enhancement of accessibility of cellulose by expansins

54
(12) United States Patent Cosgrove US006326470B1 (10) Patent N0.: (45) Date of Patent: US 6,326,470 B1 Dec. 4, 2001 (54) ENHANCEMENT OF ACCESSIBILITY OF CELLULOSE BY EXPANSINS (75) Inventor: Daniel J. Cosgrove, Pennsylvania Furnace, PA (US) (73) Assignee: The Penn State Research Foundation, University Park, PA (US) ( * ) Notice: Subject to any disclaimer, the term of this patent is extended or adjusted under 35 U.S.C. 154(b) by 0 days. (21) Appl. No.: 09/429,675 (22) Filed: Oct. 28, 1999 Related US. Application Data 63 Continuation-in- art of a lication No. 08/834,327, ?led on P PP A r. 15 1997 now Pat. No. 5 990 283. P 7 7 7 7 60 Provisional a lication No. 60/105,906, ?led on Oct. 28, PP 1998. nt. . ........................... .. ; ; 51 I C] 7 C07K 1/00 C07K 14/00 C07K 16/00; C07K 17/00 (52) US. Cl. ........................ .. 530/370; 530/372; 530/375; 530/376; 530/377; 530/378; 530/379; 435/183; 435/195; 435/209 (58) Field of Search ................................... .. 530/370, 372, 530/375, 376, 377—379; 435/183, 195, 209 (56) References Cited U.S. PATENT DOCUMENTS 3,844,890 10/1974 Horikoshi et al. ................... .. 195/62 3,966,543 6/1976 Cayle et al. .. 162/158 4,004,976 1/1977 Isaac ............... .. 565/598 5,175,275 12/1992 Dobashi et al. 536/56 5,959,082 * 9/1999 Cosgrove et al. ................. .. 530/370 OTHER PUBLICATIONS McQueen—Mason et al. Proc. Natl. Acad. Sci. USA, vol. 91, pp. 6574—6578, Jul. 1994.* Fry, Stephen C., Physiologia Plantarium 75:532—536, 1989. Patel, Praful, in “Biotechnology Applications and Research”, eds. Cheremisinoff, RN. and Ouellette, R.P. pp. 534—562, Technomic Publishing Company, Inc., Lancaster, PA, 1985. (List continued on next page.) Primary Examiner—DWayne C. Jones Assistant Examiner—C. Delaceroix-Muirheid (74) Attorney, Agent, or Firm—Zarley, McKee, Thomte, Voorhees & Sease (57) ABSTRACT Plant cell expansion is regulated by Wall relaxation and yielding, Which is thought to be catalyzed by elusive “Wall loosening” enZymes. By employing a reconstitution approach, We initially found that a crude protein extract from the cell Walls of groWing cucumber seedlings possessed the ability to induce the extension of isolated cell Walls. This activity Was restricted to the groWing region of the stem and could induce the extension of isolated cell Walls from various dicots and monocots, but Was less effective on grass coleoptile Walls. Sequential HPLC fractionation of the active Wall extract revealed tWo proteins With molecular masses of 29 and 30 kD, as measured by SDS-PAGE, associated With such activity. Each protein, by itself, could induce Wall extension Without detectable hydrolytic break doWn of the Wall. We proposed the name “expansins” for this class of proteins. Expansins have been isolated from various plant sources including oat, cucumber, broccoli, celery, tomato, cotton, cabbage, and corn, and also from snail and its feces. These proteins Weaken the intermolecular bonds betWeen plant Wall polysaccharides. They decrease the mechanical strength of commercial products made from polysaccharides, such as paper, and therefore present a novel approach in developing neW technologies in industries Which make use of such polysaccharides, such as in the paper industry, in the applications of polysaccharide gums and related products. These proteins moreover present a novel approach in the control of plant groWth. 15 Claims, 33 Drawing Sheets

Upload: hoangnhu

Post on 31-Dec-2016

215 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Enhancement of accessibility of cellulose by expansins

(12) United States Patent Cosgrove

US006326470B1

(10) Patent N0.: (45) Date of Patent:

US 6,326,470 B1 Dec. 4, 2001

(54) ENHANCEMENT OF ACCESSIBILITY OF CELLULOSE BY EXPANSINS

(75) Inventor: Daniel J. Cosgrove, Pennsylvania Furnace, PA (US)

(73) Assignee: The Penn State Research Foundation, University Park, PA (US)

( * ) Notice: Subject to any disclaimer, the term of this patent is extended or adjusted under 35 U.S.C. 154(b) by 0 days.

