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MURDOCH RESEARCH REPOSITORY This is the author’s final version of the work, as accepted for publication following peer review but without the publisher’s layout or pagination. The definitive version is available at http://dx.doi.org/10.1016/j.ecss.2013.03.014 French, B., Clarke, K.R., Platell, M.E. and Potter, I.C. (2013) An innovative statistical approach to constructing a readily comprehensible food web for a demersal fish community. Estuarine, Coastal and Shelf Science, 125 . pp. 43-56. http://researchrepository.murdoch.edu.au/15135/ Copyright: © 2013 Elsevier Ltd. It is posted here for your personal use. No further distribution is permitted.

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  • MURDOCH RESEARCH REPOSITORY

    This is the author’s final version of the work, as accepted for publication following peer review but without the publisher’s layout or pagination.

    The definitive version is available at http://dx.doi.org/10.1016/j.ecss.2013.03.014

    French, B., Clarke, K.R., Platell, M.E. and Potter, I.C. (2013) An

    innovative statistical approach to constructing a readily comprehensible food web for a demersal fish community.

    Estuarine, Coastal and Shelf Science, 125 . pp. 43-56.

    http://researchrepository.murdoch.edu.au/15135/

    Copyright: © 2013 Elsevier Ltd.

    It is posted here for your personal use. No further distribution is permitted.

    http://dx.doi.org/10.1016/j.ecss.2013.03.014http://researchrepository.murdoch.edu.au/15135/

  • Accepted Manuscript

    An innovative statistical approach to constructing a readily comprehensible food webfor a demersal fish community

    Ben French, K. Robert Clarke, Margaret E. Platell, Ian C. Potter

    PII: S0272-7714(13)00140-6

    DOI: 10.1016/j.ecss.2013.03.014

    Reference: YECSS 4101

    To appear in: Estuarine, Coastal and Shelf Science

    Received Date: 29 November 2012

    Revised Date: 6 March 2013

    Accepted Date: 16 March 2013

    Please cite this article as: French, B., Clarke, K.R., Platell, M.E., Potter, I.C., An innovative statisticalapproach to constructing a readily comprehensible food web for a demersal fish community, Estuarine,Coastal and Shelf Science (2013), doi: 10.1016/j.ecss.2013.03.014.

    This is a PDF file of an unedited manuscript that has been accepted for publication. As a service toour customers we are providing this early version of the manuscript. The manuscript will undergocopyediting, typesetting, and review of the resulting proof before it is published in its final form. Pleasenote that during the production process errors may be discovered which could affect the content, and alllegal disclaimers that apply to the journal pertain.

    http://dx.doi.org/10.1016/j.ecss.2013.03.014

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    An innovative statistical approach to constructing a readily comprehensible food web for a

    demersal fish community

    Ben Frencha, K. Robert Clarkea,b, Margaret E. Platella,c and Ian C. Pottera* a Centre for Fish and Fisheries Research, Murdoch University, South Street, Murdoch, Western Australia, 6150 b Plymouth Marine Laboratory, Prospect Place, West Hoe, Plymouth PL1 3DH, United Kingdom c School of Environmental and Life Sciences, University of Newcastle, Brush Rd, Ourimbah, New South Wales, 2258 *Corresponding author [email protected] Tel: 61 (08) 9239 8801 Fax: 61 (08) 9239 8808

    Abstract

    Many food webs are so complex that it is difficult to distinguish the relationships between predators

    and their prey. We have therefore developed an approach that produces a food web which clearly

    demonstrates the strengths of the relationships between the predator guilds of demersal fish and

    their prey guilds in a coastal ecosystem. Subjecting volumetric dietary data for 35 abundant

    predators along the lower western Australia coast to cluster analysis and the SIMPROF routine

    separated the various species x length class combinations into 14 discrete predator guilds.

    Following nMDS ordination, the sequence of points for these predator guilds represented a ‘trophic’

    hierarchy. This demonstrated that, with increasing body size, several species progressed upwards

    through this hierarchy, reflecting a marked change in diet, whereas others remained within the same

    guild. A novel use of cluster analysis and SIMPROF then identified each group of prey that was

    ingested in a common pattern across the full suite of predator guilds. This produced 12 discrete

    groups of taxa (prey guilds) that each typically comprised similar ecological/functional prey, which

    were then also aligned in a hierarchy. The hierarchical arrangements of the predator and prey guilds

    were plotted against each other to show the percentage contribution of each prey guild to the diet of

    each predator guild. The resultant shade plot demonstrates quantitatively how food resources are

    spread among the fish species and revealed that two prey guilds, one containing cephalopods and

    teleosts and the other small benthic/epibenthic crustaceans and polychaetes, were consumed by all

    predator guilds.

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    Introduction

    There has been an increasing and worldwide recognition of the need to adopt an ecosystem-

    based approach to fisheries management (EBFM) in order that ecosystems, and thus the fisheries

    they support, are sustained in a healthy state (Ecosystems Principles Advisory Panel, 1996; Bergen

    Declaration, 2002; Essington and Punt, 2011; Espinoza-Tenorio et al., 2012). Such an approach

    involves considering the ecosystem as a whole, rather than just the target species, and thus

    represents a holistic approach that emphasises the importance of understanding the reciprocal

    interactions of humans and marine resources (Pikitch et al., 2004; Curtin and Prellezo, 2010;

    Dickey-Collas et al., 2010; Espinoza-Tenorio et al., 2012). In its report to the United States

    Congress, the Ecosystem Principles Advisory Panel (1996) recommended that a Fisheries

    Ecosystem Plan (FEP) should be developed and that this should involve a series of actions. One of

    the eight suggested actions included the proposal that a conceptual model of the food web in an

    ecosystem should be constructed, based on data for the predator and prey of each targeted species

    over time. This would then permit the anticipated effects of the allowed harvest on predator-prey

    dynamics to be addressed.

    The production of a sound food web requires a thorough understanding of the trophic

    interrelationships of the main fished and unfished species in that ecosystem. Such webs are

    traditionally constructed using the trophic interactions between the various predators and their prey

    and is typically based on analyses of gut contents and/or stable isotope ratios (Ecosystems

    Principles Advisory Panel, 1996; de Ruiter et al., 2005; Field and Francis, 2006; Moloney et al.,

    2011). When developed from gut content data, they are often represented by complex ‘spider-web’

    or ‘birds-nest’ diagrams (e.g. Hori et al., 1993; Link, 2002). Consequently, they are often so

    complex that they “conceal more than they reveal” and, as a result, fundamental patterns may be

    obscured by the high level of detail (Raffaelli, 2000). The need to reduce the complexity of the

    representation of the interactions between predators and their prey led many workers to combine

    predator species into either functional groups (Raffaelli, 2000) or trophic guilds that comprise

    species with similar prey (Root, 1967; Bulman et al., 2001; Reum and Essington, 2008) and thereby

    reduce the number of entities within the food web. This thereby facilitates a clearer understanding

    of the main aspects of the structure and function of ecosystems (Fulton et al., 2007) and the

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    potential for interspecific competition (Pianka, 1980). Scientists have also attempted to reduce the

    complexity of food webs by decreasing the number of prey entities through, for example,

    combining them into functional categories (e.g. Reum and Essington, 2008). The above efforts to

    reduce complexity involve a degree of subjectivity regarding the level and extent to which the

    predator and/or prey species are grouped, which has often varied among studies and thus hindered

    comparisons between studies.

