what to study · 2019-11-21 · cell communication, etc: what to study . here’s what you will...
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What to Study: Ce ll Co m m u n ica t io n ,
Ap p lica t io n s o f Ce ll Co m m u n ica t io n &
Ce ll Divis io n
Cell Communication, etc: What to Study He re ’s w h a t yo u w ill n e e d t o m a ke su re yo u u n d e rst a n d in o rd e r t o p re p a re fo r o u r e xa m :
● Ce ll Co m m u n ica t ion○ Sig n a l Tra n sd u c t ion P a t h w a ys ○ G p ro t e in lin ke d re ce p t o rs /G p ro t e in s○ P ro t e in kin a se s○ Typ e s o f ce ll s ig n a lin g : p a ra c rin e , a u t o c rin e , e n d o crin e
● Ap p lica t ion s o f Ce ll Co m m u n ica t ion : Bo d y Syst e m s ○ Ho w d o t h e fo llo w in g syst e m s a llo w o rg a n ism s t o
co m m u n ica t e , m a in t a in h o m e o st a s is? ■ Im m u n e■ En d o crin e■ Ne rvo u s
Communication Concepts to Un d e rst a n d
● St ru c t u re o f m o le cu le s a n d t h e re la t ion sh ip t o fu n c t ion
● P h osp h o ryla t ion a n d e n e rg y t ra n sfe r● Me m b ra n e s t ru c t u re a n d fu n c t ion● Ge n e e xp re ssion a n d e n zym e a c t ivit y ● Com m on p roce sse s fo r a ll life
Prokaryote vs Eukaryote Cell SignalingEu ka ryo t e s u se :● G p ro t e in s/G p ro t e in
lin ke d re ce p t o rs ● P ro t e in kin a se s ● En d ocrin e s ig n a lin g
○ Horm on e s● P a ra c rin e s ig n a lin g
○ Im m u n e syst e m ce lls , syn a p t ic t ra n sm ission
● Au t oc rin e s ig n a lin g
P roka ryo t e s u se : ● Qu oru m se n sin g
Quorum Sensing Qu oru m se n sin g is a w a y b a c t e ria ca n com m u n ica t e w it h o t h e r b a c t e ria
● In t e rsp e c ie s com m u n ica t ion
● In t ra sp e c ie s com m u n ica t ion
Core Process: Signal TransductionLike a p h on e ca ll:● Re ce p t ion● Tra n sd u c t ion● Re sp on se
G protein linked receptors use second m e sse n g e rs a n d p h o sp h o ryla t io n ca sca d e s
Sa m e id e a : re ce p t ion , t ra n sd u c t ion a n d re sp on se
Me ssa g e is a m p lifie d so fe w e r s ig n a lin g m o le cu le s a re n e e d e d
Like se n d in g a vira l t e xt o r Tw e e t t h a t g e t s re t w e e t e d
Epinephrine signaling: An e xa m p le o f a G-p ro t e in lin ke d p a t h w a y
Ut ilize d in “fig h t o r flig h t ” re sp on se
He lp s t o m ob ilize g lu cose d u rin g t im e s o f s t re ss
Protein Kin a se s● Kin a se s
p h osp h o ryla t e o t h e r m o le cu le s t o e n a b le t h e m t o d o w ork
● Sig n a lin g ca sca d e s a re a lso in vo lve d : t h in k re t w e e t s!
Types of Eukaryote Signaling: En d o crin e
En d ocrin e s ig n a lin g : t h e ce ll se c re t e s a lig a n d m o le cu le t h a t t ra ve ls t h rou g h t h e b od y t o a t a rg e t ce ll
Types of Eukaryote Signaling: P a ra c rin e
P a ra c rin e s ig n a lin g : t h e ce ll se c re t e s a lig a n d t h a t b in d s t o n e a rb y ce lls
Types of Eukaryote Signaling: Au t o c rin e
Au t oc rin e s ig n a lin g : t h e ce ll se c re t e s a lig a n d t h a t b in d s t o it s ow n m e m b ra n e
Application of Cell Communication: Im m u n e Syst e m
P la n t s h a ve hypersensitive response● P a t h og e n s t rig g e r
re le a se o f ch e m ica ls t h a t d e st roy in fe c t e d ce lls a n d t h e a d ja ce n t ce lls
● Not e t h e u se o f STP s h e re
Application of Cell Communication: Im m u n e Syst e m
Specific immune response● Tw o t yp e s
○ Ce ll m e d ia t e d ○ Hu m ora l
● Not e ro le o f He lp e r T ce ll: coo rd in a t e s b o t h re sp on se s
Application of Cell Communication: Im m u n e Syst e m
Antibodies and Antigens● An t ib od ie s: p rod u ce d b y
p la sm a B ce lls ● An t ig e n s: p re se n t on
su rfa ce o f p a t h og e n s, ce lls● Bin d in g s it e on a n t ib od y
fit s sh a p e o f a n t ig e n
Application of Cell Communication: Ne rvo u s Syst e m
Transmission of information between neurons happens at synapses: kn o w w h a t h a p p e n s, ro le o f n e u ro t ra n sm it t e rs
AP Biology
Cell Differentiation Demands Coordination
Different tissues & organs develop, grow, and repair at different rates
◆ This is critical for normal growth, development & maintenance▪ Timing of cell division must be right▪ Rates of cell division are unique▪ Not all cells can have the
same Cell Cycle
AP Biology
G2
S G1
Mmetaphase
prophaseanaphase
telophase
interphase (G1, S, G2phases)mitosis (M)cytokinesis (C)
C
▪ Embryos◆ cell cycle < 20 minute
▪ Skin Cells◆ Divide frequently throughout life◆ 12-24 hours cycle
▪ Liver Cells◆ Retain ability to divide, but keep it in reserve◆ Divide once every year or two
▪ Mature Nerve Cells & Muscle Cells◆ Do not divide at all after maturity◆ Permanently in G0
Frequency of Cell Division Varies by Type
AP Biology
Phases of the Cell Cycle
AP Biology
Phases of the Cell Cycle● The mitoticphase alternates with interphase:
G1→ S → G2 → mitosis → cytokinesis● Interphase(90 % of cell cycle)
▪ G1Phase: cell grows and carries out normal functions
▪ S Phase: duplicates chromosomes▪ G2 Phase: prepares for cell division
● M Phase(mitotic)▪ Mitosis: nucleus divides (PMAT)
AP Biology
Mitosis : Prophase → Metaph ase →An aph ase → Teloph ase
PMAT not IPMAT!
