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Yusuke Oishi, James Southern Fujitsu Laboratories of Europe Computational Science at the Petascale and Beyond: Challenges and Opportunities Australian National University, 13 February 2012 Tsunami Propagation Modelling With Fluidity

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Page 1: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

Yusuke Oishi, James Southern

Fujitsu Laboratories of Europe

Computational Science at the Petascale and Beyond:

Challenges and Opportunities

Australian National University, 13 February 2012

Tsunami Propagation Modelling

With Fluidity

Page 2: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Tsunami Propagation

Tsunami propagation simulations are generally

based on the shallow water equations or the

dispersive wave equations using finite

difference methods on structured meshes.

E.g., reported simulations of the Tohoku tsunami:

1 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Yamazaki et al. (2011, GRL)

Non-linear dispersive wave dx = ∼600-m - ∼3 km

Maeda et

al. (2011)

Linear shallow water

Fujii et

al. (2011)

Linear shallow water

Saito et al.

(2011, GRL)

Linear dispersive wave

Page 3: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

3D Tsunami Simulations

Saito and Furumura

(2009, JGR):

Simulations based on

the 3D Navier Stokes

equations.

Accurately reproduce

dispersive waves.

But, on a uniform

structured mesh.

2 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

dx = 1km, dz = 200m, (Nx, Ny, Nz) = (1600, 2048, 110)

Saito and Furumura (2009, JGR)

Goal: Develop a highly accurate

tsunami model that runs on the most

powerful supercomputers using state-

of-the-art numerical methods.

Approach: Solve the 3D Navier-Stokes equations using finite

element methods on an unstructured mesh.

Page 4: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Unstructured Meshes

3 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Unstructured mesh

(500 m ≤ dx ≤ 5 km)

Structured mesh

(dx = 500m)

http://maps.google.com

Page 5: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Layered Vertical Axis

4 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

z-coordinates σ-coordinates

Constant

number of

vertical layers

Page 6: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

3D Tsunami Model

Run using the Fluidity-ICOM CFD code.

Galerkin finite element method.

P1DG-P2 elements (discontinuous linear u and

continuous quadratic p).

Unstructured tetrahedral mesh.

Linear solvers: GMRES + SOR for u, CG + AMG for p.

Crank-Nicolson time integration.

5 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

0

02

0

u

guuuu

νρ

p

t

0

p

uy

ux

ut

zyx

0 ,0

n

tn

eueu

3-D Navier-Stokes

equations

Free surface

boundary

Bottom and

land boundaries

Page 7: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Ocean of Constant Depth

Compare to analytical solution for incompressible,

irrotational flow with constant depth.

6 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

3D NS model (3 vertical layers) Dispersive wave model

longer dispersive tail

delay

Shallow water model

at x = 100 km

no dispersive tail

early

depth: h = 4000 m

initial condition : kh = 3.14

x 0 250km

km) 8( λ

Page 8: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Example: Tohoku 2011

7 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Page 9: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Comparing Simulations

8 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

3D NS model (3 layers) Dispersive wave model Shallow water model

t = 30 min

Close-up

8

Page 10: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Comparing to Real Data

9 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

21418

Fukushima

Iwate S

PG1

Initial wave height is according to Fujii et al. (2011). Observation data of ocean bottom pressure gauge are provided by

JAMSTEC (PG1) and NOAA/PMEL (21418), those of GPS buoy by MLIT and PARI. Bathymetry data J-EGG500 from JODC

and GEBCO are used.

Red: 3D NS

Gray: Observation

Page 11: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Computational Cost

10 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Time required to simulate 1 minute of tsunami activity

Page 12: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Conclusions

A 3D unstructured mesh finite element model

tsunami model successfully simulated the Tohoku

tsunami using the Fluidity CFD package.

Dispersive waves were generated at the near-trench

region because of the short wavelength components of

the wave source and propagated to the east and west.

The 3D model is able to capture these short wavelength

(dispersive) waves – improving the accuracy of the wave

pattern near source.

Running full 3D simulations of large regions of

ocean requires very large compute resources.

11 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Page 13: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Future Extensions

Multi-scale simulation consisting of:

Propagation.

Inundation processes, included by coupling a wetting/drying algorithm to 3D Navier-Stokes equations.

Larger computations.

Increase accuracy.

Model larger regions of the ocean/coastline.

12 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Funke et al. (2011)

The 2011 Tohoku Earthquake Tsunami Joint

Survey Group (http://www.coastal.jp/ttjt)

Page 14: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University

Acknowledgements

Thanks to our collaborators at:

Applied Modelling and Computation Group, Imperial

College London.

Earthquake Research Institute, University of Tokyo.

13 Copyright 2012 FUJITSU LABORATORIES OF EUROPE

Page 15: Tsunami Propagation Modelling With Fluiditycs.anu.edu.au/~./.../events/petaCompWkshop12/TsunamiModellingFluidity.pdf · Yusuke Oishi, James Southern Fujitsu Laboratories of Europe

13 February 2012, Australian National University 14 Copyright 2010 FUJITSU LIMITED