supporting information - ladhyx · 70 °c. finally, the pdms was cut off and sealed on a glass...

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Supporting Information Dangla et al. 10.1073/pnas.1209186110 SI Materials and Methods Microfabrication. The devices were made of polydimethylsiloxane (PDMS), formed using specically fabricated molds. The fabri- cation of the sloped regions for Figs. 13 and 4A required a hy- brid procedure that combined standard dry lm soft lithography (1) and a specic method for making the slopes. The procedure, which is sketched in Fig. S1, is as follows: Starting from a standard glass slide 1.1 mm in thickness (stage A), three layers of dry lm photoresist (1 × Eternal Laminar E8013 and 2 × Eternal Laminar E8020 negative lms of thickness 31 ± 2 μm and 49 ± 2 μm, respectively) are successively laminated using an ofce laminator at a temperature of 100 °C until the desired channel height, h 0 130 μm is reached (stage B). The photoresist lm is then exposed to UV through a photomask of the injection network. The nozzle structures are developed by immersion in an aqueous bath of carbonate potassium at 1% mass concentration (stage C). To make the sloped reservoir, n square thin glass slides 1 cm per side and h g 130 μm in thickness are glued using Norland Optical Adhesives (NOA) adhesive to the base slide at a distance l from the nozzles (stage D). Then, another thin glass slide is placed just against the nozzle and rested on top of the glass pillar from the previous step (stage E). Consequently, the glass slide is inclined compared with the base structure, at an angle given by the relation tan α = n·h g =l. Finally, the gap between the inclined slide and the base slide is lled with NOA adhesive by capillary suction and reticulated with UV (stage F). For devices with structures etched into the reservoir, dry lm photoresist structures are added to the sloped glass slide before gluing. The topography of the mold was measured using an optical prolometer (Veeco Wyco NT1100). These measurements ver- ied that the height of the reservoir increased linearly down- stream of the injection nozzle. The channels were then replicated in PDMS (Dow Corning SYLGARD 184, 1/10 ratio of curing agent to bulk material), poured over the master, and cured 2 h at 70 °C. Finally, the PDMS was cut off and sealed on a glass slide by plasma bonding to obtain a device with a sloped reservoir. The channels of Fig. 4 BE were fabricated using standard soft lithography. The slope was obtained by inating the devices, i.e., imposing an overpressure to the continuous phase, using a pressure controller (Fluigent MFCS). The dispersed phase was then injected either using a syringe pump or manually through a micropipette. Surface Treatment. The microchannel surfaces were treated to enhance the wetting properties of the continuous phase. In the case of water as the continuous phase, the plasma exposition used for bonding the glass slide to the PDMS device made the chan- nel surfaces hydrophylic. Hence, the devices were simply lled with water immediately after bonding to maintain this property. When the uorinated oil FC-40 served as the continuous phase, a solution of 1H,1H,2H,2H-peruorodecyltrichlorosilane (Sigma Aldrich) (20 μL in 1 mL of FC-40) was owed through the device for 5 min, coating the channel with a uorinated hydrophobic layer. The device was then rinsed thoroughly with pure FC-40 to remove bulk traces of surface treatment. Fluid properties. Three combinations of continuous and dispersed phases were used in the experiments: Experimental Protocols for Parallel Droplet Production. Colored droplets. Three solutions of water dyed with red, yellow, or blue food coloring are injected at a ow rate of 12 μL/min each. In the hexagonal network shown in Fig. S4A, each colored stream is split into three: one stream never in contact with the two other uids and two streams that combine each with one of the other two colors. It forms six streams colored with the rainbow gra- dation purplebluegreenyelloworangered that then mix as they ow along delay lines. The six channels produce six streams of droplets in the res- ervoir. The droplets are propelled away from the injection nozzles by the channel slope until they reach the outlet that leads to the collection container through a teon tube. To force the emulsion out of the reservoir, FC-40 is injected into the reser- voir from two separate inlets at a ow rate of 10 μL/min each. The experimental setup and the collected emulsion are shown in Fig. S4B. Alternatively, the emulsion is collected by partially cutting open the reservoir, allowing the droplets to rise by buoyancy into a syringe lled with FC-40 oil. This setup is shown in Fig. S4C. Massively parallel production. The pressure in the reservoir p o was imposed by connecting the pressure inlet and an exit hole punched in the center of the reservoir to a controllable pressure source. The pressure at the pressure inlet was set at p = 120 mbar and the pressure at the exit hole at p = 80 mbar. This 40-mbar pressure difference creates a ow from the pressure inlet to the exit hole that evacuates the droplets out of the reservoir. The FC-40 oil was injected at a total ow rate of 20 μL/min from a single inlet into the large distribution channel that feeds all of the nozzles. As seen in Movie S3, a few nozzles are not produc- ing droplets due to clogging of their inlet channels. Nonetheless, neighboring nozzles are unaffected and produce droplets iden- tical in size to those of the other nozzles. This observation high- lights the robustness of the drop production mechanism. The monodispersity of the emulsion is evidenced in Fig. S5, which shows a hexagonal matrix of 250 droplets in the reservoir. 1. Stephan K, et al. (2007) Fast prototyping using a dry lm photoresist: Microfabrication of soft-lithography masters for microuidic structures. J Micromech Microeng 17(N69):74. 2. Baret JC (2012) Surfactants in droplet-based microuidics. Lab Chip 12(3):422433. 3. Clausell-Tormos J, et al. (2008) Droplet-based microuidic platforms for the encapsulation and screening of mammalian cells and multicellular organisms. Chem Biol 15(5):427437. 4. Holtze C, et al. (2008) Biocompatible surfactants for water-in-uorocarbon emulsions. Lab Chip 8(10):16321639. Continuous phase Viscosity, μ c , cP Dispersed phase Viscosity, μ d , cP Interfacial tension, γ, mN/m H 2 O + C 6 E 12 * at 1 CMC 1 Air 2 × 10 2 50 ± 2 H 2 O + SDS at 1% mass concentration 1 FC-40 oil (3M) 4.1 12 ± 2 FC-40 oil (3M) + PEG-PFPE (24) at 1% mass concentration 4.1 H 2 O 1 7 ± 1 *C 6 E 12 , hexaethylene glycol monodecyl ether, provided by the LPS. CMC, critical micellar concentration. Dangla et al. www.pnas.org/cgi/content/short/1209186110 1 of 5