    The dietary compositions of many fish species change as those species increase in body size

    (Werner and Gilliam, 1984; Blaber and Bulman, 1987; Platell et al., 1998a, 2010; Shepherd and

    Clarkson, 2001; Cocheret de la Morinière et al., 2003; French et al., 2012) and also sometimes

    change with time of year (Jaworski and Ragnarsson, 2006; Lek et al., 2011; Schückel et al., 2011).

    It is thus necessary to consider whether the details of the food web are influenced by the body sizes

    of the various species and/or are related to season, recognising that although a number of species

    may undergo size-related and/or seasonal changes, they may not all follow the same trends and

    body size may thereby not exert an overall significant influence on the structure of the food web. In

    a study of the guild structure of fishes in Puget Sound (USA), based on the diets of 21 species, the

    individuals were separated into large and small fish, when data were available for both size groups,

    and according to the season of sampling, i.e. autumn, summer and winter (Reum and Essington,

    2008). That dietary study had the great advantage of identifying statistically the various groups of

    predators that consume similar prey, through using the permutation-based SIMPROF test (Clarke

    et al., 2008), which does not assume any a priori hypotheses as to which predators form a guild. In

    the context of time of year, that study found no evidence that the structure of the overall food web

    changed with season, which is consistent with the conclusions drawn from comparable detailed

    studies of fish communities on the upper shelf of south-eastern Australia and the mid-slope of

    southern Tasmania (Bulman et al., 2001; 2002).

    The initial aim of this study was to produce a food web that illustrates the relationships

    between the abundant demersal fish species and their prey on the lower west coast of Australia,

    through employing the detailed quantitative dietary data that were derived from analyses of the gut

    contents of those species in samples covering a wide size range of each species and each season

    (Table 1). It soon became apparent that, as in numerous other studies, traditional approaches would

    yield a complex food web that was not readily comprehensible and thus of immediate value to

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    managers and ecologists. We thus used an innovative multivariate approach, which involved the use

    of SIMPROF, to identify statistically the various predator and prey guilds and thereby reduce, to a

    manageable level, the number of groups required for constructing the food web. This approach,

    which is still based on sound quantitative data and a series of objective statistical hypothesis tests,

    enabled us to produce a food web in the form of a readily interpretable ‘shade plot’ that reveals the

    magnitude of the trophic relationships between the fish predators and their prey.

    1. Materials and methods

    1.1. Sampling of fish and treatment of gut samples

    The 35 demersal fish species, whose dietary data were used in the current study (Table 1),

    were collected from coastal marine waters along the lower west coast of Australia between Lancelin

    at ca 33°00 S and Cape Naturaliste at ca 33°30 S and in which these species are abundant. Each

    species was sampled by one or more of the following methods: otter trawling, rod and line fishing,

    long lining, gill netting, seine netting and spear fishing. The fish were placed on ice immediately

    after capture and the whole fish, or the carcass and gut contents when the fish had been filleted,

    were transported to the laboratory where they were frozen. The total length (TL) of each fish was

    measured to the nearest 1 mm and, when the gut contained food, it was removed and placed in 70%

    ethanol, except in the case of the larger guts which were first fixed in 10% formalin.

    The dietary items in the guts of each fish were examined under a dissecting microscope and

    identified to the highest taxonomic separation possible. A total of 468 different taxa were identified

    in the gut contents of the 35 fish species. The percentage volumetric contribution of each dietary

    taxon to the total volume of the stomach and/or intestinal contents (%V) was estimated visually

    (Hynes, 1950; Hyslop, 1980). Unidentifiable material was not included in the analyses.

    2.2. Structure of data

    The dietary data, date of capture and total length of each individual of the 35 fish species

    were entered into a common database. As most of the dietary items typically were not able to be

    identified to species or genus, and frequently not to family, the dietary data for each individual were

    aggregated to a higher taxonomic level, usually order. The total number of orders or other higher

    taxa (47), subsequently referred to as prey taxa, was considered both manageable and appropriate

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    for retaining important information on the relationships between the dietary composition of each

    species and its body size and time of year of capture.

    The date of capture of each fish was assigned to the appropriate season, i.e. summer

    (December to February), autumn (March to May), winter (June to August) or spring (September to

    November). Length class intervals of 100 mm TL were chosen for all species, as they provided a

    sufficient but not excessive number of guts for each length class interval of each species to facilitate

    comparability in statistical analyses that involved intra- and inter-specific data for dietary

    compositions. Total length classes in mm are as follows. 1 =

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    estimates of the species x length class group structuring; not to mention producing an unwieldy and

    unreliable table of results. (4) Furthermore, the inclusion of season as a component of the trophic

    guild structure, i.e. predator groups which have the same species at the same length in different

    predator guilds, would increase markedly the complexity of the plots of the relationships between

    the predators and their prey and thus reduce the effectiveness of the plots as a management tool for

    deciding conservation methods etc. for key predators and their prey. The decision to exclude season

    is consistent with the fact that, in detailed studies, the overall dietary composition of the fish

    communities of Puget Sound (USA), the upper shelf of south-eastern Australia and the mid-slope of

    southern Tasmania (Australia) did not change with season (Reum and Essington, 1988; Bulman

    et al., 2001; 2002).

    It is reiterated that every attempt was made to obtain dietary data for a length class of each

    species from each season. If prey taxa are therefore important to a certain species x length class

    group (predator guild) during a particular season, the seasonal effect will still constitute part of the

    analysis determining that guild. Thus, the aim is to average the seasonal effects for good

    management reasons, rather than ignoring them, and thus ultimately to produce a more robust and

    parsimonious description of the food web.

    2.3. Initial screening of dietary data

    The data for all length class by season combinations for the 35 fish species, which contained

    at least three replicate fish, were extracted from the common database. As the number of replicates

    for each length class by season combination for each species varied greatly, the data set was

    unbalanced. The dietary data were therefore subjected to the following iterative process to explore

    whether this imbalance would influence the results. The volumetric contributions of the dietary

    items to each length class by season combination for each species were square root transformed and

    the resultant data employed to create a Bray-Curtis similarity matrix. A ‘distance among centroids’

    matrix was calculated in PERMANOVA+ (Anderson et al., 2008), namely the distances between

    the centres of gravity of selected groups of points within the full-dimensional ‘Bray Curtis space’,

    in which points are located so that their inter-point distances (Euclidean) equate to Bray-Curtis

    dissimilarities in the original space of the transformed data matrix. These selected groups

    correspond to fish from each length class by season combination for each species.

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    It can be argued that this ‘distances among centroids’ matrix is the optimal description of the

    mean relationships among the dietary compositions of these groups. However, this matrix does have

    the significant disadvantage that it loses the link to the original scale of measurement of the data

    matrix, and is therefore not amenable to the subsequent, objective approach of defining higher-level

    group structures within both the predator and prey taxa, using the SIMPROF routine (Clarke et al.,

    2008) - see below. An alternative, which retains this especially important link, is to average the

    (transformed) data matrix itself into these same groups of fish species by length class by season, but

    this may have the potential to distort the true inter-group relationships because of the unbalanced

    group sizes. This is a result of the well-known ‘species accumulation’ effect, in which averages

    from larger numbers of replicates are likely to contain more species (here, prey taxa) and thus

    artefactually generate additional dissimilarity between groups of different sizes. In order to examine

    whether such distortion exists in this case, a simple model matrix was created using Euclidean

    distances between the numbers of replicates in each group. From the RELATE routine in PRIMER

    v6 (Clarke and Gorley, 2006), a Spearman correlation ρ was first calculated between this model

    matrix and the Bray-Curtis dissimilarities computed from the averages of the square root

    transformed dietary data for each group. A very weak relationship here (ρ < 0.2) is considered to

    indicate that the lack of balance in the numbers of replicates making up the averages was potentially

    not a confounding factor for subsequent analyses. As the first RELATE value exceeded 0.2, the

    original data matrix was therefore re-examined to identify, for each species, any length class by

    season combinations (groups) that contained only a small number (n) of replicates. Such

    combinations were successively removed (n < 4, n < 5, etc) until the RELATE ρ value fell below

    the designated threshold of 0.2.

