rabbit ears is a second-whorl repressor of agamous that maintains spatial boundaries in

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RABBIT EARS is a second-whorl repressor of AGAMOUS that maintains spatial boundaries in Arabidopsis flowers Beth A. Krizek 1,* , Michael W. Lewis 1,† and Jennifer C. Fletcher 2 1 Department of Biological Sciences, University of South Carolina, 700 Sumter Street, Columbia, SC 29208, USA, and 2 Department of Plant and Microbial Biology, University of California, Berkeley and USDA Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA Received 5 September 2005; accepted 13 October 2005. * For correspondence (fax 803-777-4002; e-mail [email protected]). Present address: Department of Biology, University of North Carolina, Chapel Hill, NC 27599, USA. Summary The RABBIT EARS (RBE) gene has been identified as a regulator of petal development in Arabidopsis thaliana. We find that second-whorl petals in rbe mutants can be replaced with staminoid organs, stamens or filaments and that some rbe flowers have increased numbers of sepals and exhibit fusion of sepals. We show that these rbe defects are due to AGAMOUS (AG) misexpression in the second whorl. Consistent with its role in maintaining the spatial boundary of AG expression, rbe enhanced the second-whorl defects present in ap2-1, lug-1 and clf-2 mutants. In the development of second-whorl organs, RBE acts in the same pathway and downstream of UNUSUAL FLORAL ORGANS (UFO). Enhanced first-whorl organ fusion in ap2-2 rbe-3, ant-4 rbe-3 and cuc2-1 rbe-3 double mutants supports an additional role for RBE in organ separation. RBE thus acts to maintain two different types of spatial boundaries in young flowers: boundaries between organ primordia within a whorl and boundaries of homeotic gene expression between whorls. Keywords: AGAMOUS, boundaries, cell division, floral patterning, UNUSUAL FLORAL ORGANS (UFO). Introduction Arabidopsis thaliana flowers consist of four whorls of or- gans arranged in a characteristic pattern. Four first-whorl sepals arise in a cruciform pattern, with four second-whorl petals arising between the sepals. The third whorl consists of six stamens: four tall medial stamens and two short lateral stamens. Two congenitally fused carpels make up the inner fourth-whorl gynecium. Organ primordia acquire their dis- tinct identities through the region-specific activities of the ABC class genes (reviewed in Jack, 2004). Sepal identity is specified by the class A genes APETALA1 (AP1) and APET- ALA2 (AP2). Petal identity is specified by the combined activity of the class A genes and the class B genes APETALA3 (AP3) and PISTILLATA (PI). Stamen identity is specified by the combined activity of the class B genes and the class C gene AGAMOUS (AG). Carpel identity is conferred by AG activity. The SEPALLATA genes act together with the A, B and C class genes to specify sepal, petal, stamen and carpel identities in the flower (Ditta et al., 2004; Pelaz et al., 2000). In addition to specifying the identity of second-whorl organs, AP1 and AP2 are also required for the initiation of these organs. In ap1 and ap2 mutants, second-whorl organ primordia are not initiated. Because organ initiation is at least partly restored in ap2 ag and ap1 ag double mutants, AG is responsible for the absence of these organs and has been proposed to act as a suppressor of growth in the second whorl (Bowman et al., 1991b, 1993). AG is misex- pressed in the outer two floral whorls of ap2, resulting in the conversion of first-whorl sepals into carpels in addition to the absence of second-whorl organ primordia (Drews et al., 1991). Besides AP2, other genes act to repress AG expres- sion in the first and second whorls including LEUNIG (LUG), SEUSS (SEU), CURLY LEAF (CLF), STERILE APETALA (SAP), BELLRINGER (BLR) and AINTEGUMENTA (ANT; Bao et al., 2004; Byzova et al., 1999; Franks et al., 2002; Goodrich et al., 1997; Krizek et al., 2000; Liu and Meyerowitz, 1995; Liu et al., 2000). Other genes that promote the initiation and development of second-whorl organ primordia include UNUSUAL FLOR- AL ORGANS (UFO), PETAL LOSS (PTL), RABBIT EARS (RBE) and ROXY1. One class of ufo alleles exhibit an almost ª 2006 The Authors 369 Journal compilation ª 2006 Blackwell Publishing Ltd The Plant Journal (2006) 45, 369–383 doi: 10.1111/j.1365-313X.2005.02633.x

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RABBIT EARS is a second-whorl repressor of AGAMOUS thatmaintains spatial boundaries in Arabidopsis flowers

Beth A. Krizek1,*, Michael W. Lewis1,† and Jennifer C. Fletcher2

1Department of Biological Sciences, University of South Carolina, 700 Sumter Street, Columbia, SC 29208, USA, and2Department of Plant and Microbial Biology, University of California, Berkeley and USDA Plant Gene Expression Center, 800

Buchanan Street, Albany, CA 94710, USA

Received 5 September 2005; accepted 13 October 2005.*For correspondence (fax 803-777-4002; e-mail [email protected]).†Present address: Department of Biology, University of North Carolina, Chapel Hill, NC 27599, USA.

Summary

The RABBIT EARS (RBE) gene has been identified as a regulator of petal development in Arabidopsis thaliana.

We find that second-whorl petals in rbemutants can be replaced with staminoid organs, stamens or filaments

and that some rbe flowers have increased numbers of sepals and exhibit fusion of sepals. We show that these

rbe defects are due to AGAMOUS (AG) misexpression in the second whorl. Consistent with its role in

maintaining the spatial boundary of AG expression, rbe enhanced the second-whorl defects present in ap2-1,

lug-1 and clf-2 mutants. In the development of second-whorl organs, RBE acts in the same pathway and

downstream of UNUSUAL FLORAL ORGANS (UFO). Enhanced first-whorl organ fusion in ap2-2 rbe-3, ant-4

rbe-3 and cuc2-1 rbe-3 doublemutants supports an additional role forRBE in organ separation.RBE thus acts to

maintain two different types of spatial boundaries in young flowers: boundaries between organ primordia

within a whorl and boundaries of homeotic gene expression between whorls.

Keywords: AGAMOUS, boundaries, cell division, floral patterning, UNUSUAL FLORAL ORGANS (UFO).

Introduction

Arabidopsis thaliana flowers consist of four whorls of or-

gans arranged in a characteristic pattern. Four first-whorl

sepals arise in a cruciform pattern, with four second-whorl

petals arising between the sepals. The third whorl consists

of six stamens: four tall medial stamens and two short lateral

stamens. Two congenitally fused carpels make up the inner

fourth-whorl gynecium. Organ primordia acquire their dis-

tinct identities through the region-specific activities of the

ABC class genes (reviewed in Jack, 2004). Sepal identity is

specified by the class A genes APETALA1 (AP1) and APET-

ALA2 (AP2). Petal identity is specified by the combined

activity of the class A genes and the class B genesAPETALA3

(AP3) and PISTILLATA (PI). Stamen identity is specified by

the combined activity of the class B genes and the class C

gene AGAMOUS (AG). Carpel identity is conferred by AG

activity. The SEPALLATA genes act together with the A, B

and C class genes to specify sepal, petal, stamen and carpel

identities in the flower (Ditta et al., 2004; Pelaz et al., 2000).

