fret biol 497 presentation

9
Förster Resonance Energy Transfer of Cerulean and Venus Fluorescent Proteins In Live Drosophila melanogaster Eyes Saki Mihori Dr. Donald Ready’s Lab

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Page 1: FRET BIOL 497 Presentation

Förster Resonance Energy Transfer of Cerulean and Venus Fluorescent Proteins In Live Drosophila melanogaster Eyes

Saki MihoriDr. Donald Ready’s Lab

Page 2: FRET BIOL 497 Presentation

What is FRET• Physical phenomenon used in

biology to observe and quantify protein-protein interaction

• Donor protein- Cerulean Fluorescent Protein (CFP)

• Acceptor protein- Venus Fluorescent Protein (YFP)

• How FRET works– Energy absorbed by donor is

transferred to acceptor, which then fluoresces

• Only works if distance between proteins is within 10nm, which is the realm of protein-protein interaction distance.

"FRET (Fluorescence Resonance Energy Transfer)." Semrock. N.p., n.d. Web. <https://www.semrock.com/fret.aspx>.

Page 3: FRET BIOL 497 Presentation

Model Organism: Drosophila melanogaster

• 3 transgenic flies made by Kirk Mecklenburg• C5V

– Cerulean- 5 amino acid linker-Venus– Spacing of 5.0 nm

• C17V– Spacing of 5.3 nm

• C32V– Spacing of 5.7 nm

• Established FRET efficiency standards:– Vogel

• 43% C5V• 38% C17V• 31% C32V

– Roszik• 45% C5V• 37.3% C17V• 29.9% C32V

Page 4: FRET BIOL 497 Presentation

Procedure• Microscope: Nikon

Eclipse TE200 – Dual View camera

• 2 channel imaging system

• Simultaneous view of CFP (donor) channel and YFP (acceptor) channel

– Cooled CCD camera• Fluorescence

microscopy applications

Page 5: FRET BIOL 497 Presentation

MetaMorph• Image analysis and microscopy automation

software• Split view

– Simultaneously record CFP and YFP• Acceptor emission on donor excitation is raw

FRET– But has contamination

• Isolate donor (CFP), transfer (FRET) and acceptor (YFP) image

• Using FRET app, correct FRET image by subtract spectral bleed through or artifactual contributions to raw FRET

• Obtain ratiometric image of FRET image of corrected FRET over donor

• Warmer colors indicate higher FRET efficiency• Only gives indication of comparison of what

the FRET efficiency is (no quantitative value)

L to R: C5V, C17V, C32V

Page 6: FRET BIOL 497 Presentation

RiFRET• ImageJ plugin• Calculates FRET efficiency pixel by

pixel• Subtact background for noise on 3

images, set threshold so only calculate FRET on eye

• False coloration to help identify FRET efficiency

L to R: C5V, C17V, C32V

Histogram:Isolated peaks at mean ratiometric values of different constructs

Page 7: FRET BIOL 497 Presentation

Conclusion• Established FRET efficiency standards:

– Vogel• 43% C5V• 38% C17V• 31% C32V

– Roszik• 45% C5V• 37.3% C17V• 29.9% C32V

• My values• 44.5% C5V• 37.3% C17V• 29.2% C32V

Page 8: FRET BIOL 497 Presentation

Conclusion

• Demonstrated accurately measured FRET in Drosophila and calibrated FRET standards

• Next step: work with actin-CFP and actin-YFP– Blue light

Page 9: FRET BIOL 497 Presentation

Questions?