p 5 pre-clinical investigation of the wee1 inhibitor, mk

1
Pre-clinical Investigation of the Wee1 Inhibitor, MK-1775, Using Pharmacodynamic and Mechanistic Markers in Diverse Cancer Models In Vivo Deborah Wilsker 1 , Allison M. Marrero 1 , Melinda Hollingshead 2 , Scott M. Lawrence 1 , Alice Chen 3 , Shivaani Kummar 3 , Joseph M. Covey 4 , Ralph E. Parchment 1 , Robert J. Kinders 1 , Joseph E. Tomaszewski 3 , and James H. Doroshow 3 1 Laboratory of Human Toxicology and Pharmacology, Applied/Developmental Directorate, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, Frederick, Maryland 21702; 2 Biological Testing Branch, National Cancer Institute at Frederick, Frederick, Maryland 21702; 3 Division of Cancer Treatment and Diagnosis, National Cancer Institute, Bethesda, Maryland 20892; 4 Toxicology & Pharmacology Branch, Developmental Therapeutics Program, National Cancer Institute, Bethesda, Maryland Abstract #4689 Summary and Conclusions Introduction Data Assay Development PD Marker and Mechanistic Marker Analysis in A673 Ewing Sarcoma Xenograft Model Methods Wee1 kinase is a critical regulator of the G2/M checkpoint by initiating inhibitory phosphorylation of the conserved tyrosine-15 residue of cdk1/cdc2. Wee1 also phosphorylates tyrosine 15 of cdk2 and plays a crucial role in maintaining genomic integrity during S-phase. AZD1775 (MK1775) (NSC 754352) is a small-molecule selective inhibitor of Wee1 kinase that is currently under clinical evaluation. We have developed a quantitative immunofluorescence assay to measure inhibition of Wee1 by detection of pY15 of cyclin-dependent kinases. A full analysis of the pharmacodynamic (PD) effects of Wee1 inhibition by MK1775, as well as the downstream mechanistic consequences of Wee1 inhibition on DNA repair, apoptosis, and premature mitotic entry markers, was performed using two xenograft models: A673 Ewing sarcoma and U87-MG glioblastoma. DNA repair markers (gH2AX, pNbs1 S343 ) were examined as well as the mitotic marker pHistone H3. Advanced quantitative image analysis was performed using Definiens software to measure changes in PD markers by total nuclear area measurements. Definiens software enables enhanced analysis of the markers by enumeration of the nuclei in the imaged xenograft tissues, over an entire data set with high-content capacity. Our data demonstrate greater than 80% inhibition of pY15-cdk in vivo at the clinically relevant dose of 60 mg/kg (180 mg/m 2 ) MK1775 in two xenograft models. In addition, γH2AX induction was observed after multiple doses of MK1775 as a single agent. A PD biomarker time course was determined for MK1775 and gemcitabine (NSC 750927) as single agents to develop a drug administration schedule for combination studies in a Ewing sarcoma model. The time point at which the DNA damage response peaked following administration of the maximum tolerated dose of gemcitabine in the mouse was determined. This study elucidates a broad profile of PD marker response, as well as the corresponding levels of MK1775 in the xenografts. Funded by NCI Contract No. HHSN261200800001E. This project has been funded in whole or in part with federal funds from the National Cancer Institute, National Institutes of Health, under contract HHSN261200800001E. The content of this publication does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. Government. All animals used in this research project were cared for and used humanely according to the following policies: the U.S. Public Health Service Policy on Humane Care and Use of Animals (2000); the Guide for the Care and Use of Laboratory Animals (1996); and the U.S. Government Principles for Utilization and Care of Vertebrate Animals Used in Testing, Research, and Training (1985). All Frederick National Laboratory animal facilities and the animal program are accredited by the Association for Assessment and Accreditation of Laboratory Animal Care International. A. B. C. D. Figure 3: MK1775 inhibits phosphorylation of multiple cyclin-dependent kinases. A. Cell lines treated with 250 nM of MK1775 for 4 h (A2780) or 8 h (U87). B. A Cdk2 -/- isogenic cell line was used to illustrate that pY15-Cdk2 Ab recognizes other Cdks. MK1775 drug modulates all cdk proteins recognized by pY15 Cdk2 antibody (EPR2233Y) (Abcam) C and D. ELISA demonstrates that cdk1 and -2 are modulated by MK1775 and that cdk2 capture is consistently more sensitive than Cdk1. Selection of reagent: pY15-cdk2 (EPR2233Y); Abcam to measure both cdk1 and cdk2 phosphorylation. “pY15-Cdk2” (EPR2233Y) Nontreated Vehicle 500 nM 250 nM MK1775 Non-treated Vehicle 500 nM 250 nM MK1775 “pY15-Cdk1” (10A11) Quantitative analysis Sample Nuclei # of Tumors analyzed Mean % NAP pY15- cdk Vehicle (24h p D1) 35274 4 27.50 60 mpk 24h p D1 24666 3 27.16 Vehicle (4h p D2) 73423 2 22.12 60 mpk 26842 2 3.76 40 mpk 38429 3 1.77 25 mpk 20679 2 10.02 Vehicle (4h p D5) 39219 2 51.19 60 mpk 20586 2 4.08 40 mpk 27670 2 5.0 25 mpk 28881 3 8.52 4h p D2 Mean Veh vs 60 & 40 mg/kg: p<0.05 4h p D5 Mean Veh vs 60, 40 & 25 mg/kg: p<0.05 Saline 240 mg/kg GCB 4h 240 mg/kg GCB 24h PD Marker Time Course of Gemcitabine Single-Agent In Vivo Figure 6: PD marker time course of gemcitabine single agent in vivo. A. Analysis of percent NAP (nuclear area positive) pNbs1 and gH2AX after one dose of gemcitabine (240 mg/kg) in the A673 xenograft model. B. Example images of xenograft tissues following multiplex immunofluorescence assay for gH2AX (pink) and pNbs1 (yellow). DAPI (blue). Figure 2: Definiens analysis of the pY15-cdk marker area after exposure to MK1775 (62.5 mg/kg QDx5, 4 h post-dose 5) in U87-MG xenograft tissues using pY15-cdk2 (EPR2233Y). Nuclei are classified using intensity criteria. The marker area mask was created by thresholding the marker intensity; nuclear area positive was calculated using the marker area and nuclear mask information. Figure 4: Quantitative analysis of pY15-cdk in response to MK1775 treatment in A673 Ewing sarcoma xenograft model. MK1775 was administered QD for 5 doses and harvested 24 h post-dose 1 and 4 h post-dose 2 and dose 5. Tumor quadrants were formalin fixed and paraffin embedded, and cut slides were stained for pY15-cdk by immunofluorescent assay. Quantitative analysis was performed using Definiens software. Each analyzed 20x image is represented as a point and contains over 1,000 cells. Median with interquartile range was plotted. A. B. Figure 5: Quantitative analysis of markers of DNA repair, apoptosis, proliferation, and mitotic arrest in response to single-agent MK1775 treatment in A673 Ewing sarcoma xenograft model by immunoflourescence assay. A. gH2AX was induced at 4 h post-dose 5 at 60 mg/kg, but not at earlier time points. B. DNA repair marker pNbs1 was not induced at 4 h post-dose 5 at 60 mg/kg. C. pHistone H3, a marker of mitotic arrest, is not induced by MK1775. D. Ki67, a marker of proliferation is reduced at 4 h post- d5 at 60 mg/kg. Quantitative analysis was performed using Definiens software. Each analyzed 20x image is represented as a point and contains over 1,000 cells. Median with interquartile range was plotted. C. D. MK-1775 PD Marker Analysis in U87-MG Xenograft Analysis Vehicle ctrl for 62.5 mg/kg 62.5 mg/kg Vehicle ctrl