(21) Appl. No.: 09/429,675

(22) Filed: Oct. 28, 1999

Related US. Application Data

63 Continuation-in- art of a lication No. 08/834,327, ?led on P PP A r. 15 1997 now Pat. No. 5 990 283. P 7 7 7 7

60 Provisional a lication No. 60/105,906, ?led on Oct. 28, PP 1998.

nt. . ........................... .. ; ; 51 I C] 7 C07K 1/00 C07K 14/00 C07K 16/00; C07K 17/00

(52) US. Cl. ........................ .. 530/370; 530/372; 530/375; 530/376; 530/377; 530/378; 530/379; 435/183;

435/195; 435/209 (58) Field of Search ................................... .. 530/370, 372,

530/375, 376, 377—379; 435/183, 195, 209

(56) References Cited

U.S. PATENT DOCUMENTS

3,844,890 10/1974 Horikoshi et al. ................... .. 195/62

3,966,543 6/1976 Cayle et al. .. 162/158 4,004,976 1/1977 Isaac ............... .. 565/598

5,175,275 12/1992 Dobashi et al. 536/56 5,959,082 * 9/1999 Cosgrove et al. ................. .. 530/370

OTHER PUBLICATIONS

McQueen—Mason et al. Proc. Natl. Acad. Sci. USA, vol. 91, pp. 6574—6578, Jul. 1994.* Fry, Stephen C., Physiologia Plantarium 75:532—536, 1989. Patel, Praful, in “Biotechnology Applications and

Research”, eds. Cheremisinoff, RN. and Ouellette, R.P. pp. 534—562, Technomic Publishing Company, Inc., Lancaster, PA, 1985.

(List continued on next page.)

Primary Examiner—DWayne C. Jones Assistant Examiner—C. Delaceroix-Muirheid

(74) Attorney, Agent, or Firm—Zarley, McKee, Thomte, Voorhees & Sease

(57) ABSTRACT

Plant cell expansion is regulated by Wall relaxation and yielding, Which is thought to be catalyzed by elusive “Wall loosening” enZymes. By employing a reconstitution approach, We initially found that a crude protein extract from the cell Walls of groWing cucumber seedlings possessed the ability to induce the extension of isolated cell Walls. This activity Was restricted to the groWing region of the stem and could induce the extension of isolated cell Walls from various dicots and monocots, but Was less effective on grass coleoptile Walls. Sequential HPLC fractionation of the active Wall extract revealed tWo proteins With molecular masses of 29 and 30 kD, as measured by SDS-PAGE, associated With such activity. Each protein, by itself, could induce Wall extension Without detectable hydrolytic break doWn of the Wall. We proposed the name “expansins” for this class of proteins. Expansins have been isolated from various plant sources including oat, cucumber, broccoli, celery, tomato, cotton, cabbage, and corn, and also from snail and its feces. These proteins Weaken the intermolecular bonds betWeen plant Wall polysaccharides. They decrease the mechanical strength of commercial products made from polysaccharides, such as paper, and therefore present a novel approach in developing neW technologies in industries Which make use of such polysaccharides, such as in the paper industry, in the applications of polysaccharide gums and related products. These proteins moreover present a novel approach in the control of plant groWth.

15 Claims, 33 Drawing Sheets

Page 2: Enhancement of accessibility of cellulose by expansins

US 6,326,470 B1 Page 2

OTHER PUBLICATIONS

TaiZ, L., Ann. Rev. Plant Physiol. 35:585—657, 1984. Scopes, R.K., Chapter 3, Protein Puri?cation, Principles and Practice, 2nd Ed., pp. 41—54, Springer—Verlag, New York, 1987. Deutscher, M.P., Academic Press 1990, Guide to Protein Puri?cation, pp. 174—193. Fry, Stephen C., Current Biology 4(9):815—817, 1994. Cleland, R.E., Planta 170:379—385, 1987. Nishitani, K.and Torninaga R., J. Biol. Chem. 267(29):21058—21064, 1992. TaiZ, L., Proc. Natl. Acad. Sci. USA 91:7387—7389, Aug. 1994.

Shcherban, T.Y. et al., Proc. Natl. Acad. Sci. USA 92:9245—9249, Sep. 1995. Bayer, EA. et a1., Current Opinion in Structural—Biology 8:548—557, 1998. Cosgrove, D]. et al., Proc. Natl. Acad. Sci. USA 94:6559—6564, 1997. Li, Z—C et a1., Planta 191:349—356, 1993. McQueen—Mason, S. and Cosgrove, DJ, Proc. Natl. Sci. USA 911657416578, 1994. McQueen—Mason, S. and Cosgrove, DJ, Plant Physiol. 107:87—100, 1995. McQueen—Mason, S. et a1., Planta 190:327—331, 1993.