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Supporting InformationDangla et al. 10.1073/pnas.1209186110SI Materials and MethodsMicrofabrication. The devices were made of polydimethylsiloxane(PDMS), formed using specifically fabricated molds. The fabri-cation of the sloped regions for Figs. 1–3 and 4A required a hy-brid procedure that combined standard dry film soft lithography(1) and a specific method for making the slopes.The procedure, which is sketched in Fig. S1, is as follows:

Starting from a standard glass slide 1.1 mm in thickness (stage A),three layers of dry film photoresist (1 × Eternal Laminar E8013and 2 × Eternal Laminar E8020 negative films of thickness 31± 2μm and 49± 2 μm, respectively) are successively laminated usingan office laminator at a temperature of 100 °C until the desiredchannel height, h0 ≈ 130 μm is reached (stage B). The photoresistfilm is then exposed to UV through a photomask of the injectionnetwork. The nozzle structures are developed by immersion in anaqueous bath of carbonate potassium at 1% mass concentration(stage C). To make the sloped reservoir, n square thin glass slides1 cm per side and hg ≈ 130 μm in thickness are glued usingNorland Optical Adhesives (NOA) adhesive to the base slide ata distance l from the nozzles (stage D). Then, another thin glassslide is placed just against the nozzle and rested on top of theglass pillar from the previous step (stage E). Consequently, theglass slide is inclined compared with the base structure, at anangle given by the relation tan  α= n·hg=l. Finally, the gap betweenthe inclined slide and the base slide is filled with NOA adhesive bycapillary suction and reticulated with UV (stage F). For deviceswith structures etched into the reservoir, dry film photoresiststructures are added to the sloped glass slide before gluing.The topography of the mold was measured using an optical

profilometer (Veeco Wyco NT1100). These measurements ver-ified that the height of the reservoir increased linearly down-stream of the injection nozzle. The channels were then replicatedin PDMS (Dow Corning SYLGARD 184, 1/10 ratio of curingagent to bulk material), poured over the master, and cured 2 h at70 °C. Finally, the PDMS was cut off and sealed on a glass slideby plasma bonding to obtain a device with a sloped reservoir.The channels of Fig. 4 B–E were fabricated using standard soft

lithography. The slope was obtained by inflating the devices, i.e.,imposing an overpressure to the continuous phase, using a pressurecontroller (Fluigent MFCS). The dispersed phase was then injectedeither using a syringe pump or manually through a micropipette.