for 12.5 mg/kg 12.5 mg/kg 0 5 10 15 20 25 pY15-cdk in U87-MG Xenograft model %NAP pY15-cdk Figure 1: Quantitative analysis of pY15-cdk in response to MK1775 treatment in a U87-MG glioblastoma xenograft model. MK1775 was administered BID X 10 by IP route. Tumor quadrants were formalin fixed and paraffin embedded, and cut slides were stained for pY15-cdk by immunofluorescent assay. Quantitative analysis was performed using Definiens software. Each analyzed 20x image is represented as a point on the graph and contains over 1,000 cells. Median with interquartile range was plotted. A. B. 12.4 3.5 14.4 10.8 72% decrease 25% decrease pY15-cdk assay was developed in support of CTEP # 9350: A Phase I Study of Single-Agent MK-1775, a Wee1 Inhibitor, in Patients with Advanced Refractory Solid Tumors MK1775 Single Agent: U87-MG glioblastoma model: There is a clear reduction (~70% decrease) in pY15-cdk PD marker at the 4 h post-dose 10 time point at 62.5 mg/kg MK1775, but not at 12.5 mg/kg. A673 model: There is a clear reduction of pY15-cdk PD Marker : At 4 h post-dose 5: at all doses - 60, 40, and 25 mg/kg. (>80% decrease from average) At 4 h post-dose 2: at two doses - 60 and 40 mg/kg doses (not 25 mg/kg). There is no significant reduction of pY15-cdk after a single dose at the 24 h time point. Downstream indicators with MK1775 single agent: pHistone H3 was not induced. pNbs1 was not induced. gH2AX is induced at the latest time point and highest dose (60 mg/kg, 4 h post-dose5). gH2AX induction is probably due to apoptosis. Ki67 proliferation marker decreased at 4 h post-dose 5 (60 mg/kg) MK1775. Gemcitabine Single-Agent Time Course: PD marker timecourse for single-agent gemcitabine shows a clear “wave” of expression: pNbs1 early (412 h) and gH2AX later (24 h). The DDR effects of gemcitabine are independent of MK1775 and can be clearly evaluated in future combination studies. MK1775 did not induce DDR effects. Vehicle 24h p D1 60 mg/kg 24h p D1 Vehicle 4h p D2 60 mg/kg 4h p D2 40 mg/kg 4h p D2 25 mg/kg 4h p D2 Vehicle 4h p D5 60 mg/kg 4h p D5 40 mg/kg 4h p D5 25 mg/kg 4h p D5 0 10 20 30 40 50 60 70 80 90 100 pY15-cdk in A673 xenografts MK1775 Dose %NAP pY15-cdk Vehicle 24h pD1 Vehicle 4h p D2 Vehicle 4h p D5 25 mg/kg 24h p D1 25 mg/kg 4h p D2 25 mg/kg 4h p D5 40 mg/kg 24h p D1 40 mg/kg 4h p D2 40 mg/kg 4h p D5 60 mg/kg 24h p D1 60 mg/kg 4h p D2 60 mg/kg 4h p D5 0 5 10 15 20 25 30 35 %NAP gH2AX in A673 xenografts after single agent MK1775 %NAP gH2AX Vehicle 60 mg/kg 4h p D5 0 10 20 30 40 50 Ki67 in A673 Xenograft Model %NAP Ki67 Saline 2h 4h 7h 12h 24h 52h 0 10 20 30 40 50 pNbs1 and gH2AX in response to 240 mg/kg Gemcitibine Time post Dose (h) %NAP pNbs1 gH2AX pY15-cdk Marker mask DAPI Nuclear mask Vehicle MK1775 Immunofluorescence staining: Xenografts were formalin fixed and paraffin embedded, and were cut onto glass slides that were stained with antibodies for pY15-cdk2 (EPR2233Y, Abcam), Nbs1 pS343 (EP178, Abcam), γH2AX (JBW301, Millipore), Phospho-Histone H3 (Ser10) (D2C8), Biotinylated (Cell Signaling Tech), and Ki67 (Sp6, Abcam), using a modified version of the published protocol (Kinders et al., Clin Cancer Res 2010; 16(22): 54475457). Image acquisition and analysis: Slides were scanned using the Aperio imaging system, and 20x images were extracted using ImageScope software. Images were analyzed for nuclear area positive using Definiens Tissue Studio IF software. Images are representative of the mean. SOPs for the validated γH2AX immunofluorescence assay are posted on the DCTD web site: http://dctd.cancer.gov/ResearchResources/ResearchResources-biomarkers.htm