* cited by eXarniner

Page 3: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 1 0f 33 US 6,326,470 B1

Wall: Native

pH 6.8 to 4.5

i Boiled /

+ Apical Wall Proteins

l + Soluble Proteins Boned

+ Basal Wall Proteins Boiled

/l/'/ + Apical Wall Proteins

200 pm l—-—-|

Change in Length

Basal —— (Native)

1 I l l l I 0.0 0.5 1.0 1.5 2.0 2.5

Fig.1A

Page 4: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 2 0f 33 US 6,326,470 B1

Tomato

E :1.

8 I + Cucumber Pea N Wall Protein

Radish 5 . g Llly a» ._l

.E Union 0 Cl C ea .1‘:

/Barley I I I F

0 0 0 5 1.0 1 5 2.0

Fig.1B

Page 5: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 3 0f 33 US 6,326,470 B1

AU (280 nm) C: .A ‘w b

1

I .8; Activity (0/. m")

0-0 -- ...___.______._..--v'

I I T I T T I I I I I I I [j l I TTT T I I I I Ii

0 10 20 30 40 50

Retention Tlme (min)

Fig.2A

0.025"

0.020‘

0.015-1

AU (280 nm) omo-J

Activity (% hr") 0.005'1

0.000‘“

?l'ITrlTIlIlIIlp?lIIl'II 0 10 20 30 40

Retention Tame (min)

Fig.2B

Page 6: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 4 0f 33 US 6,326,470 B1

Mm} 1500.0 -—l>

am:

49.5 _"

32.5 —l'

215 “b

Fig.5

Page 7: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 5 0f 33 US 6,326,470 B1

pH 6.8 to 4.5

200 um b——t + C3 Proteins

Change in Length

4» Methanol Boiled Proteins

+ Water Boiled Proteins

0.0 0.5 1.0 1.5 2.0 2.5

Time (hr)

Fig.4A

Page 8: Enhancement of accessibility of cellulose by expansins

U S Patent Dec. 4, 2001 Sheet 6 6f 33 US 6,326,470 B1

I .5 a:

ml 0. :3 a.

63; m . c

' O

D.

Fig.4B Time (hr)

Control Chymotrypsin Papain 4»

p >

( ugw Lu?) e185 |eugj

Page 9: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 7 0f 33 US 6,326,470 B1

H/ '" (D

H u

_D m

LO. I .9

"' Q. L;

db ‘r

-- m

(km %) Mwwv

Page 10: Enhancement of accessibility of cellulose by expansins

US 6,326,470 B1 U.S. Patent Dec. 4,2001 Sheet 8 0f 33

300i f _ E ____ _. s1. g 3 _._.___._ Boiled S1 l 5 .......... __ Cellulase g

g1 200._ Control 1 ~ 0.» i' I’ .J 5 |

.s -‘ i q; Protein ,' g‘ 100.. I ., t ,I - .C 1/ O .n’ "r,

0 : : r

0 0.5 1.0 1.5 2-0

Time (h)

F|q.6A

0.20

w \\ a A Control \.\51 cr: 50.15 - \ c o .9 .1 ‘

'6 l’ x LL.

5-“ B C? o.1o~- s1 Boiled _ _ _ _ _ . _ _ _ ' '_

0.05 0

Log ("?me in s)

Fig.6B

Page 11: Enhancement of accessibility of cellulose by expansins
Page 12: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 10 0f 33 US 6,326,470 B1

0. T T l T I N

- C _

cm

0 If) _ L_/ _l-‘

[1.

P 555 » E

P=—'__"_"'"" O Q r\ _“ F. E o3

\ '- L:

\\ L P h r:

L -- \ cu m .

g‘ 0 ' If)

(l Q_ ,

i P’) 1 .- __ O ‘ ,

<n + i O.

' j I I i O O O O O O O O n N -'

(um) q bur-n u! 8E>UDL|Q

Page 13: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 11 0f 33 US 6,326,470 B1

0.6 v I T I . .