In addition to specifying the identity of second-whorl

organs, AP1 and AP2 are also required for the initiation of

these organs. In ap1 and ap2 mutants, second-whorl organ

primordia are not initiated. Because organ initiation is at

least partly restored in ap2 ag and ap1 ag double mutants,

AG is responsible for the absence of these organs and has

been proposed to act as a suppressor of growth in the

second whorl (Bowman et al., 1991b, 1993). AG is misex-

pressed in the outer two floral whorls of ap2, resulting in the

conversion of first-whorl sepals into carpels in addition to

the absence of second-whorl organ primordia (Drews et al.,

1991). Besides AP2, other genes act to repress AG expres-

sion in the first and second whorls including LEUNIG (LUG),

SEUSS (SEU), CURLY LEAF (CLF), STERILE APETALA (SAP),

BELLRINGER (BLR) and AINTEGUMENTA (ANT; Bao et al.,

2004; Byzova et al., 1999; Franks et al., 2002; Goodrich

et al., 1997; Krizek et al., 2000; Liu and Meyerowitz, 1995;

Liu et al., 2000).

Other genes that promote the initiation and development

of second-whorl organ primordia include UNUSUAL FLOR-

AL ORGANS (UFO), PETAL LOSS (PTL), RABBIT EARS (RBE)

and ROXY1. One class of ufo alleles exhibit an almost

ª 2006 The Authors 369Journal compilation ª 2006 Blackwell Publishing Ltd

The Plant Journal (2006) 45, 369–383 doi: 10.1111/j.1365-313X.2005.02633.x

complete loss of second-whorl organs (Durfee et al., 2003).

Since UFO encodes an F-box protein that is a component of

an SCF complex, it has been proposed that UFO may target

for degradation a repressor of whorl-two cell proliferation

(Durfee et al., 2003; Samach et al., 1999). In ptl mutants,

second-whorl petals can be absent, tubular, staminoid or

filamentous in appearance and petal orientation is some-

times altered (Griffith et al., 1999). PTL encodes a trihelix

transcription factor that is expressed in four domains

corresponding to regions between initiating sepal primordia

(Brewer et al., 2004).

rbe mutants have been described previously as having

alterations in petal morphology, reduced numbers of petals

and conversion of petals to filaments (Takeda et al., 2003).

RBE encodes a SUPERMAN (SUP)-like zinc-finger protein

that is expressed in second-whorl cells from floral stages 3–6

(Takeda et al., 2003). Recently described roxy1 mutants

show reductions in petal number and alterations in petal

morphology similar to ptl and rbe mutants (Xing et al.,

2005). ROXY1 encodes a glutaredoxin that may post-trans-

lationally regulate proteins involved in petal development.

UFO has been proposed to function downstream of AP1 in

whorl-two proliferation (Durfee et al., 2003) while RBE has

been proposed to function downstream of both AP1 and PTL

(Takeda et al., 2003).

Several genes involved in maintaining boundaries within

developing flowers have been identified. SUP has been

proposed to maintain a boundary between the third and

fourth whorls of the flower (Sakai et al., 1995). Mutations in

SUP result in misexpression of the class B gene AP3 in the

center of the flower and the formation of additional stamens

at the expense of fourth-whorl carpels (Bowman et al.,

1992). SUP may prevent expansion of AP3 expression into

the fourth whorl by regulating the balance of cell division in

the third and fourth whorls (Sakai et al., 1995).

The development of discrete organ primordia in the first

and third whorls of Arabidopsis flowers requires the activity

of the CUP-SHAPED COTYLEDON (CUC) genes. Fusion

between sepals and between stamens can occur in cuc1

and cuc2 single mutants but is more common and more

dramatic in cuc1 cuc2 double mutants (Aida et al., 1997).

Consistent with their roles in the establishment of bound-

aries, CUC1 and CUC2 are expressed between floral whorls

and between individual organ primordia within a whorl

(Ishida et al., 2000; Takada et al., 2001). Recently, PTL has

been shown to repress growth between sepal primordia,

thus contributing to the formation of boundaries between

these organs (Brewer et al., 2004). Sepals are sometimes

fused in ptlmutants and more often fused in ptl cuc1 and ptl

cuc2 double mutants (Brewer et al., 2004).

Our work described here reveals that RBE patterns young

flowers by maintaining two different types of boundaries.

RBE promotes second-whorl development by maintaining a

boundary between the second and third whorls of the flower

that restricts AG expression to whorls three and four.

Although the initial boundary of AG expression may be

established independently of RBE, the continued existence

of this boundary requires RBE. Our data also suggest that

RBE acts to maintain a second type of boundary, one that

separates individual sepal primordia within the first whorl.

Molecular and genetic evidence suggests that UFO and RBE

function in the same pathway to promote the development

of second-whorl organs and that UFO is required for normal

levels of RBE expression. In addition, we describe the

expression pattern of RBE during the development of

the ovule and show that RBE also acts to regulate growth

of the outer integument.

Results

Identification of a new rbe allele

We identified a mutant displaying loss of petal identity and

reduced fertility that is allelic to rabbit ears (rbe; Takeda

et al., 2003). This allele, rbe-3, contains a single nucleotide

change (C to T) within RBE that converts Q106 to a stop

codon (Figure 1a) and fails to complement the rbe-2 T-DNA

insertion allele. rbe-1 and rbe-2 had been described previ-

ously as having defects in development of the second whorl

of the flower. Second-whorl petals were often missing,

reduced in size, altered in shape (described as spoon-

shaped) or replaced by filaments (Takeda et al., 2003).

rbe-3 mutants have disrupted development of first-whorl

organs

We noticed several phenotypes in rbe-3 that had not been

described previously for the other two alleles. rbe-3 flowers

sometimes producemore than four sepals (Figure 1b–d) and

exhibit fusion between adjacent sepals (Figures 1d and 2a).

More than four sepals were observed in approximately 7% of

rbe-3 flowers, while some degree of sepal fusion was ob-

served in 35% of flowers (corresponding to 10% of all sepals,

Table 1). In rbe-3 flowers with more than four sepals, the

‘extra’ sepal was thinner than the remaining four sepals

(Figure 1c). In some cases, one of the adjacent sepals was

also somewhat reduced in width. Sepal fusion can occur in

the absence of more than four sepals. Sepal fusion was

observed most often at the base of these organs (Figure 2a)

and more rarely along their entire length (Figure 1d). We

measured the width of mature sepals to determine whether

sepal fusionmight be due to wider organs. rbe-3 sepals were

12% wider than Landsberg erecta (Ler) sepals at maturity

(Table 1).

