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References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 137
Abarzua S, Jakubowski S, Eckert S & Fuchs P (1995) Biotechnological investigation for the
prevention of marine biofouling II. Blue-green algae as potential producers of biogenic
agents for the growth inhibition of microfouling organisms. Bot Mar 42: 459–465.
Aguirre-Lipperheide M & Evans LV (1993) A sterilization protocol for the Dictyotales
(Phaeophyceae) 1. J Phycol 29: 243–251.
Ahlgren NA, Harwood CS, Schaefer AL, Giraud E & Greenberg EP (2011) Aryl- homoserine
lactone quorum sensing in stem-nodulating photosynthetic bradyrhizobia. Proc Nati Acad Sci
USA. 108: 7183–7188.
Almeida MG, Humanes M, Melo R, Silva JA, da Silva J & Wever R (2000) Purification and
characterisation of vanadium haloperoxidases from the brown alga Pelvetia canaliculata.
Phytochemistry 54: 5–11.
Alongi DM (1998) Coastal ecosystem processes. CC Press: London.
Andrews JH & Harris RF (2000) The ecology and biogeography of microorganisms on plant
surfaces. Annu Rev Phytopathol 38: 145–180.
Andersen RA (2006) Algal culturing techniques. Elsevier, Amsterdam.
Ariosa Y, Quesada A, Aburto J, Carrasco D, Carreres R, Leganes F, et al., (2004) Epiphytic
cyanobacteria on Chara vulgaris are the main contributors to N2 fixation in rice fields. Appl
Environ Microbiol 70: 5391–5397.
Armstrong E, Yan L, Boyd KG, Wright PC & Burgess JG (2001) The symbiotic role of marine
microbes on living surfaces. Hydrobiologia 461: 37–40.
Ashen JB & Goff LJ (2000) Molecular and ecological evidence for species specificity and
coevolution in a group of marine algal-bacterial symbioses. Appl Environ Microbiol 66:
3024–3030.
Bainton NJ, Stead P, Chhabra SR, Bycroft BW, Salmond GPC, Stewart GSAB, et al., (1992)
N- (3-Oxohexanoyl)-L-homoserine lactone regulates carbapenem antibiotic production in
Erwinia carotovora. Biochem J 288: 997– 1004.
Baker JT (1984) Seaweeds in pharmaceutical studies and applications. Hydrobiologia 116–117:
29–40.
Ballantine DL, Gerwick WH, Velez SM, Alexander E & Guevara P (1987) Antibiotic activity of
lipid-soluble extracts from Caribbean marine algae. Hydrobiologia 151/152: 463–469.
Bartel B (1997) Auxin biosynthesis. Annu Rev Plant Phys 48: 51–66.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 138
Bassler BL (1999) How bacteria talk to each other: regulation of gene expression by quorum
sensing. Curr Opin Microbiol 2: 582-587.
Baweja P, Sahoo D, Garcia-Jimenez P & Robaina RR (2009) Seaweed tissue culture as applied
to biotechnology: problems, achievements and prospects. Phycol Res 57: 45–58.
Berland BR, Bonin DJ & Maestrini SY (1972) Are some bacteria toxic for marine algae? Mar
Biol 12: 189–193.
Bhakuni DS & Silva M (1974) Biodynamic substances from marine flora. Bot Mar 17: 40–51.
Bird CJ & McLachan J (1986) Effect of salinity on the distribution of species of Gracilaria
Grev. (Rhodophyta, Gigartinales): an experimental assessment. Bot Mar 29: 231–236.
Bolinches J, Lemos ML & Barja JL (1988) Population dynamics of heterotrophic bacterial
communities associated with Fucus vesiculosus and Ulva rigida in an estuary. Microb Ecol
15: 345–357.
Bonneau ER (1977) Polymorphic behaviour of Ulva lactuca (Chlorophyta) in axenic culture. J
Phycol 13: 133-140.
Bradford MM (1976) A rapid and sensitive method for the quantification of microgram
quantities of protein utilizing the principle protein-dye binding. Anal Biochem 72: 248–254.
Bradley PM (1991) Plant hormones do have a role in controlling growth and development of
algae. J Phycol 27: 317-321.
Bremer PJ & Geesey GG (1991) An evaluation of biofilms development utilizing non-
destructive attenuated total reflectance Fourier transform infrared spectroscopy. Biofouling 3:
89–100.
Bric JM, Bostock RM & Silverstone S (1991) Rapid in situ assay for indole acetic acid
production by bacteria immobilized on a nitrocellulose membrane. Appl Environ Microb 57:
535–538.
Britschgi TB & Giovannoni SJ (1991) Phylogenetic analysis of a natural marine
bacterioplankton population by rRNA gene cloning and sequencing. Appl Environ Microbiol
57: 1707–1713.
Brock TD & Clyne J (1984) Significance of algal excretory products for growth of epilimnetic
bacteria. Appl Environ Microbiol 47: 731–734.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 139
Burke C, Steinberg P, Rusch D, Kjelleberg S & Thomas T (2011b) Bacterial community
assembly based on functional genes rather than species. Proc Natl Acad Sci USA 108:
14288–14293.
Burke C, Thomas T, Lewis M, Steinberg P & Kjelleberg S (2011a) Composition, uniqueness
and variability of the epiphytic bacterial community of the green alga Ulva australis. ISME J
5: 590–600.
Burr FA & West JA (1970) Light and electron microscope observations on the vegetative and
reproductive structures of Bryopsis hypnoides. Phycologia 10: 125–134.