    In conjunction with the above threshold, the RELATE ρ statistic was then calculated

    between the optimal ‘distances among centroids matrix’ and the Bray-Curtis dissimilarities based

    on simple averaging of the transformed data, with a Spearman correlation approaching 0.9

    considered to indicate a high degree of conformity between the information in these two matrices.

    These combined criteria were satisfied by retaining, for every species, all length class by season

    combinations that contained at least six replicates, the resulting RELATE correlations (ρ) between

    centroid and average matrices then being 0.88, whilst the average and count matrices were

    correlated at only the 0.19 level and the centroid and count matrices at only the 0.18 level.

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    For the retained species by length class by season combinations, a Bray-Curtis matrix was

    produced from the square-root transformed dietary volumetric data for all replicates in each

    combination. This matrix was then subjected to a series of two-way crossed ANOSIM tests (Clarke,

    1993), in which one factor (e.g. predator species) was crossed with the combined levels of the two

    remaining factors (e.g. length class and season), thus removing the confounding effects of the latter.

    This analysis was carried out separately for each of the three factors, removing the effects of the

    other two, and the resultant global average R values were used to rank the factors in order of

    importance in determining the assemblage of prey items in the diets. The factor found to be of least

    importance, i.e. season, was ignored for subsequent analysis (see previous section for full rationale

    for this exclusion) and thus the resulting calculations employed 112 combinations of species and

    their length classes. This strengthened the number of replicates constituting each group, and the

    results of re-analysis of the relationships between centroid and averaged matrices, i.e. ρ = 0.92, and

    their relationship to sample size, i.e. ρ = 0.12 and ρ = 0.17, respectively, reinforced the validity of

    working with the averaged matrix in the subsequent analyses.

    2.4. Identification of predator guilds

    The dietary compositions for the various species x 100 mm length class combinations for the

    35 fish species were then grouped statistically into predator guilds, using an objective form of

    cluster analysis. Specifically, the Bray-Curtis similarities from the above 112 group averages of

    volumetric dietary data, now regarded as the ‘samples’ and considered to be effectively free from

    sample-size bias, were subjected to hierarchical (Q-mode) cluster analysis using group-average

    linking, and tested using the SIMPROF routine in PRIMER v6 (Clarke and Gorley, 2006; Clarke

    et al., 2008). SIMPROF provides an objective means of defining, from the cluster dendrogram, the

    sets of species x length-class combinations for which there is no evidence of the samples within

    each set having any multivariate structure (e.g. further meaningful clustering of samples). This is

    achieved by a hierarchical series of tests on the nodes of the dendrogram, progressing down the tree

    to a finer level of classification of samples within a set only when there is evidence of remaining

    multivariate structure. These SIMPROF sets therefore defined the ‘trophic guilds’ of predators, each

    guild constituting different species and/or length-class combinations, such that similar diets are

    found within each set, and are significantly different from those in other sets.

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    A few of the resulting sets were outliers and, as they contained insufficient information for

    credible inclusion in the ensuing guild analyses (e.g. they consisted of only one length class of one

    species, and a low number of dietary samples), they were excluded from further consideration (see

    Results). The relationships between the remaining 14 predator guilds were then examined in the

    following two ways. Firstly, the Bray-Curtis resemblance matrix among samples (averaged data for

    each predator species by length class combination) was input to a SIMPER analysis in PRIMER v6

    (Clarke, 1993; Clarke and Gorley, 2006) giving, for each guild, the percentage contributions that

    prey taxa made to the average within-guild similarity. From the full SIMPER tables, the prey taxa

    principally typifying each predator guild were extracted.

    Secondly, the same Bray-Curtis similarities were used to construct a ‘distances among

    centroids’ matrix among the 14 predator guilds, using the PERMANOVA+ routine (Anderson et al.,

    2008). A 2-dimensional non-metric MDS plot of the relationships among these 14 centroids was

    then employed to display the gradient structure of trophic relationships among those various guilds.

    Subsequently, summary measures, such as the number of predator species by length class

    combinations making up each trophic guild, the total number of guts examined for these groups,

    and the values for Simpson diversity of the average prey assemblage for each guild were displayed

    as bubble plots on the 2-d nMDS ordination plot. The significance and extent to which the dietary

    relationships amongst predator guilds are mirrored in Simpson evenness was quantified by the

    RELATE routine (Clarke and Gorley, 2006), which, in this case, is a Spearman matrix correlation

    between dietary Bray-Curtis dissimilarities and (Euclidean) distances between the values for

    Simpson diversity, tested by permutation.

    The main axis of the MDS ordination of predator guilds was also identified. Since axis

    orientations are essentially arbitrary in MDS, this is defined as the first axis of a principal

    component analysis of the 2-d MDS points, displayed in this case in the vertical direction, following

    the usual convention for displaying hierarchies or gradients, with the guilds containing the largest

    predators at the top of the plot.

    2.5. Identification of prey guilds

    The next step again involved SIMPROF, but this time to delineate each group of prey taxa (prey

    guilds) within which the relative contributions to the diets of the trophic (predator) guilds were

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    similar. Therefore, after cluster analysis of the species x length class combinations and the

    subsequent deletion of three outlying predator guilds, 44 of the original 47 prey taxa remain (see

    Results, Fig. 1), as the three other prey taxa only occurred in the deleted predator guilds. A ‘species

    resemblance’ matrix (Clarke and Warwick, 2001) can be defined between every pair of these prey

    taxa by standardising the averaged data matrix (of 44 prey taxa by 14 predator guilds) over the

    predator guilds, for each prey category (so that the values for each prey taxa sum to 100 over all

    predator guilds), and then calculating Bray-Curtis similarities between prey taxa. (Note that this

    method can be alternatively, and entirely equivalently described, as calculating Whittaker's Index of

    Association (Whittaker, 1952) on the species of the original (unstandardised) matrix.) The resulting

    resemblances reflect the viewpoint of the prey; i.e. what is the percentage breakdown of each prey

    taxa across the predator guilds that consume it, and how similar are those percentage breakdowns

    for the 44 different prey taxa? This species resemblance matrix was subjected to group-average

    linked clustering (R-mode) in a manner similar to that used for the predator guilds (see earlier). In

    conjunction with the cluster analysis, a further run of the SIMPROF routine (Clarke et al., 2008)

    yields an objective grouping of the 44 prey taxa into ‘prey guilds’ (see Results for further details).

    Prey taxa within each such guild are those for which the null hypothesis of indistinguishability in

    their breakdown of percentage composition across the predator guilds cannot be rejected. Note that

    such ‘species SIMPROF tests’ can be undertaken in PRIMER v6 but not straightforwardly, because

    the default SIMPROF permutation procedure is not designed to carry out this novel analysis and

    will permute the data matrix incorrectly. It thus requires temporary switching of the definition of

    ‘samples’ and ‘variables’ to obtain the correct permutation distributions (Somerfield and Clarke,

    2011).

    The resemblance matrix used for the cluster analysis of the prey taxa was then employed, as

    described earlier for the predator guilds, to produce a nMDS plot of the ‘distances among centroids’

    for the prey guilds and to determine the main axis of this plot. The common pattern of predation

    within each prey guild is then illustrated by simple line plots showing the percentage consumption

    of each prey taxa by each of the 14 predator guilds, with the predator and prey guilds each arranged

    as in their order on the main axis of their respective nMDS ordination plots.