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Pre-clinical Investigation of the Wee1 Inhibitor, MK-1775, Using Pharmacodynamic and Mechanistic Markers in Diverse Cancer Models In Vivo

Deborah Wilsker1, Allison M. Marrero1, Melinda Hollingshead2, Scott M. Lawrence1, Alice Chen3, Shivaani Kummar3, Joseph M. Covey4, Ralph E. Parchment1, Robert J. Kinders1, Joseph E. Tomaszewski3, and James H. Doroshow3

1Laboratory of Human Toxicology and Pharmacology, Applied/Developmental Directorate, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, Frederick, Maryland 21702; 2Biological Testing Branch, National Cancer Institute at Frederick, Frederick, Maryland 21702;

3Division of Cancer Treatment and Diagnosis, National Cancer Institute, Bethesda, Maryland 20892; 4Toxicology & Pharmacology Branch, Developmental Therapeutics Program, National Cancer Institute, Bethesda, Maryland

Abstract #4689

Summary and Conclusions

Introduction Data

Assay Development

PD Marker and Mechanistic Marker Analysis in A673 Ewing Sarcoma Xenograft Model

Methods

Wee1 kinase is a critical regulator of the G2/M checkpoint by initiating inhibitory

phosphorylation of the conserved tyrosine-15 residue of cdk1/cdc2. Wee1 also

phosphorylates tyrosine 15 of cdk2 and plays a crucial role in maintaining

genomic integrity during S-phase. AZD1775 (MK1775) (NSC 754352) is a

small-molecule selective inhibitor of Wee1 kinase that is currently under clinical

evaluation. We have developed a quantitative immunofluorescence assay to

measure inhibition of Wee1 by detection of pY15 of cyclin-dependent kinases.

A full analysis of the pharmacodynamic (PD) effects of Wee1 inhibition by

MK1775, as well as the downstream mechanistic consequences of Wee1

inhibition on DNA repair, apoptosis, and premature mitotic entry markers, was

performed using two xenograft models: A673 Ewing sarcoma and U87-MG

glioblastoma. DNA repair markers (gH2AX, pNbs1S343) were examined as well

as the mitotic marker pHistone H3. Advanced quantitative image analysis was

performed using Definiens software to measure changes in PD markers by total

nuclear area measurements. Definiens software enables enhanced analysis of

the markers by enumeration of the nuclei in the imaged xenograft tissues, over

an entire data set with high-content capacity. Our data demonstrate greater

than 80% inhibition of pY15-cdk in vivo at the clinically relevant dose of 60

mg/kg (180 mg/m2) MK1775 in two xenograft models. In addition, γH2AX

induction was observed after multiple doses of MK1775 as a single agent. A PD

biomarker time course was determined for MK1775 and gemcitabine (NSC

750927) as single agents to develop a drug administration schedule for

combination studies in a Ewing sarcoma model. The time point at which the

DNA damage response peaked following administration of the maximum

tolerated dose of gemcitabine in the mouse was determined. This study

elucidates a broad profile of PD marker response, as well as the corresponding

levels of MK1775 in the xenografts. Funded by NCI Contract No.

HHSN261200800001E.

This project has been funded in whole or in part with federal funds from the National Cancer Institute, National

Institutes of Health, under contract HHSN261200800001E. The content of this publication does not necessarily

reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names,

commercial products, or organizations imply endorsement by the U.S. Government.

All animals used in this research project were cared for and used humanely according to the following policies:

the U.S. Public Health Service Policy on Humane Care and Use of Animals (2000); the Guide for the Care and Use

of Laboratory Animals (1996); and the U.S. Government Principles for Utilization and Care of Vertebrate Animals

Used in Testing, Research, and Training (1985). All Frederick National Laboratory animal facilities and the animal

program are accredited by the Association for Assessment and Accreditation of Laboratory Animal Care

International.

A. B.

C. D.

Figure 3: MK1775 inhibits phosphorylation of multiple cyclin-dependent kinases.