Examination of rbe-3 flowers by scanning electron micr-

oscopy (SEM) suggests that sepal fusion in rbe-3 mutants is

due to altered patterns of growth within sepal primordia

after initiation. During stage 3 of flower development, four

370 Beth A. Krizek et al.

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

sepal primordia are initiated in normal positions in rbe-3

mutants (Figure 2b,c). However, early in stage 4 some rbe-3

sepal primordia have undergone extra growth along their

margins and appear wider than normal (Figure 2d,e). The

tips of these primordia were sometimes not located in the

middle of the primordia and the two sides of the primordia

were not symmetrical (Figure 2e). Continued uneven growth

of these primordia became more pronounced during devel-

opment. By stage 5, an organ that had presumably initiated

as a single primordium now appeared as two fused prim-

ordia (Figure 2f) or two closely spaced and partially fused

primordia (Figure 2g).

Petals can be replaced by staminoid organs and filaments

in rbe-3

In rbe-3 flowers, second-whorl petals are often reduced in

size or altered in appearance. Petals with staminoid char-

acteristics, stamens, filaments or the absence of organs can

all be found in the second whorl of rbe-3 mutants (Table 2;

Figures 1e–g and 2h–k). In early flowers, the majority of

second-whorl organs were petals. Sometimes, the petals

were reduced in size or had an altered appearance with the

margins of the petal blade folded in toward the center or the

petal bent over (Figure 1g). Organs were classified as

staminoid based on their overall appearance. Scanning

electron microscopy of these organs indicated that some

were mosaic organs consisting of both petal-like (Pe) and

stamen-like (St) cells (Figure 2l) while others had epidermal

cells with morphologies intermediate between that of petals

and stamens (Figure 2m). The defects in petal development

increased acropetally in rbe-3, with older flowers more likely

to have filaments in the second whorl (Table 2, Figure 1f) or

to lack second-whorl organs. More severe defects (i.e. the

replacement of petals by filaments or the absence of organs)

were observed in the two positions closest to the inflores-

cence meristem. This position effect has been described

previously for rbe-1 and rbe-2 (Takeda et al., 2003).

The development of second-whorl organs was examined

in rbe-3 mutants by SEM. Second-whorl organs, when

Figure 1. Sequence alteration in the rbe-3 allele and phenotype of rbe-3 flowers.

(a) The cDNA and predicted amino acid sequence of RBE. The zinc finger is highlighted in blue and the EAR-likemotif is highlighted in pink. The sequence changes in

rbe-3 and the previously described rbe-1 and rbe-2 alleles (Takeda et al., 2003) are shown. rbe-1 and rbe-3 introduce premature stop codons. The rbe-2 allele has a

deletion of the underlined nucleotides.

(b) Wild-type Ler flower.

(c) rbe-3 flower with five sepals. One sepal is thinner than the others (arrow).

(d) rbe-3 flower in which two sepals are fused (arrow).

(e) rbe-3 flower with a staminoid petal (arrow) in the second whorl.

(f) rbe-3 flower with a filament (arrow) in the second whorl.

(g) Second-whorl organs present in rbe-3 flowers.

RBE regulates floral boundaries 371

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

Figure 2. Scanning electron micrographs of rbe-3.

(a) rbe-3 flower in which two sepals are fused at their base (arrow).

(b) Stage 3 Ler flower.

(c) Stage 3 rbe-3 flower.

(d) Ler inflorescence.

(e) rbe-3 inflorescence. Arrows point to regions of abnormal growth in stage 4 sepal primordia.

(f) Close-up of a rbe-3 stage 5 flower in which one sepal primordium is split at its tip (arrow).

(g) Close-up of a rbe-3 stage 5 flower with five sepal primordia. The arrow points to a small sepal primordium located close to a medial sepal.

(h) Ler flower in which the sepals have been removed. Second-whorl petals are visible.

(i) rbe-3 flower containing a second-whorl staminoid organ (arrow).

(j) rbe-3 flower with a second-whorl staminoid petal (arrow).

(k) rbe-3 mosaic second-whorl organ.

(l) Close-up of organ in (k) showing stamen-like (St) and petal-like (Pe) cells.

(m) Epidermal cells present on a rbe-3 second-whorl organ.

(n) Stage 9 Ler flower.

(o) Stage 9 rbe-3 flower. The second-whorl organ primordia (arrows) are smaller than those of the wild type.

(p) Stage 9 rbe-3 flower containing a filament (arrow) in the second whorl.

(q) Ler stage 2-V ovules.

(r) rbe-3 stage 2-V ovules.

(s) Mature Ler ovules.

(t) Mature rbe-3 ovules. The outer and inner integuments (oi and ii) do not fully enclose the nucellus.

(u) Ler ovule showing the narrow width of the outer integument (oi) upon completion of growth around the nucellus.

(v) The outer integument (oi) is not tightly appressed to the inner integument (ii) in some rbe-3 ovules (arrow).

Scale bars correspond to 500 lm in (a), (h) and (i), 200 lm in (j) and (k), 100 lm in (n)–(p), (s) and (t), 50 lm in (d)–(g), (q), (r), (u) and (v), 20 lm in (b), (c) and (l) and

10 lm in (m).

Table 1 Sepal width and extent of sepalfusion in Ler, rbe-3, cuc2-1 and cuc2-1 rbe-3 flowers

GenotypeSepal width(mm)

Fraction of total sepal length exhibiting fusion

Total no. offlowers counted 0 <1/4 1/4–1/2 1/2–3/4 3/4–1

Ler 0.66 � 0.069rbe-3 0.74 � 0.095 100 89.8 9.75 0.5 0.0 0.0cuc2-1 0.68 � 0.065 100 62.0 19.2 13.2 4.2 1.5cuc2-1 rbe-3 0.69 � 0.076 128 10.9 26.6 38.1 17.0 7.4

372 Beth A. Krizek et al.

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

initiated in rbe-3 mutants, had a normal appearance. How-

ever, by stage 9 of flower development differences in the

overall size and shape of wild-type and rbe-3 second-whorl

organs were apparent (Figure 2n–p). Second-whorl rbe-3

organs were not as wide as wild-type petals (Figure 2o) and

in some cases remained radially symmetric rather than

expanding laterally and becomingflat (Figure 2p). To investi-

gate whether the defect in second-whorl organ development

might be the result of smaller floralmeristems, wemeasured

the diameter of stage 3 floral meristems in Ler and rbe-3

flowers. No difference in floralmeristemwidthwas observed

(35.2 � 2.81 lM in Ler versus 35.3 � 4.85 lM in rbe-3).

Because several rbe-3 phenotypes (extra sepals, fusion of

first-whorl sepals and replacement of petals by staminoid

organs) had not been reported for rbe-1 or rbe-2 (Takeda

et al., 2003), we examined rbe-2 to investigate whether our

observations were allele-specific. We found first- and sec-

ond-whorl defects in the rbe-2 allele similar to those

described here for rbe-3, indicating that our observations

are not particular to the rbe-3 allele.

rbe-3 mutants show defects in integument growth

To better define the reduced fertility of rbe-3 mutants, we

examined ovule development by SEM. Ovule development

was normal up to stage 2-V (Schneitz et al., 1995) with both

integuments initiating from the chalazal region and growing

toward the nucellus (Figure 2q,r). However, later growth of

the outer integument in rbe-3 mutants is abnormal with

premature cessation of growth. The extent of growth of the

outer integument in rbe-3 is somewhat variable, but in most

cases the outer integument does not grow to surround the

nucellus (Figure 2s,t). In addition, the outer integument is

not tightly appressed to the inner integument (Figure 2u,v).

