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CH Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson Ferreira Group 12/3/2015

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Page 1: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Bond Functionalization: New Strategies for the Synthesis of

Complex Natural Products and Pharmaceuticals

Phil Knutson

Ferreira Group

12/3/2015

Page 2: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

New strategies in organic synthesis

nsf-cchf.com

Page 3: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

What is C–H Functionalization?

D. Sames, et al. Science 2006, 312, 67-72.

Page 4: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

What is C–H Functionalization?

D. Sames, et al. Science 2006, 312, 67-72.

Page 5: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Friedel-Crafts acylation/alkylation

Oxidative phenol-phenol coupling

Allylic oxidation via SeO2 or other stoichiometric transition metal

Ortho- or remote-metalation via stoichiometric strong bases

What is not C–H Functionalization?

K. Itami, et al. Angew. Chem. Int. Ed. 2012, 51, 8960-9009.

Page 6: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Examples in complex molecule synthesis

Two Total Syntheses Utilizing C–H Functionalization

Content

C-C Bond Formation C–Heteroatom Bond Formation

Aromatic C–H Arylation C–H Amination (C–H Insertion of Nitrenes)

C(sp2)–H Alkenylation and Alkylation C–H Amination (C–H Insertion of Metal Nitrenoids)

Pd-cat. Directed C(sp3)–H Functionalization C–H Allylic Oxidation

C–H Insertion of Metal Carbenoids C–H Borylation

C–H Halogenation

Page 7: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

Types of C–H Functionalization

K. Fagnou, et al. J. Org. Chem. 2008, 73, 5022.

Page 8: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Aromatic C–H Arylation

D. Trauner, et al. Org. Lett. 2005, 7, 5207-5209.

Page 9: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Aromatic C–H Arylation

D. Trauner, et al. Org. Lett. 2005, 7, 5207-5209.

Page 10: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Types of C–H Functionalization

Page 11: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C(sp2)–H Alkenylation and Alkylation

R.G. Bergman, J.A. Ellman, et al. J. Am. Chem. Soc. 2005, 127, 13496-13497.

Page 12: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C(sp2)–H Alkenylation and Alkylation

R.G. Bergman, J.A. Ellman, et al. J. Am. Chem. Soc. 2005, 127, 13496-13497.

Page 13: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C(sp2)–H Alkenylation and Alkylation

R.G. Bergman, J.A. Ellman, et al. J. Am. Chem. Soc. 2005, 127, 13496-13497.

Page 14: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

Types of C–H Functionalization

Page 15: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Directed C(sp3)–H Functionalization

D. Sames, et al. J. Am. Chem. Soc. 2002, 124, 11856-11857.

Page 16: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

C–H Insertion Metal Carbenoids

Types of C–H Functionalization

Page 17: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Insertion of Metal Carbenoids

X. Lei, et al. J. Am. Chem. Soc. 2015, 137, 11946−11949.

Page 18: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

C–H Insertion of Metal Carbenoids

C–Heteroatom Bond Formation

C–H Amination (C–H Insertion of Nitrenes)

Types of C–H Functionalization

Page 19: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Amination (Nitrene Insertion)

H. Tokuyama, et al. Angew. Chem. Int. Ed. 2010, 49, 5925 –5929.

Page 20: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

C–H Insertion of Metal Carbenoids

C–Heteroatom Bond Formation

C–H Amination (C–H Insertion of Nitrenes)

C–H Amination (C–H Insertion of Metal Nitrenoids)

Types of C–H Functionalization

Page 21: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Amination (C–H Insertion of Metal Nitrenoids)

J. Du Bois, et al. J. Am. Chem. Soc. 2003, 125, 11510-11511.

Page 22: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

C–H Insertion of Metal Carbenoids

C–Heteroatom Bond Formation

C–H Amination (C–H Insertion of Nitrenes)

C–H Amination (C–H Insertion of Metal Nitrenoids)

C–H Allylic Oxidation (Pd-Catalyzed)

Types of C–H Functionalization

M. White, et al. J. Am. Chem. Soc., 2005, 127, 6970-6971.

M. White, et al. Nature Chem. 2009, 125, 547-551.

Page 23: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Allylic Oxidation (Pd-Catalyzed)

M. White, et al. Nature Chem. 2009, 125, 547-551.

Page 24: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Allylic Oxidation (Pd-Catalyzed)