Surface Treatment. The microchannel surfaces were treated toenhance the wetting properties of the continuous phase. In thecase of water as the continuous phase, the plasma exposition usedfor bonding the glass slide to the PDMS device made the chan-nel surfaces hydrophylic. Hence, the devices were simply filledwith water immediately after bonding to maintain this property.When the fluorinated oil FC-40 served as the continuous phase,a solution of 1H,1H,2H,2H-perfluorodecyltrichlorosilane (SigmaAldrich) (20 μL in 1 mL of FC-40) was flowed through the devicefor 5 min, coating the channel with a fluorinated hydrophobiclayer. The device was then rinsed thoroughly with pure FC-40 toremove bulk traces of surface treatment.

Fluid properties. Three combinations of continuous and dispersedphases were used in the experiments:

Experimental Protocols for Parallel Droplet Production. Coloreddroplets. Three solutions of water dyed with red, yellow, or bluefood coloring are injected at a flow rate of 12 μL/min each. In thehexagonal network shown in Fig. S4A, each colored stream issplit into three: one stream never in contact with the two otherfluids and two streams that combine each with one of the othertwo colors. It forms six streams colored with the rainbow gra-dation purple–blue–green–yellow–orange–red that then mix asthey flow along delay lines.The six channels produce six streams of droplets in the res-

ervoir. The droplets are propelled away from the injectionnozzles by the channel slope until they reach the outlet that leadsto the collection container through a teflon tube. To force theemulsion out of the reservoir, FC-40 is injected into the reser-voir from two separate inlets at a flow rate of 10 μL/min each.The experimental setup and the collected emulsion are shownin Fig. S4B.Alternatively, the emulsion is collected by partially cutting open

the reservoir, allowing the droplets to rise by buoyancy intoa syringe filled with FC-40 oil. This setup is shown in Fig. S4C.Massively parallel production. The pressure in the reservoir po wasimposed by connecting the pressure inlet and an exit holepunched in the center of the reservoir to a controllable pressuresource. The pressure at the pressure inlet was set at p= 120 mbarand the pressure at the exit hole at p= 80 mbar. This 40-mbarpressure difference creates a flow from the pressure inlet to theexit hole that evacuates the droplets out of the reservoir.The FC-40 oil was injected at a total flow rate of 20 μL/min from

a single inlet into the large distribution channel that feeds all ofthe nozzles. As seen in Movie S3, a few nozzles are not produc-ing droplets due to clogging of their inlet channels. Nonetheless,neighboring nozzles are unaffected and produce droplets iden-tical in size to those of the other nozzles. This observation high-lights the robustness of the drop production mechanism.The monodispersity of the emulsion is evidenced in Fig. S5,

which shows a hexagonal matrix of ∼250 droplets in the reservoir.

1. Stephan K, et al. (2007) Fast prototyping using a dry film photoresist: Microfabrication ofsoft-lithography masters for microfluidic structures. J Micromech Microeng 17(N69):74.

2. Baret JC (2012) Surfactants in droplet-based microfluidics. Lab Chip 12(3):422–433.3. Clausell-Tormos J, et al. (2008) Droplet-based microfluidic platforms for the

encapsulation and screening of mammalian cells and multicellular organisms. ChemBiol 15(5):427–437.

4. Holtze C, et al. (2008) Biocompatible surfactants for water-in-fluorocarbon emulsions.Lab Chip 8(10):1632–1639.

Continuous phaseViscosity,μc, cP

Dispersedphase

Viscosity,μd, cP

Interfacialtension,γ, mN/m

H2O + C6E12* at 1 CMC† 1 Air 2 × 10–2 50 ± 2H2O + SDS at 1% mass

concentration1 FC-40 oil

(3M)4.1 12 ± 2

FC-40 oil (3M) + PEG-PFPE(2–4) at 1% massconcentration

4.1 H2O 1 7 ± 1

*C6E12, hexaethylene glycol monodecyl ether, provided by the LPS.†CMC, critical micellar concentration.