    2.6. Food webs

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    A food web that linked the 44 prey taxa to the 112 predator species x length class

    combinations would clearly be so complex that it would be uninformative. It is realistic, however,

    to produce a web relating the ten prey guilds to the 14 predator guilds. For this purpose, the

    volumetric percentage contributions of each prey taxa in a given prey guild are simply added, and

    the resultant values averaged across all species x length class combinations in each of the predator

    guilds. This enables a table to be constructed that provides the volumetric contribution of each prey

    guild to the diet of a ‘typical’ member of each predator guild. These data were then square-root

    transformed and rescaled so that, in an appropriate and clear visual manner, the lines linking the

    various predator and prey guilds varied linearly in thickness on a food web plot in proportion to the

    magnitude of the trophic interactions between those guilds.

    Although the above food web comprises only cross-links between two discrete sets of

    objects, i.e. predator guild and prey guild, and no internal links within those guilds, it is still very

    complex. A more helpful and readily comprehensible representation of the relationships between

    the predator and prey guilds is a ‘shade plot’, which uses the same square-root transformed

    volumetric dietary data as employed for the above food web, but with rows and columns

    representing the prey and predator guilds, respectively, and the depth of shading in each cell of this

    two-way layout being linearly related on a continuous scale to the strength of the trophic interaction

    in this second simpler food web.

    The sequence of the predator and prey guilds in both the traditional food web and the food

    web displayed as a shade plot follow those designated by their respective positions along the main

    axis (vertical alignment) in their respective nMDS ordination plots (see earlier).

    3. Results

    3.1. Identifying predator guilds and their typifying prey species

    The cluster dendrogram, derived from the Bray-Curtis similarity matrix constructed from the

    volumetric dietary data for the length classes of each species, is shown in Fig. 1. Subjecting these

    dietary data to SIMPROF separated the 112 species x length class combinations into 17 predator

    guilds, designated as A to Q, which were significantly different from each other using a sequence of

    P < 5% level tests, among which there were four outliers (Fig. 1). Although one of the outliers

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    (guild K) comprised a single species x length class combination, it contained as many as 37

    replicates and was therefore considered a bona fide guild and thus retained for subsequent analyses.

    The three other outliers (guilds A, C and J) each contained only one species x length class

    combination and few replicates and were thus not included in subsequent analyses. There was thus

    data for a total of 14 predator guilds for analysis.

    On the ordination plot, derived from the volumetric dietary data for the above 14 predator

    guilds, the points for those guilds followed a broadly downward progression from B at the top to I

    at the bottom (Fig. 2). Major artefactual effects on this plot can be ruled out for the following

    reasons. The number of species by length class combinations in each predator guild, as reflected in

    the relative sizes of the bubbles for each guild in Fig. 3a, showed no overall tendency to change

    consistently with its position on that ordination plot. Similarly, there was no evidence that the total

    number of guts examined for dietary analyses varied with position on the same ordination plot

    (Fig. 3b). Thus, in keeping with the earlier RELATE tests (see the Methods section 2.3. on Initial

    Screening of Dietary Data), the order in which the predator guilds are distributed in the vertical axis

    in Fig. 2 is related neither to the number of species by length class groups in each predator guild nor

    to the number of individual guts in those guilds.

    The vertical sequence of the 14 predator guilds in Fig. 2 is given in Table 2, commencing

    with guild B and ending with predator guild I. This sequence progresses from the larger individuals

    of the larger species, such as the teleosts Epinephelides armatus and Glaucosoma hebraicum and

    the elasmobranchs Heterodontus portusjacksoni and Squatina australis (predator guilds B and D),

    to the smallest individuals of four sillaginid species (predator guild O) and to smaller individuals of

    Pseudocaranx georgianus and the small species Ammotretis elongatus (predator guild I).

    The use of SIMPER demonstrated that the typifying prey taxa of the guilds at the top of

    Table 2 (B, D and E) comprise the largest prey, i.e. teleosts and other decapods (mainly brachyuran

    crabs), whereas those of predator guilds at the bottom of that table comprise the smaller prey, such

    as cumaceans, amphipods and mysids. The data in Table 2 also emphasise that the predator guild of

    the larger species can change markedly and progressively with increasing body size. This

    phenomenon is exemplified by Pseudocaranx georgianus, with its predator guild shifting from I for

    its smaller individuals, to F, near the top for its largest individuals (Table 2). Bubbles, whose sizes

    represent the magnitude of the values for Simpson’s Diversity Index, were superimposed on the

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    points for the predator guilds in the ordination plot shown in Fig. 2 (Fig. 3c). The trends exhibited

    by bubble size demonstrated that the diets were less diverse for predator guilds in the upper part of

    the plot (B, D, E and F), which represented the larger individuals of the larger fish species, than for

    all of those in the lower part of the plot and sometimes markedly so (guilds I, N, L and K) and

    which represented the smaller individuals of large species and the smaller fish species. The apparent

    pattern of increase in bubble size from top to bottom of the ordination plot is statistically established

    by the RELATE test between the (Bray-Curtis) resemblance matrix for diets of the predator guilds

    and the (Euclidean) distances between Simpson diversity values, which gives a matrix correlation of

    ρ = 0.32, P < 1%.

    3.2. Identifying prey guilds and their relationships to predator guilds

    Cluster analysis of the volumetric contribution of each prey taxon to the diets of each

    predator guild, expressed as a percentage of the total volumetric consumption of that prey taxon by

    all predator guilds collectively, allied with the use of SIMPROF, yielded 12 groups (a-l) whose

    compositions were significantly different from each other in a series of 5% level tests (Fig. 4).

    Some prey guilds comprised relatively similar types of prey. For example, all groups of insects

    were located in prey guild c, all cephalopods and teleosts in guild g, and guild l contained one

    cluster comprising small epibenthic crustaceans, e.g. cumaceans, amphipods and mysids etc., and

    another the two main groups of polychaetes, i.e. Errantia and Sedentaria (Fig. 4).

    On the centroid ordination plot, derived from the same data as employed for the above

    cluster analysis, the points for prey guilds e, f, d and g lie at the top, those for h, j, k and l in the

    middle and those for i, c and b at the bottom, with prey guild a lying far to the left (Fig. 5). At one

    extreme, prey guilds e, f and d comprised the largest of the sedentary prey that were consumed by

    the 35 fish species, e.g. spatangoid echinoderms and archaeogastropod and mytiloid molluscs,

    whereas, at the other extreme, prey guilds i, c and b comprised small planktonic crustaceans and

    insect larvae.

    The patterns displayed by the line plots in Fig. 6 emphasise that the relationships between

    the percentage consumption of each prey taxon within each prey guild are similar. Thus, the prey

    taxa in prey guilds e and f were consumed very largely only by one or both of predator guilds E and

    F, whereas those in prey guilds c and b were ingested almost exclusively by one or both of predator

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    guilds G and K, which, in these cases, comprised the small individuals of sillaginid species and the

    small species Atherinomorus ogilbyi and Spratelloides robustus (Table 2, Fig. 6). In contrast, prey

    guild l was consumed by a wide range of predator guilds.

    3.3. Food webs

    Some trophic interactions can be clearly identified between certain predator and prey guilds

    in the food web shown in Fig. 7, and particularly at the top and bottom of that web. Thus, for

    example, the thickness of the lines relating predator guild B with the various prey guilds emphasise

    that the members of this guild feed predominantly on prey guild g and likewise the members of

    predator guild I feed largely on members of prey guild l. The trophic relationships are far more

    difficult to detect, however, in the middle part of the food web, where there is extensive criss-

    crossing of lines between many of the predator and prey guilds (Fig. 7).