Cytokinesis in animal vs. plant cells
AP Biology
Checkpoint Control System▪ Checkpoints
◆ Cell cycle controlled by STOP & GOchemical signals at critical points
◆ Signals indicate if key cellular processes have been completed correctly▪ External- Growth Factors▪ Internal- Promoting Factors
• Cyclins
AP Biology
3 Major Checkpoints “Ask” Critical QuestionsG1/S
◆ Can DNA synthesis begin?G2/M
◆ Has DNA synthesis been completed correctly?
◆ Commitment to MitosisSpindle Checkpoint
◆ Are all chromosomes attached to spindle?
AP Biology
“Go-ahead” Protein signals▪ Protein signals that promote cell
growth & division◆ External “Go-ahead”Signals
▪ “Growth Factors”◆ Internal “Go-ahead”Signals
▪ “Promoting Factors”▪ Primary Mechanism of Control
◆ Phosphorylation-▪ adds phosphate groups to target
AP Biology
“Go-ahead” Protein signals▪ Protein signals that promote cell growth & division
◆ External “Go-ahead”Signals▪ “Growth Factors”
◆ Internal “Go-ahead”Signals▪ “Promoting Factors”
▪ Primary Mechanism of Control◆ Phosphorylation-
▪ adds phosphate groups to target▪ Kinase- a phosphorylating enzyme▪ either activates or inactivates cell signals
AP Biology
Promoting Factors▪ Internal Protein Signals
◆ cyclins▪ regulatory proteins▪ levels cycle in the cell
◆ Cdks▪ cyclin-dependent kinases▪ phosphorylates cellular proteins
• activates or inactivates proteins◆ Cdk-cyclin complex
▪ triggers passage through different stages of cell cycle▪ ex. Maturation Promoting Factor
activated Cdk
inactivated Cdk
AP Biology
Cyclin & Cyclin-dependent kinases▪ CDKs & cyclin drive cell from
one phase to next in cell cycle
◆ proper regulation of cell cycle is so key to life that the genes for these regulatory proteins have been highly conservedthrough evolution
◆ the genes are basically the same in yeast, insects, plants & animals (including humans)
AP Biology
Specific Cyclins and CDKs promote progression through specific phases
AP Biology
Cdk / G1
cyclin
Cdk / G2cyclin (MPF)G2
S
G1
CM
G2 / M checkpoint
G1 / S checkpoint
APC
Active Inactive
ActiveInactiveInactive
Active
mitosiscytokinesis
MPF = Mitosis Promoting FactorAPC = Anaphase Promoting Comple
• Replication completed• DNA integrity
Chromosomes attached at metaphase plate
Spindle checkpoint
• Growth factors• Nutritional state of cell• Size of cell
AP Biology
Growth Factors and Cancer▪ Growth factors can create cancers
◆ proto-oncogenes▪ normally activates cell division
• growth factor genes • become oncogenes (cancer-causing) when mutated
▪ if switched “ON” can cause cancer▪ example: RAS (activates cyclins)
◆ tumor-suppressor genes▪ normally inhibits cell division
if ithd “OFF”
AP Biology
Cancer & Cell Growth▪ Cancer is essentially a failure
of cell division control◆ unrestrained, uncontrolled cell growth
▪ What control is lost?◆ lose checkpoint stops◆ gene p53 plays a key role in G1/S restriction point
▪ p53 protein halts cell division if it detects damaged DNA • options:
■ stimulates repair enzymes to fix DNA ■ forces cell into G0 resting stage■ keeps cell in G1 arrest ■ causes apoptosis of damaged cell
▪ ALL cancers have to shut down p53 activity
p53 discovered at Stony Brook by Dr. Arnold Levine
p53 is theCell CycleEnforcer
AP Biology
DNA damage is causedby heat, radiation, or chemicals.
p53 allows cellswith repairedDNA to divide.
Step 1
DNA damage iscaused by heat,radiation, or chemicals.
Step 1 Step 2
Damaged cells continue to divide.If other damage accumulates, thecell can turn cancerous.
Step 3p53 triggers the destruction of cells damaged beyond repair.
ABNORMAL p53
NORMAL p53
abnormalp53 protein
cancercellStep 3The p53 protein fails to stop
cell division and repair DNA.Cell divides without repair todamaged DNA.
Cell division stops, and p53 triggers enzymes to repair damaged region.
Step 2
DNA repair enzymep53protein p53
protein
p53 — master tumor suppressor gene