RBE is expressed in petals and the integuments of ovules

Previously, RBE expression has been described in floral or-

gans (Takeda et al., 2003). RBE mRNA was detected in four

distinct domains during stages 3–6 of flower development.

During stages 3 and 4, the RBE expression domain corres-

ponded to cells that will give rise to petal primordia. RBE

was expressed in petal primordia during stage 6 but not

during later stages of petal development.We have examined

RBE expression in both floral organs and ovules. We found a

similar pattern of expression in young flowers (Figure 3b,d)

as described previously. However, we also detected RBE

expression in late stage 2 flowers (Figure 3a). In some stage

3 flowers, RBE mRNA was detected in a cup-shaped domain

(Figure 3c). In ovules, RBE expression was detected in the

center of elongated primordia at the time of integument

initiation (Figure 3e). RBE mRNA was initially detected in

both the inner and outer integument (Figure 3e,f). As the

integuments grow around the nucellus, RBE expression is

maintained in the inner integument but not the outer

integument (Figure 3g,h). Prior to its disappearance in the

outer integument, RBE becomes confined to the adaxial side

of the outer integument (Figure 3g).

AG activity is required for the first- and second-whorl

defects in rbe-3 flowers

Because rbe second-whorl organs are sometimes converted

to staminoid petals or stamens, we examined the expression

pattern of the class C gene AG in rbe-3 flowers. AG expres-

sion was initiated normally in the center of stage 3 rbe-3

floral meristems (Figure 4a,b). However, misexpression of

AG in some rbe-3 second-whorl organs was apparent at

stage 6 (Figure 4c,d) and continued to stage 12 of flower

development (Figure 4e–g). In some cases, AG mRNA was

detected throughout the second-whorl organ (Figure 4d)

while in other cases AG mRNA was predominantly localized

to the adaxial epidermal layer of the second-whorl organ

(Figure 4f,g). AG expression was detected in second-whorl

organs that appeared to develop as filaments (Figure 4g) as

well as those that developed into staminoid petals (Fig-

ure 4f). We examined AG expression in ovules of rbe-3 to

see whether the defect in growth of the outer integument

might result from AG misexpression. AG mRNA was found

in a normal pattern in rbe-3 ovules, first appearing

throughout ovule primordia and later becoming restricted to

the endothelium (Figure 4h,i). This expression pattern mat-

ches that described earlier for AG (Bowman et al., 1991a).

To determine whether the rbe second-whorl defect was

due entirely to ectopic AG activity, we made an ag-1 rbe-3

Table 2 Organs present in Ler and rbe-3 flowers

WhorlOrganidentity

Ler rbe-3

1–30a

(114)b1–30a

(150)b1–10a

(50)b11–20a

(50)b21–30a

(50)b

1 Se 4.00 4.05 4.04 4.02 4.082 Pe 4.00 1.36 2.34 1.16 0.58

Small Pe 0.07 0.06 0.04 0.10Folded Pe 0.29 0.28 0.28 0.30Bent Pe 0.03 0.04 0.06St/Pe 0.21 0.22 0.24 0.16Pe/St 0.18 0.02 0.34 0.18St 0.09 0.06 0.10 0.10Filament 1.08 0.76 1.08 1.40Pe/fil 0.13 0.02 0.06 0.30Total 4.00 3.44 3.76 3.34 3.18

3 St 5.82 5.93 5.92 5.9 5.96Pe/St 0.04 0.04 0.06 0.04Total 5.82 5.97 5.96 5.96 6.00

4 Ca 2.00 2.02 2.02 2.00 2.04

aPosition of flowers on the inflorescence.bTotal number of flowers counted.Se, sepal; Pe, petal; St, stamen; Ca, carpel; St/Pe, staminoid petal;Pe/St, petaloid stamen; Pe/fil, petaloid filament.

RBE regulates floral boundaries 373

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

Figure 3. RBE expression in Ler flowers and ovules.

(a) RBE expression in a late stage two flower.

(b, c) RBE expression in stage 3 flowers.

(d) RBE expression in a stage 4 and stage 6 flower.

(e) RBE expression in the chalazal region of young ovule primordia (op). Arrows indicate RBE expression in the inner (black) and outer (white) integuments that have

just initiated from the chalazal region in one of these ovule primordia. The base of the ovule primordia are indicated by op.

(f) RBE expression in the inner (black arrow) and outer (white arrow) integuments of ovule primordia.

(g) RBE is expressed in the inner integument (black arrows) and on the adaxial side of the outer integument (white arrows) as the integuments grow around the

nucellus (stage 2-V).

(h) During stage 2-V, RBE expression becomes restricted to the inner integument. Black arrows point to the inner integument of two ovule primordia oriented with

the future micropylar end facing forward.

Scale bars correspond to 50 lm in (a)–(h).

Figure 4. AG expression in rbe-3.

(a) AG is expressed in the center of a Ler stage 3 floral meristem.

(b) AG is expressed in the center of a rbe-3 stage 3 floral meristem.

(c) AG mRNA is detected in the stamen and carpel primordia of a stage 6 flower, but not in the second-whorl petal primordia (arrow).

(d) AG mRNA is present in a rbe-3 second-whorl organ primordia (arrow).

(e) Transverse section of a stage 12 Ler flower showing AG expression in the stamens but not the petal.

(f) Transverse section of a stage 12 rbe-3 flower in which AG is expressed in the adaxial epidermis of the second-whorl organ (arrow).

(g) Transverse section showing AG mRNA in the epidermal layers of two second-whorl organ primordia (arrows).

(h) In mature Ler ovules, AGmRNA is restricted to the endothelium (black arrow). The white arrow points to the endothelium of a second ovule that was sectioned at

an oblique angle.

(i) AG mRNA is restricted to the endothelium in rbe-3 mature ovules (black arrow).

Scale bars correspond to 50 lm in (a)–(i).