A. Cell lines treated with 250 nM of MK1775 for 4 h (A2780) or 8 h (U87). B. A Cdk2 -/- isogenic cell line was

used to illustrate that pY15-Cdk2 Ab recognizes other Cdks. MK1775 drug modulates all cdk proteins

recognized by pY15 Cdk2 antibody (EPR2233Y) (Abcam) C and D. ELISA demonstrates that cdk1 and -2 are

modulated by MK1775 and that cdk2 capture is consistently more sensitive than Cdk1. Selection of reagent:

pY15-cdk2 (EPR2233Y); Abcam to measure both cdk1 and cdk2 phosphorylation.

“pY15-Cdk2” (EPR2233Y)

No

ntr

ea

ted

Ve

hic

le

500 n

M

250 n

M

MK1775

No

n-t

rea

ted

Ve

hic

le

500 n

M

250 n

M

MK1775

“pY15-Cdk1” (10A11)

Quantitative analysis

Sample Nuclei # of Tumors analyzed

Mean % NAP pY15-cdk

Vehicle (24h p

D1) 35274 4 27.50

60 mpk 24h p D1

24666 3 27.16

Vehicle (4h p D2)

73423 2 22.12

60 mpk 26842 2 3.76

40 mpk 38429 3 1.77

25 mpk 20679 2 10.02

Vehicle (4h p D5)

39219 2 51.19

60 mpk 20586 2 4.08

40 mpk 27670 2 5.0

25 mpk 28881 3 8.52

4h p D2 Mean Veh vs 60 & 40 mg/kg: p<0.05 4h p D5 Mean Veh vs 60, 40 & 25 mg/kg: p<0.05

Saline 240 mg/kg GCB 4h 240 mg/kg GCB 24h

PD Marker Time Course of Gemcitabine Single-Agent In Vivo

Figure 6: PD marker time course of gemcitabine single agent in vivo.

A. Analysis of percent NAP (nuclear area positive) pNbs1 and gH2AX after one dose of

gemcitabine (240 mg/kg) in the A673 xenograft model. B. Example images of xenograft

tissues following multiplex immunofluorescence assay for gH2AX (pink) and pNbs1 (yellow).

DAPI (blue).

Figure 2: Definiens analysis of the pY15-cdk marker area after exposure to MK1775 (62.5 mg/kg

QDx5, 4 h post-dose 5) in U87-MG xenograft tissues using pY15-cdk2 (EPR2233Y). Nuclei are

classified using intensity criteria. The marker area mask was created by thresholding the marker

intensity; nuclear area positive was calculated using the marker area and nuclear mask information.

Figure 4: Quantitative analysis of pY15-cdk in response to MK1775 treatment in A673 Ewing sarcoma xenograft model.

MK1775 was administered QD for 5 doses and harvested 24 h post-dose 1 and 4 h post-dose 2 and dose 5. Tumor quadrants

were formalin fixed and paraffin embedded, and cut slides were stained for pY15-cdk by immunofluorescent assay. Quantitative

analysis was performed using Definiens software. Each analyzed 20x image is represented as a point and contains over 1,000

cells. Median with interquartile range was plotted.

A. B.

Figure 5: Quantitative analysis of markers of DNA repair, apoptosis, proliferation, and mitotic arrest in

response to single-agent MK1775 treatment in A673 Ewing sarcoma xenograft model by

immunoflourescence assay. A. gH2AX was induced at 4 h post-dose 5 at 60 mg/kg, but not at earlier time

points. B. DNA repair marker pNbs1 was not induced at 4 h post-dose 5 at 60 mg/kg. C. pHistone H3, a

marker of mitotic arrest, is not induced by MK1775. D. Ki67, a marker of proliferation is reduced at 4 h post-

d5 at 60 mg/kg. Quantitative analysis was performed using Definiens software. Each analyzed 20x image is

represented as a point and contains over 1,000 cells. Median with interquartile range was plotted.

C. D.

MK-1775

PD Marker Analysis in U87-MG Xenograft Analysis

Veh

icle

ctr

l fo

r 62.5

mg

/kg

62.5

mg

/kg

Veh

icle

ctr

l fo

r 12.5

mg

/kg

12.5

mg

/kg

0

5

1 0

1 5

2 0

2 5

p Y 1 5 -c d k in U 8 7 -M G X e n o g ra ft m o d e l

%N

AP

pY

15

-cd

k

Figure 1: Quantitative analysis of pY15-cdk in response to MK1775 treatment in a U87-MG glioblastoma

xenograft model. MK1775 was administered BID X 10 by IP route. Tumor quadrants were formalin fixed and paraffin

embedded, and cut slides were stained for pY15-cdk by immunofluorescent assay. Quantitative analysis was

performed using Definiens software. Each analyzed 20x image is represented as a point on the graph and contains

over 1,000 cells. Median with interquartile range was plotted.

