ex situ conservation of cwr species in the nordic region€¦ · among sub-collections 0% 20% 40%...
TRANSCRIPT
Ex situ conservation of CWR
species in the Nordic region
Anna Palmé
Vilnius 2016-09-21
Nordic conservation of plant
genetic resources
• Strong cooperation
among the Nordic
countries in this field
• Combination of Nordic
and national efforts
Finnish GR
Norwegian GR
Swedish GR
Danish GR
Icelandic GR
Inner circle: Vegetatively
propagated crops (and on farm)
Outer circle: Seed propagated crops
NGB
NGB
SE-NP
NO-
NP DK-
NP
FI-NP IS-NP
NGB
NGB
NGB
Ex situ conservation responsibility of crop genetic resources in
the Nordic region is divided between NordGen (NGB) and the
national programs or equivalent (NPs)
National genetic
resources (GR)
Nordic genetic resources
Meetings
Projects
Agreements
Shared data base
Finnish
NP
NordGen
Swedish
NP
Danish
“NP”
Islandic
“NP”
Norwegian
NP
Linking actors and information
for efficient conservation
NordGen responsible for
facilitating cooperation and
providing the IT framework
Agreement on how to share
responsibility
• “Responsibilities and tasks of
NordGen and the Nordic
national programs for plant
genetic resources - A
clarification”
– Clear for crops
– No agreement for CWR
Finnish GR
Norwegian GR
Swedish GR
Danish GR
Icelandic GR
Division of conservation responsibility of CWR genetic
resources in the Nordic region remains to be determined: a draft
suggestion from 2012 divides responsibility between the national programs (NPs),
national authorities for nature protection (NA) and NordGen (NGB)
NGB
NGB
SE-NP
NO-
NP DK-
NP
FI-NP IS-NP
NGB
NGB
NGB
IS-NA
DK-
NA
SE-NA
NO-
NA
FI-NA
Inner circle:
Ex situ, seed
propagated
crops
Outer circle:
in situ in wild
habitats
Middle circle:
on-farm/in
cultivated
landscapes
Agreements
National genetic
resources (GR)
Nordic actors (ex situ conservation of CWR)
• NordGen – regional gene bank
• National programmes
– (National field gene banks)
• National gene banks for
threatened species (Norway,
Finland)
• Botanic gardens
NordGen
• Governed by the Nordic Council of Ministers – Denmark, Finland, Iceland, Norway, Sweden
• Three sections: Plants, Farm animals and Forest
trees
• Regional plant gene bank for the Nordic countries
– Nordic Gene Bank: established in 1979
– Converted to NordGen Plants January 1, 2008
NordGen and CWR
• NordGen´s mandate
includes conservation of
CWR – but the extent to
which CWRs should be
conserved at NordGen is
not clearly defined
Breeding and research
47%
Other 4%
Pending 2%
Cultivars 12%
Landrace 14%
Wild and semi-wild
21%
NordGen´s collection
Wild accessions at NordGen
Hordeum
Festuca
Barbarea
Phleum Poa
Trifolium
Dactylis
Agrostis
Phalaris
Elymus Lactuca
Lolium
Papaver Alopecurus
Allium
Carum
Deschampsia
Pisum
Bromus
Leymus
Angelica Ballota
Malva
Verbascum Genera <20 acc
The importance of wild material varies
among sub-collections
0%
20%
40%
60%
80%
100%
Subcollections at NordGen
Breeding and research
Pending
Cultivars
Landrace
Wild and semi-wild
Other
Two conservation approaches for
CWRs at NordGen
• Long-term conservation
– Storage in 3 locations
– Regular monitoring
– Regenerated when needed
– Distributed to users
• Short-term conservation
– Storage in 2 locations
– No monitoring
– No regeneration
– Distributed to users
Flowchart long-
term
conservation
0%
10%
20%
30%
40%
Breedingand
research
Cultivars Wild andsemi wild
Landrace Other Pending
No
. acc
essi
on
s Deliveries excluding hobby growers
0%
10%
20%
30%
40%
50%
60%
Breedingand
research
Cultivars Wild andsemi wild
Landrace Other Pending
No
. acc
essi
on
s
Deliveries to all users, 2010-2015
Wild accessions are ordered and used
About 11% of the
accessions delivered from
NordGen are classified as
wild or semi-wild
How well is the Nordic CWR diversity covered
by ex situ conservation at NordGen?
• About 6 900 wild or semi-wild
accessions conserved at NordGen
from 360 different taxa
• A few priority CWR taxa are very
well covered. Focused sampling with
the aim to cover the Nordic region.
• No systematic efforts have been
made to sample a larger number of
CWRs (Danish NP sampled priority taxa
2014 and 2015)
• National priority taxa
– Finland: 209, 8 at NordGen*
– Norway: 204, 24 at NordGen*
Collection sites for timothy
accessions conserved at
NordGen
Phleum pratense
*Ref. priority taxa: Philips et al 2016 and Fitzgerald 2013
Ex situ conservation of CWRs
- What does it cost?
Tasks Rough cost estimates
Sampling (or resampling) 100 Euro/accession
Documentation 25 Euro/accession
Threshing, Seed cleaning
Germination testing,
packing, tgw
60 Euro/accession
Storage 1 Euro/accession
Distribution 15 Euro/distribution
(regeneration) (400 Euro/accession)
Low estimates:
Assume that the
equipment, IT
infrastructure,
administration and
trained staff are all in
place…
“Back-of-the-envelope” calculation
Example: 209 species from 5 locations (Finnish national strategy 209 prioritised taxa)
One sampling, no regeneration, 5 distributions: ~ 270 000 EUR (every 10-50 years)
One sampling, one regeneration, 5 distributions: ~ 690 000 EUR (every 10-50 years)
• Strengths
– facilitates use of genetic resources
– safety
• not threatened by climate change, habitat loss
or pollution
• duplication
• Weaknesses
– only a sample of the variation in the
natural population
– regeneration can lead to loss of genetic
variation and change in the genetic
makeup
– no adaptation/evolution
– high costs
Ex situ conservation
What role(s) should the ex situ approach have for
conservation of CWRs?
• When should ex situ conservation be the
main conservation approach?
• How and when should ex situ
conservation serve as back-up to in situ
conservation?
• Should ex situ storage be used as a way
to facilitate the use of the material?
• What roles should the different ex situ
actors have?
• How should ex situ and in situ
conservation be integrated in an efficient
way?
Thank you!