374 Beth A. Krizek et al.

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

double mutant. The ag-1 rbe-3 double mutant has the same

phenotype as ag-1 single mutants with completely normal

petals developing in the second whorl (Figure 5a). In addi-

tion, sepal number was normal in these flowers and no

cases of sepal fusion were observed. The epistasis of ag-1 to

rbe-3 indicates thatAG function is required for the rbe-3 first-

and second-whorl defects. Thus, RBE is not required for

petal development per se but rather to prevent AG misex-

pression in the second whorl.

rbe-3 enhances the petal to stamen transformations of

ap2-1, lug-1 and clf-2 mutants

To further investigate the role of RBE in regulation of AG, we

constructed double mutants with genes known to play roles

in AG repression. Because strong ap2 mutants do not pro-

duce second-whorl organs, we investigated the effect of rbe-

3 in the weak ap2-1 background. ap2-1mutants have leaf-like

organs in the first whorl and staminoid petals in the second

whorl (Figure 5b; Bowman et al., 1989). The ap2-1 rbe-3

double mutant showed an additive phenotype in the first

and fourth whorls. Second-whorl organs of the double mu-

tant were more completely converted to stamens or were

missing entirely (Figures 5b and 6a). Because it was some-

times difficult to distinguish second- and third-whorl organs,

we counted the total number of stamens in each flower. The

average number of stamens in ap2-1 rbe-3 flowers was 6.8

compared with 5.8 per ap2-1 flower. Examination of young

ap2-1 rbe-3 flowers by SEM indicated that organ number

was not increased in the third whorl. Thus, the increased

total stamen number in ap2-1 rbe-3 flowers was due to the

presence of stamens in the second whorl. We also observed

fusion between stamens (either between second- and third-

whorl stamens or between third-whorl stamens) in

approximately 24% of ap2-1 rbe-3 flowers (Figure 6b) com-

pared with only 3% in rbe-3 flowers.

We investigated the effect of combining rbe-3 with

mutations in LUG, another repressor of AG. lug-1 flowers

have first-whorl sepals that are sometimes petaloid or

staminoid, a reduced number of second-whorl petals and

carpels that are unfused at their tips (Figure 5c; Liu and

Meyerowitz, 1995). The first, third and fourth whorls of lug-1

rbe-3 double mutants exhibit an additive phenotype. The

number of second-whorl organs was reduced in lug-1 rbe-3

double mutants (from 2.66 per flower in lug-1 to 0.36 in lug-1

rbe-3) and these remaining organs were primarily staminoid

(Figures 5c and 6c). Thus, rbe-3 enhanced the second-whorl

phenotype of lug-1 mutants. The double mutant rarely

produced any seeds, suggesting a more severe defect in

female fertility in the double mutant compared with either

single mutant. However, no enhancement of the outer

integument growth defect was observed in lug-1 rbe-3

flowers (Figure 6d).

We also found genetic interactions between rbe-3 and clf-

2 (Goodrich et al., 1997). Under our growth conditions, clf-2

mutants exhibited curling of both rosette and cauline leaves

and reduction in petal size in the second whorl (Figure 5d).

clf-2 rbe-3 double mutants exhibited leaf curling similar to

Figure 5. rbe-3 double mutants.

(a) ag-1 and ag-1 rbe-3 flowers.

(b) ap2-1 and ap2-1 rbe-3 flowers.

(c) lug-1 and lug-1 rbe-3 flowers.

(d) clf-2 and clf-2 rbe-3 flowers.

(e) ufo-11 and ufo-11 rbe-3 flowers.

(f) ufo-2 and ufo-2 rbe-3 flowers.

(g) ap2-2 and ap2-2 rbe-3 flowers.

(h) ant-4 and ant-4 rbe-3 flowers.

RBE regulates floral boundaries 375

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

that in clf-2. Both clf-2 and clf-2 rbe-3 produced an average of

4.0 second-whorl organs per flower. In clf-2 mutants these

were almost exclusively small petals (3.97 per flower) while

the average number of small petals in clf-2 rbe-3 was 1.37.

Second-whorl petals were most often replaced by spoon-

shaped petals (0.29 per flower), staminoid petals (0.91 per

flower), petaloid stamens (0.78 per flower) or stamens (0.48

per flower; Figure 5d). Thus, rbe-3 enhanced the transfor-

mation of clf-2 second-whorl organs to stamens and

stamen-like organs.

We examined the expression ofAG in ap2-1 rbe-3 and clf-2

rbe-3 plants to determine whether the enhancement of the

second-whorl phenotypes in these double mutants resulted

from AG misexpression. High levels of AG mRNA were

detected not only in the third and fourth whorls of these

flowers but also ectopically in the second whorl, confirming

our hypothesis (Figure 7a,b). In contrast, the class B gene

AP3 was correctly expressed in second- and third-whorl

organs in ap2-1 rbe-3 and clf-2 rbe-3 double mutant flowers

(Figure 7c,d). This normal pattern of AP3 expression paral-

lels that observed previously in rbe-1 singlemutants (Takeda

et al., 2003).

ufo is epistatic to rbe in development of the second whorl

The UFO gene has been shown to promote petal initiation

and development by inhibiting AG activity in the second

whorl (Durfee et al., 2003). To determine whether RBEmight

function in a common pathway with UFO, we crossed rbe-3

to the weak ufo-11 and strong ufo-2 alleles. ufo-11 is a weak

allele specifically affecting petal development (Durfee et al.,

2003). Petals are usually missing in ufo-11 flowers or are

sometimes replaced by filaments or petal/stamen mosaic

organs. ufo-11 flowers have fewer second-whorl organs

compared with rbe-3 mutants and also sometimes produce

mosaic petaloid stamens in the third whorl. ufo-11 rbe-3

double-mutant flowers have a phenotype that is similar to

ufo-11 flowers (Figure 5e). The total number of second-

whorl organs is approximately the same (0.69 second-whorl

organs in ufo-11 flowers compared with 0.58 organs in

Figure 6. Scanning electron micrographs of rbe-3 double mutants.

(a) An ap2-1 rbe-3 flower with eight stamens present in the second and third whorls.

(b) Fusion of two stamen primordia in an ap2-1 rbe-3 flower (arrow).

(c) A lug-1 rbe-3 flower with a stamen-like organ in the second whorl (white arrow). The black arrow indicates a third-whorl stamen.

(d) lug-1 rbe-3 mature ovules.

(e) A first-whorl organ of an ap2-2 flower.

(f) A first-whorl organ of an ap2-2 rbe-3 flower.

(g) Fusion of three first-whorl organs of an ap2-2 rbe-3 flower.

(h) Fusion of two first-whorl organs of an ap2-2 rbe-3 flower.

(i) Fusion of two first-whorl sepals of an ant-4 rbe-3 flower.

(j) ant-4 inflorescence meristem.

(k) ant-4 rbe-3 inflorescence meristem. The arrow points to a wide sepal primordium in a flower with an altered pattern of outer-whorl organ initiation.

(l) ant-4 rbe-3 inflorescence meristem. The arrow points to an extra sepal primordium.

Scale bars correspond to 500 lm in (c) and (e), 200 lm in (a), (f)–(i), 100 lm in (b) and (d) and 50 lm in (j)–(l).

376 Beth A. Krizek et al.

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

ufo-11 rbe-3). The numbers of petals (0.048 in ufo-11 versus

0.055 in ufo-11 rbe-3) and mosaic organs (0.19 in ufo-11

versus 0.22 in ufo-11 rbe-3) is the same in both the single and

double mutant. However, we did observe a significant in-

crease in the number of stamens (0.014 in ufo-11 versus

0.132 in ufo-11 rbe-3) and a slight decrease in the number of

filaments (0.43 in ufo-11 versus 0.18 in ufo-11 rbe-3) in the

double mutant. Thus, rbe-3 seems to slightly enhance the

phenotype of ufo-11.

ufo-2 mutants show homeotic transformations of floral

organ identity, most often in the second and third whorls

(Levin and Meyerowitz, 1995; Wilkinson and Haughn, 1995).