    The depth of the shading for the relationship between each predator guild and prey guild in

    the shade plot shown in Fig. 8 reflects the magnitude of the interaction between those two guilds,

    with the predator and prey guilds each being arranged in the sequences designated by the results of

    the ordinations described earlier and shown in Figs 2 and 5, respectively. The trends emphasise that

    the extent of the interaction between the prey guilds and the predator guilds broadly shifts in a

    diagonal direction from top left to bottom right of the plot. Fig. 8 also illustrates very clearly that

    some prey, such as those belonging to g and l, are consumed by the members of all predator guilds,

    whereas others, such as those representing e, f and a, are ingested by only one or two predator

    guilds. Furthermore, prey guilds h and k are fed on by predators in the centre of the hierarchy. The

    plot also emphasises that predator guilds such as B and I fed on only three prey guilds, whereas, at

    the other extreme, predator guild P fed on a wide spectrum of prey guilds (Fig. 8).

    4. Discussion

    4.1. Relationships between predator guilds and prey taxa

    This study has used a range of statistical analyses and approaches to develop a food web that

    can readily be used by scientists and managers to understand the strengths of the relationships

    between a suite of abundant demersal fish predators and their prey in a coastal ecosystem. The

    construction of this sound food web was facilitated by the availability of comprehensive

    quantitative dietary data for a wide size range of 35 demersal fish species caught seasonally on the

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    lower west coast of Australia. The employment of the recently-developed SIMPROF technique

    (Clarke et al., 2008) enabled the predator and prey guilds to be identified statistically and without

    any a priori hypotheses, with the prey guilds being identified using an innovative version of this

    SIMPROF test. The use of nMDS ordination enabled the hierarchical structure of both the predator

    and prey guilds to be determined objectively and thus facilitate the matching of the components of

    those two hierarchies in the form of a shade plot, which illustrates, in an effective and visual

    manner, the magnitudes of the relationships between each predator guild and prey guild. It is

    recognised that this shade plot focuses on those relationships and does not incorporate data for

    lower levels in the food web, i.e. the relationships between primary consumers and primary

    producers.

    The statistical identification of those fish species x length class combinations, whose diets

    were similar and differed from other such combinations, reduced the number of such combinations

    in the data matrix (112) to a far more manageable number of predator guilds (14), while retaining

    the resolution required for making meaningful dietary comparisons. The construction of these

    predator guilds was thus not subjective and avoided the ad hoc methods, which, as pointed out by

    Luczkovich et al. (2002), have frequently been used to aggregate predators into trophic guilds.

    While the type of boot-strapping approach developed by Jaksic and Medel (1990), and used by

    Garrison and Link (2000) in their dietary studies, also provides an objective method for

    distinguishing between dietary groups, it produces only a single cut-off for the full data set, whereas

    the use of cluster analysis with SIMPROF has the advantage of testing for significance between the

    different species x length class combinations that represent the various nodes within the

    dendrogram.

    It was particularly notable that, when the centroids of the dietary data for the predator guilds

    were subjected to nMDS ordination, the main axis of those guilds was aligned on the ordination plot

    from the larger individuals of the largest fish species at one extreme and the smaller individuals of

    the larger species and all of those of smallest species at the other. When that main axis was aligned

    to the vertical, the composition of the prey changed progressively from those of the larger predators

    at the top of the plot to those of the smaller predators at the bottom of the plot, thereby constituting

    a trophic hierarchy. The larger individuals of the fish predators tended to feed predominantly on

    other teleosts and other large prey, such as members of the Decapoda, and, in particular, brachyuran

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    crabs, while small fish ingested a wide range of small crustaceans, including amphipods, mysids,

    cumaceans and carideans (see Platell et al., 1997, 1998a,b; 2010; Platell and Potter, 1998, 1999,

    2001; Sommerville et al., 2011; French et al., 2012 for comprehensive dietary data for the separate

    species). This trend was reflected in an increase in the diversity of the diet from the top to the

    bottom of the hierarchy.

    The hierarchical arrangement of the predator guilds, in combination with the distribution of

    the length class groups for each predator species within those guilds, demonstrates that, as several

    species of predator increase in body size, they progress sequentially upwards by at least one guild in

    the trophic hierarchy and sometimes far more (Table 2). A particularly extreme example is provided

    by the carangid Pseudocaranx georgianus, which belongs to predator guild I when small and thus

    feeds mainly on cumaceans and amphipods, and to predator guild F when large and therefore feeds

    predominantly on other decapods (mainly brachyurans) and teleosts. It was also noteworthy that the

    two largest of the six sillaginids, Sillaginodes punctata and Sillago schomburgkii, underwent a

    similar progressive upward shift in the trophic hierarchy from predator guild O when small to guild

    P when of moderate size and finally to Q when large. Thus, the most important typifying prey taxa

    were initially harpacticoid crustaceans, and then amphipod crustaceans and finally sedentary

    polychaetes with the largest individuals (Table 2). These size-related shifts in the main prey taxa of

    large species from one predator guild to one or more further guilds would reduce the potential for

    intra-specific competition for food resources by these species. This conclusion parallels that drawn

    by exploring the trends exhibited by the diets of individual species as they increase in size (Hyndes

    et al., 1997; French et al., 2012), recognising that, in the case of Sillaginodes punctata, such

    competition would also be reduced by the tendency for larger fish to move into deeper waters and

    around reefs (Hyndes et al., 1998), a movement pattern exhibited by numerous fish species.

    In contrast to the above trends, some larger species, such as Myliobatis australis and

    Bodianus frenchii, remained throughout life in the same predator guild (F) and the same was very

    largely true for Pagrus auratus, with the typifying prey species of this guild comprising other

    decapods (mainly brachyurans) and teleosts. This lack of distinction between the predator guilds for

    the various length classes of these large fish species is considered valid because the number of prey

    taxa used was substantial (44). Indeed, that number, although similar to that of a recent compilation

    of dietary data for 76 fishes in north-western Australia (Farmer and Wilson, 2011), was far greater

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    than the 8 and 26 employed in comparable studies by Reum and Essington (2008) and Akin and

    Winemiller (2006), respectively. While it should be recognised that the overall compositions of the

    diets of these species did change with increasing body size when using a finer taxonomic scale

    (Platell et al., 2010; Sommerville et al., 2011; French et al., 2012), the use of those finer taxonomic

    scales for the dietary categories in the present study would have produced a prohibitively large

    number of predator guilds for the analyses employed in the current study and thus mitigated against

    the construction of a readily comprehensible food web.

    4.2. Food webs, including identification and characteristics of prey guilds

    Until now, the discussion has largely focused on how food resources are partitioned among

    demersal fish species on the lower west coast of Australia, taking into account the size of the fish.

    The emphasis now shifts to exploring the ways in which food resources are shared among the

    various fish predator guilds. This was achieved by identifying the various groups of prey taxa,

    which had each been shown statistically to share common patterns of predation across one or more

    predator guilds. This was achieved by using a novel ‘switching’ approach within SIMPROF

    (R-mode analysis), which had the great advantage of reducing the number of 47 prey taxa in the

    present study to a far more manageable number of prey guilds (12), thereby paralleling the benefits

    of using SIMPROF to identify predator guilds (see above).

    The prey taxa within each prey guild, which were objectively identified by the use of cluster

    analysis with SIMPROF, showed a strong tendency to represent suites of prey with common

    distinctive ecological/functional characteristics. For example, all cephalopod and teleost prey,

    which are relatively large and mobile, are located in prey guild g, whereas prey guild b contained all

    of the very small planktonic crustaceans, represented by the Notostraca, Calanoida and Cladocera.