Dangla et al. www.pnas.org/cgi/content/short/1209186110 1 of 5

A B C

D EF

glass slide

dry filmphotoresist

h0

thin glassslides

thin glassslide

n hg

hgl

NOA glue

Fig. S1. (A–F) Sketch of the successive microfabrication steps required to produced a device with a sloped reservoir.

(µm

)

10−1 10 0 10 1

10 2

4

6

8

10

12

H O in FC-40FC-40 in H Oair in H O

2

2

2

d

(µL/ min)

Fig. S2. Variation of drop radius Rd with flow rate Q for three reservoir slopes (α= 0:58, α= 1:28, and α= 2:68) and three fluid pairs: oil in water (■, γ = 12 mN/m),water in oil (▲, γ =7 mN/m), and air in water (*, γ = 50 mN/m).

1 µL/min

Cou

nts

0.98 0.99 1 1.01 1.020

10

20

30

Fig. S3. Histogram of the measured radii Rd relative to the mean radius Rmean = 641 μm of 375 successive droplets produced during steady state at a flow rateQ= 1 μL/min with a nozzle of dimensions h0 = 130 μm, w = 250 μm, and α= 1:28. A Gaussian fit (line) yields a SD of σ = 0:2%.

Dangla et al. www.pnas.org/cgi/content/short/1209186110 2 of 5

Fig. S4. (A) Photograph of the hexagonal network that produces six colored streams in a rainbow gradation. (Scale bar, 5 mm.) (B) Photograph of the mi-crofluidic chip producing the rainbow-colored emulsion that is then collected into a large container. (Scale bar, 1 cm.) (C) Photograph of a microfluidic chip thathas a reservoir partially cut open to access the rainbow emulsion. The droplets are collected as they rise by buoyancy into a syringe placed above the reservoir.

Fig. S5. Image of the emulsion in the reservoir while it is been produced. (Scale bar, 1 mm.)

Dangla et al. www.pnas.org/cgi/content/short/1209186110 3 of 5

Movie S1. Nine experimental movies (60 frames/s) showing the droplet production for different slopes and flow rates. The three nozzles have a identicalheight h0 = 130 μm and width w = 250 μm but different slopes α= 0:58, 1.2°, and 2.6°. They produce FC-40 droplets in water + SDS at flow rates Q= 0:1μL/min,1 μL/min, and 10 μL/min. To facilitate visualization, frames rates have been modified:For Q=0:1 μL/min, movies are sped up 3×.For Q=1 μL/min, movies are shown in real time.For Q=10 μL/min, movies are slowed down 3×.

Highlighted is the coupled dependence of the produced drop radius Rd on the channel slope α and injection flow rate Q.

Movie S1

Movie S2. Experimental movie showing the production of a rainbow colored emulsion from 6 parallel nozzles of dimensions h0 = 130 μm, w =200 μmand α= 1:28.

Movie S2

Dangla et al. www.pnas.org/cgi/content/short/1209186110 4 of 5

Movie S3. Experimental movie sped up 2× of an inflatable device with 256 nozzles of height h0 = 15 μm simultaneously producing 230 pL FC-40 droplets ata total frequency of 1.5 kHz into a circular reservoir filled with water + SDS pressurized at po = 100 mbar.

Movie S3

Movie S4. This real-time movie demonstrates the rapid partitioning of a sample into ∼20,000 monodisperse droplets of picoliter volume, using only a mi-crochip and a hand-held micropipette. The device is identical to the one described in Fig. 4 B–E of the main text: 256 nozzles of identical dimensions (h0 = 15 μmand w = 50 μm) lead to a central circular reservoir 15 mm in diameter. The field of view displays the microchip placed under a Leica MZ16 FA stereomicroscopewith a 0.7× magnification and the live image captured by the Spot camera mounted onto the microscope. The device is initially filled with water + SDS andinflated by connecting the outlet to a vertical tubing 10 cm in height. A 20-μL hand-held pipette is prepared by successively sucking 5 μL of water + SDS, 5 μL ofFC-40, and 10 μL of water + SDS into the pipette tip. The pipette tip is then inserted into the inlet of the device and the fluids are injected by hand. During themovie, the sample of FC-40 oil reaches the nozzles and partitions into thousands of monodispersed picoliter drops that form a 2D array in the central reservoir.

Movie S4

Dangla et al. www.pnas.org/cgi/content/short/1209186110 5 of 5