Second-whorl petals are often replaced with sepals and

third-whorl stamens are often replaced by carpels (Fig-

ure 5f). In addition, filaments and mosaic organs are com-

monly found in these whorls. The ufo-2 rbe-3 double mutant

has the same phenotype as the ufo-2 single mutant

(Figure 5f). There is no increase in the number of filaments

and/or staminoid organs in the double mutant as compared

with ufo-2. These genetic results suggest that UFO and RBE

work in a single pathway to promote petal initiation and

development in the second whorl. The similarity of the RBE

and UFO expression patterns in stage 3 flowers is consistent

with this model (Lee et al., 1997).

To determine the order of gene actions (i.e. whether UFO

acts upstream of RBE or vice versa), we examined RBE

expression in ufo mutants and UFO expression in rbe

mutants. RBE expression is dramatically reduced in ufo-11

mutants (Figure 8a–d). In most ufo-11 flowers, no RBE

mRNA could be detected. UFO expression is normal in

rbe-3 mutants as compared with wild-type flowers (Fig-

ure 8e–h). Both the level and pattern of UFO expression are

the same in rbe-3 and Ler inflorescences. Our data are

consistent with UFO acting upstream of RBE and being

required for normal levels of RBE expression.

Although the second-whorl petal loss phenotype is more

severe in weak ufo mutants than in rbe mutants, AG

mRNA was not detected in the second whorl of ufo flowers

(Durfee et al., 2003). It was therefore suggested that AG

does not act autonomously in second whorl cells of weak

ufo alleles (Durfee et al., 2003). These data argue against

RBE and UFO acting in a single common pathway.

However, it is also possible that AG misexpression in

weak ufo mutants was not detected due to technical

challenges. Because petal primordia arise from just two

cells in a flower primordium (Bossinger and Smyth, 1996),

very early misexpression of AG would be difficult to

observe by in situ hybridization. Furthermore, the almost

complete loss of second-whorl organs in most ufo flowers

would probably prevent detection of later AG misexpres-

sion. Because a few second-whorl organs are produced in

the earliest-arising flowers of weak ufo alleles, we exam-

ined AG expression in ufo-14 flowers by in situ hybridiza-

tion. We observed AG expression in some second-whorl

organs of ufo-14 flowers (Figure 8i–k). Our results are

consistent with the defects in weak ufo alleles being due to

AG misexpression in the second whorl. The less severe

petal loss phenotype in rbe as compared with the weak ufo

alleles might result from UFO regulating other AG repres-

sors in addition to RBE.

Figure 7. AG and AP3 expression in ap2-1 rbe-3

and clf-2 rbe-3 double mutants.

(a) AG is expressed in the second, third and

fourth whorls of this stage 7 ap2-1 rbe-3 flower.

An arrow points to a second-whorl organ.

(b) AGmRNA is detected in the second, third and

fourth whorls of this stage 7 clf-2 rbe-3 flower. An

arrow points to a second-whorl organ.

(c) AP3mRNA is present in the second- and third-

whorl organs of this stage 7 ap2-1 rbe-3 flower.

(d) AP3 is expressed in the second- and third-

whorl organs of this stage 7 clf-2 rbe-3 flower.

Scale bars correspond to 50 lm in (a)–(d).

RBE regulates floral boundaries 377

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

Figure 8. RBE, UFO, and AG expression in wild

type, ufo, and rbe mutants.

(a–d) RBE expression in Columbia (Col) and ufo-

11.

(a) RBE expression in a stage 3 Col flower.

(b) No RBE mRNA was detected in this stage 3

ufo-11 flower.

(c) RBE expression in a stage 5 Col flower.

(d) No RBE mRNA was detected in this stage 5

ufo-11 flower.

(e–h) UFO expression in Ler and rbe-3 inflores-

cences.

(e) In Ler plants, UFO mRNA is present in the

inflorescence meristem (IM) and in a cup-shaped

domain in stage 3 flowers.

(f) In rbe-3 plants, UFO is expressed in the

inflorescence meristem (IM) and in a cup-shaped

domain in stage 3 flowers.

(g)UFO is expressed between the sepals (Se) and

petals in this stage 7 Ler flower. The arrow points

to a second-whorl petal primordium.

(h) UFO is expressed between the sepals and

second-whorl organs in this stage 7 rbe-3 flower.

The arrow points to a second-whorl organ prim-

ordium.

(i–k) AG expression in ufo-14.

(i) AGmRNA is detected in a second-whorl organ

of this ufo-14 flower (indicated by an arrow).

(j) Close-up of the second-whorl organ shown in

(i).

(k) AG mRNA is detected in a second-whorl

staminoid petal of this ufo-14 flower (arrow).

Scale bars correspond to 50 lm in (a)–(k).

378 Beth A. Krizek et al.

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

ap2-2 rbe-3 and ant-4 rbe-3 double mutants show

enhanced first-whorl organ fusion

Strong ap2-2 alleles have carpels or staminoid carpels in

medial first-whorl positions and leaf-like organs in the lateral

positions (Figure 5g; Bowman et al., 1991b). The first-whorl

staminoid carpels are mosaic organs consisting of a central

region of carpel tissue fused on one or both sides with sta-

men tissue (Figure 6e). Second-whorl organs are missing in

ap2-2 flowers and there are a reduced number of third-whorl

stamens. In ap2-2 rbe-3 double mutants, first-whorl carpels

and staminoid carpels were often wider than in ap2-2 (Fig-

ure 6f). These organs had the appearance of several fused

organs but were only connected to the base of the flower in

the central part of the organ and were in a position normally

occupied by a single organ. In addition, first-whorl organs

were often fused along much of their length (Figures 5g and

6g). All of the first-whorl organs were sometimes fused such

that the fourth whorl carpel poked through a ring of tissue

(Figure 6h). Cells present along the margin of fusion

resembled the epidermal cells normally present on the ab-

axial replum of wild-type carpels. Thus, the function of RBE

in the separation of floral organs does not depend on the

identify of the organs in the first whorl. The number of first-

whorl organs in the double mutant was slightly increased

compared with ap2-2 single mutants (3.96 in ap2-2 rbe-3

compared with 3.56 in ap2-2). No second-whorl organs were

present in the doublemutant and the third and fourth whorls

had an additive phenotype.

ant-4 flowers have the normal pattern of organ identity

but show reductions in both organ number and size

(Figure 5h; Elliott et al., 1996; Klucher et al., 1996). ant-4

rbe-3 double mutants had an increased number of sepals

compared with either singlemutant (4.42 sepals in ant-4 rbe-

3 compared with 3.98 in ant-4). In early arising flowers as

many as eight sepals were present. In addition, fusion

between sepals was observed in ant-4 rbe-3 mutants (Fig-

ures 5h and 6i). Sepals in the double mutant were often

fused along their entire length rather than just at their base

as usually seen in rbe-3. The initiation pattern of sepal

primordia was often disrupted in ant-4 rbe-3 double

mutants. One or more of the primordia were sometimes

initiated in positions shifted from the typical medial and

lateral positions (Figure 6j,k). This resulted in the four

primordia not being equally spaced from each other. In

some cases, the positions of four sepal primordia were fairly

normal but an additional sepal primordium arose in a region

between a medial sepal and a lateral sepal (Figure 6l).

ant-4 rbe-3 flowers also show a reduction in the overall

number of second-whorl organs (3.8 in rbe-3 compared with

2.5 in ant-4 rbe-3). In addition, fewer filaments (1.2 in rbe-3

compared with 0.7 in ant-4 rbe-3) and staminoid organs (0.5

Figure 9. cuc2-1 rbe-3 double mutant.