    Furthermore, the ‘largest’ of the prey guilds (l) comprised small benthic and epibenthic crustaceans

    and the errant and sedentary polychaetes, which are not particularly mobile and live on or within the

    substratum. Within prey guild f, the molluscs (mytiloids, mesogastropods, arcoids) and

    echinoderms (clypeasteroids) are relatively large and immobile, and cirripedes and leptostracans are

    amongst a multitude of taxa that live in or on structures created by mytiloids (e.g. Cinar et al., 2008;

    Galkin and Goroslavskaya, 2008). Prey guild c contained all of the insects, represented by either

    their larvae or adults. The larvae of the insects belonged in particular to the Tipulidae (Hourston

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    et al., 2004), whose pupae possess plastron-bearing spiracular gills and are found in saltwater

    (Hinton, 1967), while the adults were represented by insects, such as those of the Formicidae, which

    alight on the water surface (Hourston et al., 2004). These results emphasise that, in the food web for

    the lower west coast of Australia, the members of each guild of demersal fish predators typically

    feed on prey that occupy a particular ecological niche. There are, however, a few cases where the

    basis for the distribution of taxa among guilds is not clear. For example, it is not evident why

    prosobranchs and cubomedusae are present together in prey guild h, and why opisthobranchs and

    phyrnophiurids occur together in prey guild j, in which they are the sole representatives. These

    pairings are likely to reflect some commonality in terms of ecology or function, but which, due to a

    paucity of data for these groups in south-western Australian waters, are not at present readily

    apparent.

    The conventional food web shown in Fig. 7 emphasises that such webs are still very

    complex, even when, as in that figure, the data for the various predators and prey have been

    aggregated into guilds. Thus, the relationships between these guilds could be clearly identified in

    only a limited number of cases. In contrast, the relationships between predator and prey guilds, and

    their relative magnitudes, as shown by variations in shading, can readily be discerned in the ‘shade

    plot’ in Fig. 8, which matches the predator guilds against the prey guilds, in the hierarchical orders

    determined from the nMDS ordinations shown in Figs 2 and 5, respectively. Thus, the large

    predators at the apex of their trophic hierarchy can be seen to focus particularly on prey near the

    apex of the prey hierarchy, which is towards the top left hand corner of the plot. In contrast, the

    smaller individuals of large species and the smaller species towards the base of the predator

    hierarchy concentrate on consuming prey towards the lower end of the prey hierarchy, which is

    situated towards the lower right hand of the shade plot.

    The trends exhibited by the locations and intensities of shading in Fig. 8 emphasise that

    cephalopods, teleosts and other decapods (prey guild g) are consumed by all predator guilds.

    However, they also demonstrate that these larger, more mobile and/or hard-bodied prey are most

    important as a food source for large species, such as Aptychotrema vincentiana,

    Glaucosoma hebraicum and Heterodontus portusjacksoni and particularly their larger individuals,

    which belong to predator guilds B, D and E at the top of the predator hierarchy. It is also evident

    that the small crustaceans and polychaetes, which live in or on the benthos, belong to the other prey

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    guild (l) that is consumed by all predator guilds. In contrast to the situation with prey guild g,

    however, the members of prey guild l are a far more important food source to predator guilds at the

    bottom of the trophic hierarchy and which include small species such as Lesueurina platycephala,

    Atherinomorus ogilbyi, Pempheris klunzingeri, Lepidotrigla modesta and Ammotretis elongatus and

    the small individuals of larger species such as Pseudocaranx georgianus (M, L, K, N and I).

    Although the larger individuals of the suite of sillaginids (predator guilds Q and P) lie in the middle

    of the predator guild hierarchy and feed on cephalopods, teleosts and decapods (prey guild g) and to

    a greater extent small benthic crustaceans and polychaetes (prey guild l), they are distinguished

    from other predator guilds by consuming a substantial collective volume of gastropods, small

    bivalves and brittle stars (prey guilds h, j and k). Thus, while two prey guilds are consumed by all

    predator guilds, the other prey guilds are typically ingested by at least three other predator guilds.

    The food resources are consequently spread among and within the demersal fish species on the

    lower west coast, thereby reducing the potential for inter- and intra-specific competition.

    The production of a food web in the form of a shade plot, as shown in Fig. 8, will allow

    managers and scientists to be able readily to visualise the trophic relationships between the main

    commercial and recreational species and their prey and the magnitudes of those relationships. A

    graphical representation of this form is particularly effective (compared with a table) in assimilating

    the broad structure of predator-prey relationships and highlighting the major prey in the diets of the

    various predator groups. This in turn will allow the key trophic links in the ecosystem to be

    identified and thereby enable the effects of any perturbations in those relationships to be predicted.

    Conversely, the influence of anthropogenic and other activities on a given fish species can be

    predicted, when such activities are known clearly to have an effect on the abundances of the key

    prey of that species. This would be especially important in the case of fish species that were

    particularly selective in their choice of prey.

    Acknowledgements

    Our gratitude is expressed to Kris Parker for help with formatting the dietary database and to the

    numerous research students and postdoctoral fellows at Murdoch University who contributed to the

    dietary studies that provided the data used for analyses during the current investigation. Financial

    support was provided by the Western Australian Marine Science Initiative, the Australian Fisheries

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    Research and Development Corporation and Murdoch University. Ben French was the recipient of a

    Murdoch University PhD scholarship. Bob Clarke acknowledges his Adjunct Professorship at

    Murdoch University and Honorary Research Fellowship at the Plymouth Marine Laboratory. The

    authors are grateful to three anonymous referees for their thorough reviews and many suggestions

    for improvements.

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    List of Figures

    Figure 1 ‘Q-mode’ cluster dendrogram, derived from the Bray-Curtis similarity matrix constructed

    from the volumetric dietary data for the length classes of each fish species for which there were

    such data. The thick lines designate the species x length class combinations that were separated by

    SIMPROF into a series of groups (predator guilds) whose dietary compositions differed. Note that

    three of the four outliers (A, C and J) contained a single species x length class combination and

    were not included in further analysis (see text for full rationale). Full generic names for each fish

    species are provided in Table 2.

    Figure 2 Centroid nMDS ordination plots of predator guilds, derived from a Bray-Curtis matrix of

    the volumetric contributions of the prey taxa to each ‘sample’ (species x length class combination)

    within the various predator guilds. Length classes are grouped in 100 mm TL intervals from

    1 =

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    Figure 6 Line plots showing the pattern of consumption of each prey taxon, relative to its total

    consumption, across the 14 predator guilds. The predator and prey guilds are both listed according

    to their order on the vertical axes of their respective nMDS ordination plots (see Figs 2 and 5).

    Figure 7 Traditional food web showing the trophic linkages between the predator and prey guilds.

    The thickness of the links represent the relative strengths of the relationships.

    Figure 8 A shade plot showing the relative magnitudes of the trophic linkages between the predator

    and prey guilds, with the total consumption of all members of prey guild ‘x’ making up percentage

    p of the diet of the average member of predator guild ‘X’, where the strength of the grey shading

    represents the value of p (see shade legend, lower left), ranging from p=0 (white) to p=100%

    (black). Note that those cells with only slight shading are delineated by faint grey lines.

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    Table 1 The 35 demersal fish species whose diets were used to explore the trophic relationships between fish species and their prey on the lower west coast of Australia, together with the relevant publications or data sources.