M. White, et al. Nature Chem. 2009, 125, 547-551.

Page 25: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Allylic Oxidation (Pd-Catalyzed)

M. White, et al. Nature Chem. 2009, 125, 547-551.

Page 26: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Allylic Oxidation (Pd-Catalyzed)

M. White, et al. Nature Chem. 2009, 125, 547-551.

Page 27: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

C–H Insertion of Metal Carbenoids

C–Heteroatom Bond Formation

C–H Amination (C–H Insertion of Nitrenes)

C–H Amination (C–H Insertion of Metal Nitrenoids)

C–H Allylic Oxidation (Pd-Catalyzed)

C–H Borylation

Types of C–H Functionalization

Page 28: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Borylation

J. F. Hartwig, et al. J. Am. Chem. Soc. 2011, 133, 2088–2091.

Page 29: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C-C Bond Formation

Aromatic C–H Arylation

C(sp2)–H Alkenylation and Alkylation

Directed C(sp3)–H Functionalization

C–H Insertion of Metal Carbenoids

C–Heteroatom Bond Formation

C–H Amination (C–H Insertion of Nitrenes)

C–H Amination (C–H Insertion of Metal Nitrenoids)

C–H Allylic Amination/Oxidation (Pd-Catalyzed)

C–H Borylation

C–H Halogenation (Metal-Catalyzed)

Types of C–H Functionalization

Page 30: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

C–H Halogenation

K. Itami, et al. Angew. Chem. Int. Ed. 2012, 51, 8960-9009.

Page 31: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Examples in complex molecule synthesis

Two Total Syntheses Utilizing C–H Functionalization

Content

C-C Bond Formation C–Heteroatom Bond Formation

Aromatic C–H Arylation C–H Amination (C–H Insertion of Nitrenes)

C(sp2)–H Alkenylation and Alkylation C–H Amination (C–H Insertion of Metal Nitrenoids)

Pd-cat. Directed C(sp3)–H Functionalization C–H Allylic Oxidation

C–H Insertion of Metal Carbenoids C–H Borylation

C–H Halogenation

Page 32: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

(+)-Austamide

Y. Kishi, et al. J. Am. Chem. Soc. 1979, 101, 6786-6788.

E. J. Corey, J. Am. Chem. Soc. 2002, 124, 7904-7905.

Page 33: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

(+)-Austamide

E. J. Corey, J. Am. Chem. Soc. 2002, 124, 7904-7905.

Page 34: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

(+)-Austamide

E. J. Corey, J. Am. Chem. Soc. 2002, 124, 7904-7905.

Page 35: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

(+)-Austamide

E. J. Corey, J. Am. Chem. Soc. 2002, 124, 7904-7905.

Page 36: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Dragmacidin D

B. M. Stoltz, et al. J. Am. Chem. Soc. 2002, 124, 13179-13184.

K. Itami, et al. J. Am. Chem. Soc. 2011, 133, 19660–19663.

Page 37: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Dragmacidin D

K. Itami, et al. J. Am. Chem. Soc. 2011, 133, 19660–19663.

Page 38: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Dragmacidin D

K. Itami, et al. J. Am. Chem. Soc. 2011, 133, 19660–19663.

Page 39: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Dragmacidin D

K. Itami, et al. J. Am. Chem. Soc. 2011, 133, 19660–19663.

Page 40: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Dragmacidin D

K. Itami, et al. J. Am. Chem. Soc. 2011, 133, 19660–19663.

Page 41: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Dragmacidin D

K. Itami, et al. J. Am. Chem. Soc. 2011, 133, 19660–19663.

Page 42: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Comparing total syntheses

K. Itami, et al. Angew. Chem. Int. Ed. 2012, 51, 8960-9009.

Page 43: C-H Bond Functionalization: New Strategies for the …...C–H Bond Functionalization: New Strategies for the Synthesis of Complex Natural Products and Pharmaceuticals Phil Knutson

Examples in complex molecule synthesis

Two Total Syntheses Utilizing C–H Functionalization

Summary

C-C Bond Formation C–Heteroatom Bond Formation

Aromatic C–H Arylation C–H Amination (C–H Insertion of Nitrenes)

C(sp2)–H Alkenylation and Alkylation C–H Amination (C–H Insertion of Metal Nitrenoids)

Pd-cat. Directed C(sp3)–H Functionalization C–H Allylic Oxidation

C–H Insertion of Metal Carbenoids C–H Borylation

C–H Halogenation