(a) Side view of a cuc2-1 flower. Sepals are fused

at their base (arrows).

(b, c) Side views of two cuc2-1 rbe-3 flowers.

Sepals are fused along much of their length

(arrows).

(d) Stage 5 cuc2-1 flower.

(e) Stage 6 cuc2-1 flower. The arrow points to the

uppermost region of fusion between two sepal

primordia.

(f) Stage 5 cuc2-1 rbe-3 flower.

(g) Stage 6 cuc2-1 rbe-3 flower. The arrow points

to the uppermost region of fusion between two

sepal primordia.

Scale bars correspond to 20 lm in (d) and 50 lmin (e)–(g).

RBE regulates floral boundaries 379

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

in rbe-3 compared with 0.04 in ant-4 rbe-3) were present in

the double mutant compared with rbe-3 single mutants.

Reduced stamen number in the third whorl of ant-4 mutants

was partially rescued by rbe-3. ant-4 mutants have 4.3

stamens per flower whereas ant-4 rbe-3 flowers produce 5.6

stamens per flower.

cuc2-1 rbe-3 double mutants show increased frequency and

extent of sepal fusion

To further investigate the roleofRBE inorganseparation, rbe-

3 was crossed to cuc2-1. In the cuc2-1 single mutant, sepals

are sometimes fused at their base (Aida et al., 1997;

Figure 9a). In rbe-3 cuc2-1 flowers, sepal fusion occurred

moreoftenand toagreater extent than ineither singlemutant

(Figure 9b,c; Table 1). The width of cuc2-1 and cuc2-1 rbe-3

sepals is the same at maturity (Table 1), suggesting that the

increasedamountof fusion in thisdoublemutant isnotdue to

increased organwidth. Examination of sepal development in

the cuc2-1 rbe-3 double mutant by SEM showed that four

distinct sepal primordia are initiated in a normal pattern

during stage 3 of flower development aswas seenpreviously

for cuc2-1 and rbe-3 single mutants. Later growth of sepal

primordia in the cuc2-1 rbe-3double is uneven, similar to that

seen in rbe-3 single mutants. An increased extent of sepal

fusion in the cuc2-1 rbe-3 double mutant as compared with

cuc2-1was first observed during stage 6 (Figure 9d–g).

Discussion

RBE is a new repressor of AG expression

Our studies have identified RBE as a new repressor of AG

expression in Arabidopsis flowers. The defects observed in

the second whorl of rbe mutants (reduced organ number,

replacement of petals by filaments and staminoid organs)

result from ectopic expression of AG in second-whorl cells.

In the absence of AG activity, development of both first- and

second-whorl organs is normal in rbemutants. RBE encodes

a potential transcriptional repressor. It contains a single

Cys2His2 zinc-finger DNA-binding domain and an ethylene-

responsive element binding factor (ERF)–associated

amphiphilic repression (EAR)-like domain (Takeda et al.,

2003). The related protein SUPERMAN (SUP), which con-

tains a similarly arranged single zinc-finger domain and

EAR-like motif, has been shown to possess both DNA-

binding and transcriptional repression activities (Dathan

et al., 2002; Hiratsu et al., 2002). SUP and RBE are similar in

that mutations in either gene disrupt the ability to maintain

the boundaries of floral homeotic gene expression.

All but one of the previously identified AG repressors

prevent AG transcription in both the first and second whorls

of the flower.We have never observed carpelloid features on

first-whorl sepals or misexpression of AG in first-whorl

organs of rbe mutants, suggesting that RBE acts only within

the second whorl to repressAG expression. This is similar to

the proposed function of ANT in AG repression (Krizek et al.,

2000). The spatially restricted expression pattern of RBE also

contrasts with that of other known AG repressors that are

transcribed in all four whorls of the flower (Conner and Liu,

2000; Goodrich et al., 1997; Jofuku et al., 1994). The recent

demonstration thatAP2 is regulated at the translational level

by miRNA172 suggests one possible mechanism for restric-

tion of AG repressor activity to the outer whorls of the flower

(Aukerman and Sakai, 2003; Chen, 2004). Another possibility

is that globally expressed AG repressors require whorl-

specific factors like RBE for their activity.

Plant Cys2His2 zinc-finger proteins containing the con-

served QALGGH sequence have been shown to bind 5¢-AGT-

3¢ sequences. In SUP, the single zinc-finger domain and

adjacent basic residues on either side of the zinc finger are

sufficient to bind such sequences (Dathan et al., 2002). Basic

residues are also present on either side of the RBE zinc

finger; those at the carboxy-terminal end of the zinc finger

are present at conserved positions with those in SUP. Cis-

acting regulatory sequences required for proper spatial

expression of AG are located in the AG 3 kb second intron

(Busch et al., 1999; Deyholos and Sieburth, 2000; Sieburth

and Meyerowitz, 1997). We examined this intron for the

presence of AGT elements and found a total of 102 such

sequences on either strand. The expected number of AGT

sequences on either strand of a 3 kb piece of DNA is 94.

Although the total number of AGT sequences is not signi-

ficantly greater than the expected number, six of these

sequences are present within regions conserved among 29

Brassicaceae species (Hong et al., 2003). Further work will be

necessary to determine whether RBE binds directly to AG

regulatory sequences.

Pathways regulating petal development

Mutations in UFO, RBE or PTL cause somewhat similar de-

fects in the outer two whorls of the flower. Sepal fusion can

occur in the first whorl of ufo-11 (B. Krizek, unpublished

data), similar to that observed in rbe-3 and ptl-1 (Griffith

et al., 1999). In the second whorl, mutations in any of these

three genes results in loss of petals and/or their replacement

with filaments or staminoid organs. Our results suggest that

RBE and UFO are components of a common pathway that

regulates petal initiation and development. RBE transcripts

are dramatically reduced in ufomutants, indicating thatUFO

is required for RBE expression. Furthermore, AG misex-

pression in the second whorl occurs in both rbe and weak

ufo alleles, and the second-whorl defects in these mutants

can be eliminated by the loss of AG activity.