    Families Species Publications

    Elasmobranchs Heterodontidae Heterodontus portusjacksoni Sommerville et al. (2011) Myliobatidae Myliobatis australis Sommerville et al. (2011) Rhinobatidae Aptychotrema vincentiana Sommerville et al. (2011) Squatinidae Squatina australis Sommerville et al. (2011) Urolophidae Trygonoptera mucosa Platell et al. (1998a)

    Trygonoptera personata Platell et al. (1998a) Urolophus lobatus Platell et al. (1998a) Urolophus paucimaculatus Platell et al. (1998a) Teleosts

    Atherinidae Atherinomorus ogilbyi Hourston et al. (2004) Carangidae Pseudocaranx georgianus French et al. (2012) Pseudocaranx wrighti Platell et al. (1997) Clupeidae Spratelloides robustus Schafer et al. (2002) Gerreidae Parequula melbournensis Platell et al. (1997) Glaucosomatidae Glaucosoma hebraicum Platell et al. (2010) Labridae Bodianus frenchii Platell et al. (2010) Leptoscopidae Lesueurina platycephala Hourston et al. (2004) Mullidae Upeneichthys lineatus Platell et al. (1998b) Upeneichthys stotti Platell et al. (1998b) Pempherididae Parapriacanthus elongatus Platell and Potter (1999) Pempheris klunzingeri Platell and Potter (1999) Platycephalidae Platycephalus longispinis Platell and Potter (1998) Pleuronectidae Ammotretis elongatus Hourston et al. (2004) Pseudorhombus jenynsii Schafer et al. (2002) Scorpaenidae Maxillicosta scabriceps Platell and Potter (1998) Serranidae Epinephelides armatus Platell et al. (2010) Sillaginidae Sillaginodes punctata Hyndes et al. (1997)

    and Platell (unpublished data) Sillago burrus Hyndes et al. (1997) Sillago robusta Hyndes et al. (1997) Sillago schomburgkii Hourston et al. (2004) Sillago vittata Hyndes et al. (1997) Sillago bassensis Hyndes et al. (1997) Sparidae Pagrus auratus French et al. (2012) Rhabdosargus sarba Ang (unpublished data) Triglidae Lepidotrigla modesta Platell and Potter (1999)

    Lepidotrigla papilio Platell and Potter (1999)

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    Table 2 The predator guilds identified among the 35 demersal fish species by SIMPROF, together with their typifying prey taxa and the percentage contributions made by each of those categories to the average similarity of the dietary composition of each predator guild (as identified by SIMPER). Note that each predator guild comprises groups of species x length class combinations. Length classes in mm are as follows. 1 = < 100, 2 = 100-199, 3 = 200-299, 4 = 300-399, 5 = 400-499, 6 = 500-599, 7 = 600-699, 8 = 700-799, 9 = 800-899 and 10 = 900-999.

    Predator species

    Length class (mm)

    Predator guild

    Prey taxa Percentage similarity

    contribution

    Aptychotrema vincentiana 10 Teleostei 97 Epinephelides armatus 3-5 Glaucosoma hebraicum 4,7-9 Heterodontus portusjacksoni 3,9 Squatina australis 3-10

    B

    Aptychotrema vincentiana 8,9 Teleostei 62 Epinephelides armatus 2 Other Decapoda 37 Heterodontus portusjacksoni 4,10

    D

    Pagrus auratus 6 Teleostei 67 Glaucosoma hebraicum 5,6

    E Other Decapoda 22

    Aptychotrema vincentiana 3-7 Other Decapoda 67 Bodianus frenchii 2-5 Teleostei 18 Glaucosoma hebraicum 1,2 Heterodontus portusjacksoni 7 Maxillicosta scabriceps 1,2 Myliobatis australis 2-5,7 Pagrus auratus 1-3,7-9 Platycephalus longispinis 2,3 Pseudocaranx georgianus 3-5 Pseudorhombus jenynsii 1,2 Rhabdosargus sarba 2 Upeneichthys lineatus 3

    F

    Sillaginodes punctata 4 Sedentaria 40 Sillago bassensis 3 Errantia 31 Sillago burrus 2,3 Sillago schomburgkii 4 Sillago vittata 2,3

    Trygonoptera mucosa 2-4

    Q

    Pseudocaranx wrighti 1,2 Other Decapoda

    37 Rhabdosargus sarba 3 Amphipoda 23

    Upeneichthys lineatus 2

    H

    Tanaidacea 20

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    Table 2 continued.

    Predator species Length

    class (mm) Predator

    guild Prey taxa

    Percentage similarity

    contribution

    Parequula melbournensis 1,2 Amphipoda 40 Sillaginodes punctata 2,3 Errantia 31 Sillago bassensis 2 Sillago robusta 2 Sillago schomburgkii

    2,3

    P

    Atherinomorus ogilbyi 1 Calanoida 69 Sillago bassensis 1 Amphipoda 14 Spratelloides robustus 1

    G

    Cladocera 11

    Sillaginodes punctata 1 Harpacticoida 48 Sillago burrus 1 Errantia 19 Sillago schomburgkii 1 Amphipoda 16 Sillago vittata 1

    O

    Lesueurina platycephala 1 Amphipoda 39 Upeneichthys stotti 2 Mysidacea 21 Cumacea 14

    M

    Isopoda 12

    Trygonoptera personata 2,3 Errantia 25 Urolophus paucimaculatus 3 Amphipoda 20 Caridea 19 Sedentaria 14

    L

    Mysidacea 13

    Atherinomorus ogilbyi 2 K Amphipoda 85

    Lepidotrigla modesta 1,2 Mysidacea 31 Lepidotrigla papilio 1,2 Amphipoda 27 Parapriacanthus elongatus 1,2 Cumacea 14 Pempheris klunzingeri 1,2 Caridea 11