.0 (.40 I

.0 N I

HEAT-TREATED q

Change in Length (mm) D

.0 O L

Page 14: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 12 0f 33 US 6,326,470 B1

+10 mM DTT

1.0

B 6. 4 2 0 0 0 0 AEEV 59.3 E mango

Time (h)

Fig.9A

25

i. 02 2mm

Time (h)

Fig.9B

Page 15: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 13 0f 33 US 6,326,470 B1

- h w h n

0.8

5 A 2 0 0 0 AEEV £964 5 mmcmzo

Time (h)

Fig.1OA

20

p 5 1..

- > F O 5

1 2.5 22

2.5 2.0 1.0 1.5

Time (h)

09.105

0.5 0.0

Page 16: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 14 0f 33 US 6,326,470 B1

0.5

Add Cucumber oat

0.4 ~

0.3 *

0.2 ~

4

0.1 —

Boiled walls

I I T I I I I |

Change in Length (mm)

Add Cucumber cucumber protelns

Change in Length (mm) D l\)

Page 17: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 15 0f 33 US 6,326,470 B1

6_ CUCUMBER - A PROTEIN ______

i; 4_ CUCUMBER WALLS _ '5 .5 < p q

.5 5 2L. I _ Li

0 . I . 1 1 , ‘L l l . l

0102030405060 C3 Protein (pg-mL‘1)

Fig.12A

0:8 1 i I T

g CUCUMBER g 0.6- WAli * 5 CD

5 g’ 0.4 % C

2 0 0.2- -

MEAN RESPONSE (SE): OAT: 1.0 0.32 *

O0 CUCUMBER: 2.9 0.66

0.0 ‘ 0.5 ‘ 11.0 ' T5 ' 21.0 ‘ 2.5 Time (h)

Fig.12B

Page 18: Enhancement of accessibility of cellulose by expansins
Page 19: Enhancement of accessibility of cellulose by expansins

U.S. Patent Dec. 4, 2001 Sheet 17 0f 33 US 6,326,470 B1

(L_u~%) All/013v

Page 20: Enhancement of accessibility of cellulose by expansins

U.S. Patent

Activity (pm/min) Absorbance (280 nm)

Dec. 4, 2001 Sheet 18 0f 33 US 6,326,470 B1

3

2d \ 1 — \ ‘

OJ U -1_J

I I I I If I l l

O 10 2O 3O 4O Fractions

Fig.15A

3

2_-.

1_ \

0" w‘ -1 | T T ' I I I

0 1O 2O 30 4O Fractions

Fig.15B

Page 21: Enhancement of accessibility of cellulose by expansins
Page 22: Enhancement of accessibility of cellulose by expansins
Page 23: Enhancement of accessibility of cellulose by expansins
Page 24: Enhancement of accessibility of cellulose by expansins
Page 25: Enhancement of accessibility of cellulose by expansins
Page 26: Enhancement of accessibility of cellulose by expansins
Page 27: Enhancement of accessibility of cellulose by expansins
Page 28: Enhancement of accessibility of cellulose by expansins
Page 29: Enhancement of accessibility of cellulose by expansins
Page 30: Enhancement of accessibility of cellulose by expansins
Page 31: Enhancement of accessibility of cellulose by expansins
Page 32: Enhancement of accessibility of cellulose by expansins
Page 33: Enhancement of accessibility of cellulose by expansins
Page 34: Enhancement of accessibility of cellulose by expansins
Page 35: Enhancement of accessibility of cellulose by expansins
Page 36: Enhancement of accessibility of cellulose by expansins
Page 37: Enhancement of accessibility of cellulose by expansins
Page 38: Enhancement of accessibility of cellulose by expansins
Page 39: Enhancement of accessibility of cellulose by expansins
Page 40: Enhancement of accessibility of cellulose by expansins
Page 41: Enhancement of accessibility of cellulose by expansins
Page 42: Enhancement of accessibility of cellulose by expansins
Page 43: Enhancement of accessibility of cellulose by expansins
Page 44: Enhancement of accessibility of cellulose by expansins
Page 45: Enhancement of accessibility of cellulose by expansins
Page 46: Enhancement of accessibility of cellulose by expansins
Page 47: Enhancement of accessibility of cellulose by expansins
Page 48: Enhancement of accessibility of cellulose by expansins
Page 49: Enhancement of accessibility of cellulose by expansins
Page 50: Enhancement of accessibility of cellulose by expansins
Page 51: Enhancement of accessibility of cellulose by expansins
Page 52: Enhancement of accessibility of cellulose by expansins
Page 53: Enhancement of accessibility of cellulose by expansins
Page 54: Enhancement of accessibility of cellulose by expansins