UFO has been shown to function as part of a SCFUFO

complex in flowers. Such complexes act as E3 ubiquitin

ligating enzymes in the ubiquitin–proteasome protein

380 Beth A. Krizek et al.

ª 2006 The AuthorsJournal compilation ª 2006 Blackwell Publishing Ltd, The Plant Journal, (2006), 45, 369–383

degradation pathway. Interestingly, mutations in other

components of the SCFUFO complex result in carpelloid

sepals, sepal fusion and dramatic reductions in petal num-

ber (Ni et al., 2004). These phenotypes are present in axr6-2

and ask1/ask1 ask2/ASK2 plants and require AG activity.

Thus SCF complexes have been proposed to repress AG

function in the outer whorls and to play a role in organ

separation by regulating cell division in each whorl (Ni et al.,

2004). Our results are consistent with the SCFUFO complex

mediating proteolysis of a repressor of RBE expression in

the second whorl.

Whether PTL is a component of theUFO/RBE pathway or a

separate pathway remains unclear. RBE has been proposed

to function downstream of PTL in the development of

second-whorl organs, as RBE is not expressed in ptlmutants

(Takeda et al., 2003). However, AG activity is not responsible

for the ptl second-whorl defects as they are still present in ptl

ag double mutants (Griffith et al., 1999). This argues against

the idea of RBE acting directly downstream of PTL. An

alternative possibility is that PTL may act as a growth

suppressor in regions between adjacent sepals, and its effect

on second-whorl development (and RBE expression)may be

an indirect consequence of excessive growth within the

inter-sepal domain (Brewer et al., 2004). Further experi-

ments will be required to determine whether PTL and RBE

act together in organ formation in the first and/or second

whorls. PTL and RBE are expressed in adjacent groups of

cells in the first and second whorls. The similarity of the ptl

and rbe phenotypes suggest that signaling between these

two populations of cells is critical for regulating organ

growth during early stages of flower development.

RBE may be a component of an inter-whorl signaling

pathway that regulates growth in the outer two floral whorls

RBE is only expressed in second-whorl cells (Takeda et al.,

2003), yet mutations in this gene alter growth in both the first

and second whorls. Decreased growth in the second whorl

of rbe mutants appears to be accompanied by increased

growth in an adjacent region of the first whorl. We propose

that signaling pathways act between adjacent groups of cells

in the first and second whorls to regulate cellular prolifer-

ation. In our model (Figure 10), UFO and RBE act in one

pathway by promoting proliferation of second-whorl cells

through repression of AG, which acts as a suppressor of

growth when misexpressed in the second whorl (Bowman

et al., 1991b, 1993). Proliferating second-whorl cells at the

sites of petal initiation generate a signal (S) that moves to

adjacent first-whorl cells, activating a first-whorl inhibitor (I)

of growth in these regions. Such a pathway results in petal

initiation and growth as well as the establishment of

boundaries between adjacent sepal primordia. In thismodel,

the amount of second-whorl cell proliferation and thus the

amount of S generated is controlled by the activities of UFO

and RBE. ROXY1, a glutaredoxin protein (Xing et al., 2005),

may also play a role here as a potential post-translational

regulator of RBE. In rbe flowers, expression of AG in the

second whorl inhibits cell proliferation in the second whorl.

This results in reduction or elimination of the growth inhi-

bition signal to the first whorl, leading to increased growth in

the inter-sepal zone and consequently sepal–sepal fusion

and the occasional formation of extra sepals.

Experimental procedures

Plant growth conditions, mutant isolation and strain

construction

Arabidopsis plants were grown in a 4:1:1 mix of Fafard 4P:per-lite:vermiculite at 22�C in continuous light. The rbe-3 allele was

Figure 10. Model for RBE function in development of the first and second

whorls.

Solid arrows and bars describe interactions supported by genetic and/or

molecular evidence. Dotted arrows indicate proposed interactions. The green

ellipses represent sepal primordia and the yellow circle represents a petal

primordium. RBE promotes the development of second-whorl organs by

acting as a repressor of AG in second-whorl cells. Negative regulation of AG

by RBE results in increased proliferation of second-whorl cells since AG is an

inhibitor of the development of second-whorl organs. RBE acts downstream

of UFO in this pathway. RBE may be regulated post-translationally by the

glutaredoxin protein ROXY1 (Xing et al., 2005). RBE inhibits growth of the first

whorl in regions adjacent to RBE-expressing second-whorl cells. Division of

second-whorl cells could generate a signal that moves to the first whorl and

activates an inhibitor (I) of first-whorl growth in regions adjacent to initiating

petal primordia. In rbe mutants, reduced second-whorl proliferation due to

ectopic AG activity would lead to reduced amounts of the first-whorl growth

inhibition signal.

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isolated from a mutagenized population of 35S::PI seeds in theNossen (No-O) ecotype. The rbe-3 allele was backcrossed four timesto Ler prior to phenotypic analyses. All doublemutants were createdby manual cross-pollination using homozygous mutant strains,except for ag-1. We believe the weak ufo allele used in our geneticstudies is ufo-11. Polymerase chain reaction (PCR) genotypingand sequencing of PCR products from this allele indicated thatthe ufo-12, ufo-13 and ufo-14molecular lesions are not present. Thegenotype of ufo-11 rbe-3 double mutants was confirmed usingcleaved amplified polymorphic sequences (CAPS) markers for therbe-3 mutation and crossing of the plants to ufo-11.

Scanning electron microscopy

Samples for SEM were fixed, dried, dissected and coated as des-cribed previously (Krizek, 1999). Images were collected on a XL30.To measure the widths of stage 3 floral meristems, images werecaptured at a magnification of 800·, printed and measured with aruler. The width of the dome of the floral meristem was measuredfrom the middle of one medial sepal to the middle of the oppositemedial sepal. Ten stage 3 floral meristems were measured for Lerand 13 for rbe-3.

Sepal width measurements

All sepals were removed from mature flowers corresponding topositions 1–12 on the inflorescences of four individual plants ofeach genotype. The sepals were laid on their adaxial side and theirwidth measured with an ocular micrometer.

In situ hybridization

Inflorescences were fixed, embedded, sectioned, hybridized andwashed as described previously (Krizek, 1999). Digoxigenin-labe-led RNA probes were synthesized by in vitro transcription usingT7 RNA polymerase. The AG antisense probe was made bydigestion of pCIT565 (Yanofsky et al., 1990). For the RBE antisenseprobe, a fragment of RBE corresponding to nucleotides 273–580was cloned into pCR2.1 and linearized with BamHI. The UFOantisense probe was made by digestion of pDW221.1 with ClaI(Lee et al., 1997).

Acknowledgements

We thank the Salk Institute Genomic Analysis laboratory for provi-ding the Arabidopsis T-DNA insertion mutant, the ArabidopsisBiological Resource Center for seeds of the T-DNA insertion mutant(SALK_037010) and cuc2-1, DetlefWeigel for theUFO in situ plasmidpDW221.1 and Patricia Zambryski for the weak ufo alleles. This workwas supported by a University of South Carolina Research andProductive Scholarship award to BAK and by a United StatesDepartment of Agriculture CRIS grant to JCF.

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