    Urolophus lobatus 2,3 Urolophus paucimaculatus 2

    N

    Ammotretis elongatus 1 Cumacea 56 Pseudocaranx georgianus 2

    I Amphipoda 44

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    Glaucosoma hebraicum 4

    Epinephelides armatus 4

    Squatina australis 3

    Epinephelides armatus 5

    Glaucosoma hebraicum 8

    Squatina australis 8

    Squatina australis 4

    Squatina australis 10

    Glaucosoma hebraicum 7

    Aptychotrema vincentiana 10

    Epinephelides armatus 3

    Heterodontus portusjacksoni 3

    Glaucosoma hebraicum 9

    Squatina australis 7

    Squatina australis 6

    Squatina australis 5

    Heterodontus portusjacksoni 9

    Squatina australis 9

    Pseudocaranx georgianus 6

    Aptychotrema vincentiana 9

    Heterodontus portusjacksoni 10

    Heterodontus portusjacksoni 4

    Aptychotrema vincentiana 8

    Epinephelides armatus 2

    Glaucosoma hebraicum 6

    Pagrus auratus 6

    Glaucosoma hebraicum 5

    Pagrus auratus 7

    Pagrus auratus 2

    Pagrus auratus 3

    Glaucosoma hebraicum 1

    Glaucosoma hebraicum 2

    Myliobatis australis 2

    Maxillicosta scabriceps 1

    Maxillicosta scabriceps 2

    Upeneichthys lineatus 3

    Platycephalus longispinis 2

    Pseudorhombus jenynsii 1

    Pseudocaranx georgianus 4

    Platycephalus longispinis 3

    Pseudorhombus jenynsii 2

    Pagrus auratus 1

    Pseudocaranx georgianus 3

    Upeneichthys lineatus 3

    Bodianus frenchii 2

    Bodianus frenchii 5

    Bodianus frenchii 3

    Bodianus frenchii 4

    Rhabdosargus sarba 2

    Myliobatis australis 3

    Myliobatis australis 4

    Aptychotrema vincentiana 3

    Aptychotrema vincentiana 4

    Myliobatis australis 7

    Pagrus auratus 8

    Pseudocaranx georgianus 5

    Heterodontus portusjacksoni 7

    Myliobatis australis 5

    Aptychotrema vincentiana 6

    Aptychotrema vincentiana 7

    Aptychotrema vincentiana 5

    Pagrus auratus 9

    Spratelloides robustus 1

    Atherinomorus ogilbyi 1

    Sillago bassensis 1

    Pseudocaranx wrighti 1

    Pseudocaranx wrighti 2

    Rhabdosargus sarba 3

    Upeneichthys lineatus 2

    Ammotretis elongatus 1

    Pseudocaranx georgianus 2

    Upeneichthys stotti 1

    Atherinomorus ogilbyi 2

    Urolophus paucimaculatus 3

    Trygonoptera personata 2

    Trygonoptera personata 3

    Lesueurina platycephala 1

    Upeneichthys stotti 2

    Pempheris klunzingeri 2

    Urolophus paucimaculatus 2

    Parapriacanthus elongatus 1

    Parapriacanthus elongatus 2

    Pempheris klunzingeri 1

    Urolophus lobatus 2

    Urolophus lobatus 3

    Lepidotrigla modesta 1

    Lepidotrigla modesta 2

    Lepidotrigla papilio 1

    Lepidotrigla papilio 2

    Sillago vittata 1

    Sillaginodes punctata 1

    Sillago burrus 1

    Sillago schomburgkii 1

    Sillago robusta 2

    Sillago bassensis 2

    Sillago schomburgkii 3

    Sillaginodes punctata 3

    Sillaginodes punctata 2

    Sillago schomburgkii 2

    Parequula melbournensis 1

    Parequula melbournensis 2

    Sillaginodes punctata 4

    Sillago schomburgkii 4

    Trygonoptera mucosa 2

    Trygonoptera mucosa 3

    Trygonoptera mucosa 4

    Sillago vittata 2

    Sillago burrus 3

    Sillago burrus 2

    Sillago bassensis 3

    Sillago vittata 3

    100 80 60 40 20 0

    Similarity (%)

    A

    B

    C

    D

    E

    F

    M

    N

    L

    P

    G

    IJ

    H

    K

    O

    Q

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    DE

    B

    F

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    H

    I

    K LN

    M O

    P

    Q

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    (b)

    (a)

    (c)

    DE

    B

    F

    G

    H

    I

    K LN

    M O

    P

    Q

    2

    8

    14

    20

    2D Stress: 0.09

    DE

    F

    I

    KN

    M

    P

    Q

    200

    800

    1400

    2000

    2D Stress: 0.09

    B

    F

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    M O

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    0.02

    0.24

    0.42

    0.80

    2D Stress: 0.09

    DE

    B

    H

    G

    LO

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    Other Insecta

    100 80 60 40 20 0

    Similarity (%)

    Orectolobiformes

    Notostraca

    Calanoida

    Cladocera

    Hymenoptera

    Conchostraca

    Coleoptera

    Hemiptera

    Diptera

    Archaeogastropoda

    Spatangoida

    Mytiloida

    Clypeasteroida

    Other Leptostraca

    Mesogastropoda

    Arcoida

    Cirripedia

    Teuthida

    Octopoda

    Sepioidea

    Other Decapoda

    Teleostei

    Prosobranchia

    Cyclopoida

    Cubomedusae

    Dentaliida

    Harpacticoida

    Nebaliidae

    Opisthobranchia

    Phrynrophiurida

    Solemyoida

    Veneroida

    Anaspidea

    Cephalaspidea

    Cumacea

    Amphipoda

    Tanaidacea

    Caridea

    Isopoda

    Mysidacea

    Stomatopoda

    Errantia

    Sedentaria

    a

    b

    c

    de

    f

    g

    h

    i

    j

    k

    l

    Very small

    zooplanktonic

    crustaceans

    All insects

    Small epibenthic

    and benthic

    crustaceans and

    polychaetes

    All cephalopods

    and teleosts

    Large molluscs

    and echinoderms

    Very small

    epibenthic crustaceans

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    l k

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    h

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    e

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    i

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    10%

    100%

    Spatangoida

    Arcoida

    Cirripedia

    Clypeasteroida

    Mesogastropoda

    Mytiloida

    Other Leptostraca

    Archaeogastropoda

    Octopoda

    Other Decapoda

    Sepioidea

    Teleostei

    Teuthida

    Orectolobiformes

    Cubomedusae

    Cyclopoida

    Dentaliida

    Prosobranchia

    Opisthobranchia

    Phyrnophiurida

    Anaspidea

    Cephalaspidea

    Solemyida

    Veneroida

    Amphipoda

    Caridea

    Cumacea

    Errantia

    Isopoda

    Mysidacea

    Sedentaria

    Stomatopoda

    Tanaidacea

    Harpacticoida

    Nebaliidae

    Coleoptera

    Conchostraca

    Diptera

    Hemiptera

    Hymenoptera

    Other Insecta

    Calanoida

    Cladocera

    Notostraca

    Prey guild

    h

    g

    K

    N

    I

    L

    M

    O

    G

    P

    H

    F

    D

    B

    Q

    Aptychotrema vincentiana

    Epinephelides armatus

    Glaucosoma hebraicum

    Heterodontus portusjacksoni

    Squatina australis

    Aptychotrema vincentiana

    Epinephelides armatus

    Heterodontus portusjacksoni

    Pagrus auratus

    Glaucosoma hebraicum

    Aptychotrema vincentiana

    Bodianus frenchii

    Glaucosoma hebraicum

    Heterodontus portusjacksoni

    Maxillicosta scabriceps

    Myliobatis australis

    Pagrus auratus

    Platycephalus longispinis

    Pseudocaranx georgianus

    Pseudorhombus jenynsii

    Rhabdosargus sarba

    Upeneichthys lineatus

    Sillaginodes punctata

    Sillago bassensis

    Sillago burrus

    Sillago schomburgkii

    Sillago vittata

    Trygonoptera mucosa

    Pseudocaranx wrighti

    Rhabdosargus sarba

    Upeneichthys lineatus

    Parequula melbournensis

    Sillaginodes punctata

    Sillago bassensis

    Sillago robusta

    Sillago schomburgkii

    Atherinomorus ogilbyi

    Sillago bassensis

    Spratelloides robustus

    Sillaginodes punctata

    Sillago burrus

    Sillago schomburgkii

    Sillago vittata

    Lesueurina platycephala

    Upeneichthys stotti

    Trygonoptera personata

    Urolophus paucimaculatus

    Atherinomorus ogilbyi

    Lepidotrigla modesta

    Lepidotrigla papilio

    Parapriacanthus elongatus

    Pempheris klunzingeri

    Urolophus lobatus

    Urolophus paucimaculatus

    Ammotretis elongatus

    Pseudocaranx georgianus

    10

    3-5

    4,7-9

    3,9

    3-10

    8,9

    2

    4,10

    6

    5,6

    3-7

    2-5

    1,2

    7

    1,2

    2-5,7

    1-3,7-9

    2,3

    3-5

    1,2

    2

    3

    4

    3

    2,3

    4

    2,3

    2-4

    1,2

    3

    2

    1,2

    2,3

    2

    2

    2,3

    1

    1

    1

    1

    1

    1

    1

    1

    2

    2,3

    3

    2

    1,2

    1,2

    1,2

    1,2

    2,3

    2

    1

    2

    Predator guild

    E

    c

    b

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