and Research Children’s Hospital,
Department of Pediatric Immunology, Ankara, TURKEY, 3Zeynep Kamil
Training and Research Hospital, Department of Pediatric Immuno-
logy, _Istanbul, TURKEY, 4Acıbadem Hospital, Department of Pediatric
Immunology-Allergy, _Istanbul, TURKEY, 5Ondokuz Mayıs University,
School of Medicine, Department of Pediatric Immunology, Samsun,
TURKEY.
RATIONALE: Combined T and B cell Immunodeficiencies (CID) com-
prise a collection of genetic defects that involve both cellular and humoral
immunity.
METHODS: In this retrospective study, an analyze regarding to clinical,
immunological features and outcome of CID patients followed up between
1999-2009 at the Department of Pediatric Immunology and Allergy of
Ankara University are given.
RESULTS: Patient’s diagnosis are as follows: Severe combined immuno-
deficiency (SCID) (n531), Omenn’s Syndrome (n56), PNP Deficiency
(n52), MHC Class I Deficiency (n54), MHC Class II Deficiency (n59),
CD40 Ligand Deficiency (n52), DNA Ligase 4 Deficiency (n51) and
Stat5b Deficiency (n51). Twenty-one out of 56 cases (37.5%) are girls
and the rest are boys. Parental consanguinity varies beetween 57-100%
in different subgroups. Median age at diagnosis is 5.5, 4.2, 32, 16, 6,
11.5 months in SCID, Omenn’s Syndrome, PNP Deficiency, MHC Class
I Deficiency, MHC Class II Deficiency, CD40 Ligand Deficiency respec-
tively. Among SCID cases, T-B-NK+ (55%) is found to be the most com-
mon immunophenotype. 27 patients among 56 (19 SCID, 2 Omenn’s
Syndrome, 3 MHC Class II Deficiency, 1 CD40L deficiency, 1 DNA
Ligase 4 Deficiency, 1 PNP Deficiency) treated with hematopoietic stem
cell transplantation (HSCT). Donor origin was matched related family
members in 14 patients and haploidentical parents in 13. The overall sur-
vival is 63% following HSCT.
CONCLUSIONS: T-B- SCID subtype seems to be the most prominent
group among combined immunodeficiencies due mainly to high parental
consanguinity rate in Turkey. Life expectancy other than HSCT is very
short and unfavourable in severe clinical forms of CID.
296 "Diverse Clinical and Immunologic Phenotypes in Patientswith Autosomal Recessive Hyper-IgM Syndrome Caused byMutations in the AICDA Gene"
T. Harvey, K. Paris; LSU Health Sciences Center, New Orleans, LA.
RATIONALE: Patients with Hyper-IgM syndrome (HIGM) caused by
mutations in activation-induced cytidine deaminase (AICDA) are rare,
and novel mutations may have unique clinical presentations and outcomes
that differ from other forms of HIGM.
METHODS: Using chart review, three patients with HIGM due to AICDA
mutations were identified at our regional referral center and their clinical
and immunologic phenotypes and genotype were compared.
RESULTS: Three male patients were found to have AR HIGM. Clinical
presentation varied from 1 to 5 years of age. Patient 1 presented at age 5
years with a complex history of knee and joint pain since age 2 years.
He had no history of recurrent sinopulmonary infections. Patient 2 pre-
sented at age 17 months with recurrent sinopulmonary infections since
age 1 month. Patient 3 (sibling of patient 2) presented at age 1 year with
infections since age 1 month. Despite his known family history, he had
not been evaluated earlier. At diagnosis, all patients had hypogammaglob-
ulinemia with elevated IgM concentrations ranging from 197 mg/dl to
1920mg/dl. Sequencing analysis of the AICDA gene showed a missense
mutation (p.Ala111Glu) in patient one and 2 missense mutations
(p.Phe11Ile and p.Gly100Ala) in the second and third patients. All three
patients improved clinically on IgG replacement therapy.
CONCLUSIONS: HIGM caused by AICDA mutations causes defective
immunoglobulin diversification with varying clinical manifestations but
not all patients present with recurrent infections. Recognition of the nonin-
fectious complications associated with these genetic defects is essential for
proper diagnosis and treatment, which improve quality of life and may be
lifesaving.
297 Mortality Among Primary Immunodeficient Patients in KuwaitW. Al-Herz; Al-Sabah Hospital, Kuwait, KUWAIT.
RATIONALE: The aim of this project is to report mortality among pri-
mary immunodeficient patients in Kuwait.
METHODS: Data were obtained from Kuwait National Primary
Immunodeficiency Disorders Registry which was established in 2004.
RESULTS: A total of 114 patients were registered (male: female ratio
51.3), with a follow-up of 65.23 months. The distribution of these patients
according to each primary immunodeficiency category was: combined T-
and B- cell immunodeficiencies (24%), predominantly antibody immuno-
deficiency (27%), other well defined immunodeficiencies (27%), diseases
of immune dysregulation (13%), congenital defects of phagocyte number,
function or both (6%) and complement deficiencies (3%). There were 26
deaths (23%) with male: female ratio of 0.85. The deaths were between
0.2 and 61.33 months after diagnosis. The age of death ranged between
2 to 156 months, with a mean of 23.04+33.32 months. Sixteen deaths
(62%) were in the combined T-and B- cell immunodeficiencies group
with a mean age of death in this group of 10.06+7.46 months. The overall
post-diagnosis survival rate was 77.2% during the whole follow-up period.
The patients’ survival was influenced by gender, primary immunodefi-
ciency category, consanguineous marriages in the patients’ families, fam-
ily history of primary immunodeficiency, use of IVIG and antimicrobials
prophylaxis, and younger age at presentation. The causes of death in the
reported patients were respiratory failure with ARDS secondary to pneu-
monia, sepsis, liver, renal and multiorgan failure.
CONCLUSIONS: Our data show a high mortality rate among the
registered patients probably related to the high number of patients with
combined T- and B- cell immunodeficiencies.