A. B.

12.4

3.5

14.4 10.8

72% decrease 25% decrease

• pY15-cdk assay was developed in support of CTEP # 9350: A Phase I Study of Single-Agent

MK-1775, a Wee1 Inhibitor, in Patients with Advanced Refractory Solid Tumors

MK1775 Single Agent:

• U87-MG glioblastoma model: There is a clear reduction (~70% decrease) in pY15-cdk PD

marker at the 4 h post-dose 10 time point at 62.5 mg/kg MK1775, but not at 12.5 mg/kg.

• A673 model: There is a clear reduction of pY15-cdk PD Marker:

At 4 h post-dose 5: at all doses - 60, 40, and 25 mg/kg. (>80% decrease from average)

At 4 h post-dose 2: at two doses - 60 and 40 mg/kg doses (not 25 mg/kg).

There is no significant reduction of pY15-cdk after a single dose at the 24 h time point.

• Downstream indicators with MK1775 single agent:

• pHistone H3 was not induced.

• pNbs1 was not induced.

• gH2AX is induced at the latest time point and highest dose (60 mg/kg, 4 h post-dose5).

gH2AX induction is probably due to apoptosis.

• Ki67 proliferation marker decreased at 4 h post-dose 5 (60 mg/kg) MK1775.

Gemcitabine Single-Agent Time Course:

• PD marker timecourse for single-agent gemcitabine shows a clear “wave” of

expression: pNbs1 early (4–12 h) and gH2AX later (24 h).

• The DDR effects of gemcitabine are independent of MK1775 and can be clearly

evaluated in future combination studies. MK1775 did not induce DDR effects.

Veh

icle

24h

p D

1

60 m

g/k

g 2

4h

p D

1

Veh

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4h

p D

2

60 m

g/k

g 4

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D2

40 m

g/k

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D2

25 m

g/k

g 4

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Veh

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4h

p D

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60 m

g/k

g 4

h p

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40 m

g/k

g 4

h p

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25 m

g/k

g 4

h p

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0

1 0

2 0

3 0

4 0

5 0

6 0

7 0

8 0

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p Y 1 5 -c d k in A 6 7 3 x e n o g r a fts

M K 1 7 7 5 D o s e

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25 m

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40 m

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% N A P g H 2 A X in A 6 7 3 x e n o g ra fts a fte r s in g le a g e n t M K 1 7 7 5

%N

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K i6 7 in A 6 7 3 X e n o g r a f t M o d e l

%N

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S a lin e 2 h 4 h 7 h 1 2 h 2 4 h 5 2 h

0

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p N b s 1 a n d g H 2 A X in re s p o n s e to 2 4 0 m g /k g G e m c it ib in e

T im e p o s t D o s e (h )

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pY15-cdk Marker mask DAPI Nuclear mask

Veh

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5

Immunofluorescence staining: Xenografts were formalin fixed and paraffin embedded, and

were cut onto glass slides that were stained with antibodies for pY15-cdk2 (EPR2233Y, Abcam),

Nbs1 pS343 (EP178, Abcam), γH2AX (JBW301, Millipore), Phospho-Histone H3 (Ser10) (D2C8),

Biotinylated (Cell Signaling Tech), and Ki67 (Sp6, Abcam), using a modified version of the

published protocol (Kinders et al., Clin Cancer Res 2010; 16(22): 5447–5457).

Image acquisition and analysis: Slides were scanned using the Aperio imaging system, and 20x

images were extracted using ImageScope software. Images were analyzed for nuclear area

positive using Definiens Tissue Studio IF software. Images are representative of the mean.

SOPs for the validated γH2AX immunofluorescence assay are posted on the DCTD web site:

http://dctd.cancer.gov/ResearchResources/ResearchResources-biomarkers.htm