Byrne K, Zuccarello GC, West J, Liao M & Kraft GT (2006) Gracilaria species (Gracilariaceae,
Rhodophyta) from southeastern Australia, including a new species, Gracilaria perplexa sp.
nov.: morphology, molecular relationships and agar content. Phycol Res 50: 295–311.
Callow JA, Callow ME, Ista LK, Lopez G & Chaudhury MK (2005) The influence of surface
energy on the wetting behaviour of the spore adhesive of the marine alga Ulva linza (syn.
Enteromorpha linza). J R Soc Interface 2: 319– 325.
Callow ME & Callow JA (1998) Enhance adhesion and chemoattraction of zoospore of the
fouling alga Enteromorpha to some foul-release silicone elastomers. Biofouling 13: 157-172.
Callow ME & Callow JA (2000) Substratum location and zoospore behaviour in the fouling
alga Enteromorpha. Biofouling 15: 49– 56
Callow ME, Callow JA, Ista LK, Coleman SE, Nolasco AC & Lopez GP (2000) Use of self-
assembled monolayers of different wettabilities to study surface selection and primary
adhesion processes of green algal (Enteromorpha) Zoospores. Appl Environ Microbiol 66:
3249–3254.
Callow ME, Callow JA, Pickett-Heaps JD & Wetherbee R (1997) Primary adhesion of
Enteromorpha (Chlorophyta, Uvales) propagules: quantitative settlement studies and video
microscopy. J Phycol 33: 938–947.
Callow ME, Jennings AR, Brennan AB, Seegert CE, Gibson A & Wilson L (2002)
Microtopographic cues for settlement of zoospores of the green fouling alga Enteromorpha.
Biofouling 18: 237–245.
Cao S & Hu Z (2011) Characterization the expressed enzyme efficient hydrolysis of mannan
and heteromannans in Yeast. J Microb Biochem Technol 3: 001-005.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 140
Carlier A, Uroz S, Smadja B, Fray R, Latour X, Dessaux Y, et al., (2003) The Ti plasmid of
Agrobactetium tumefaciens harbors an attM-paralogous gene aiiB, also encoding N-acyl
homoserine lactonase activity. Appl Environ Microbiol 69: 4989–4993.
Carpentier B & Cerf O (1993) Biofilms and their consequences, with particular reference to
hygiene in the food industry. J Appl Microbiol 75: 499–511.
Cataldi TRI, Bianco G & Abate S (2009) Accurate mass analysis of N-acyl-homoserine-lactones
and cognate lactone-opened compounds in bacterial isolates of Pseudomonas aeruginosa
PAO1 by LC-ESI-LTQ-FTICR-MS. J Mass Spectrom 44: 182.
Ceh J, Raina JB, Soo RM, van Keulen M & Bourne DG (2012) Coral-Bacterial Communities
before and after a Coral Mass Spawning Event on Ningaloo Reef. PLoS ONE 7: e36920.
Chandini SK, Ganesan P, Suresh PV & Bhaskar N (2008) Seaweeds as source of nutritionally
beneficial compounds – a review. J Food Sci Technol 45:1–13.
Chao A (1987) Estimating the population-size for capture recapture data with unequal
catchability. Biometrics 43: 783–791.
Chen LCM & McCracken I (1993) An antibiotic protocol for preparing axenic cell culture of
Porphyra linearis. Bot Mar 36: 29-33.
Chen LCM & Taylor ARA (1978) Medullary tissue culture of the red alga Chondrus crispus.
Can J Bot 56: 883-886.
Chen LCM (1986) Cell development of Porphyra miniata (Rhodophyceae) under axenic
culture. Bot Mar 24: 435-439.
Chen LCM (1989) Cell suspension culture from Porphyra linearis (Rhodophyta) a multicelluar
marine red algae. J App Phycol 1: 153-159.
Chen W & Kuo T (1993) A simple and rapid method for the preparation of gram negative
bacterial genomic DNA. Nucleic Acids Res 21: 2260.
Chhabra SR, Stead P, Bainton NJ, Salmond GPC, Stewart GSAB, Williams, P, et al., (1993)
Autoregulation of carbapenem biosynthesis in Erwinia carotovora by analogues of N-(3-
oxohexanoyl)-L-homoserine lactone. J Antibiotic 46: 441–449.
Chisholm JRM, Dauga C, Ageron E, Grimont PAD & Jaubert JM (1996) Roots in mixotrophic
algae. Nature 381: 565.
Cho BC & Azam F (1988) Major role of bacteria in biogeochemical fluxes in the ocean’s
interior. Nature 332: 441-443.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 141
Choi HG, Kim YS, Kim JH, Lee SJ, Park EJ, Ryu J, et al., (2006) Effects of temperature and
salinity on the growth of Gracilaria verrucosa and G. chorda, with the potential for
mariculture in Korea. J Appl Phycol 18: 269–277.
Christie AO, Evans LV & Shaw M. (1970) Studies on the ship fouling alga Enteromorpha: The
effect of certain enzymes on the adhesion of zoospores. Ann Bot 34: 467-82.
Chung KR, Shilts T, Erturk U, Timmer LW & Ueng PP (2003) Indole derivatives produced by
the fungus Colletotrichum acutatum causing lime anthracnose and post bloom fruit drop of
citrus. FEMS Microbiol Lett 226: 23–30.
Collen J & Davison IR (2001) Seasonality and thermal acclimation of reactive oxygen
metabolism in Fucus vesiculosus (Phaeophyceae). J Phycol 37: 474–481.
Costerton JW, Stewart PS & Greenberg EP (1999) Bacterial biofilms: a common cause of
persistent infections. Science 284: 1318–1322.
Cottrell MT & Kirchman DL (2000) Community composition of marine bacterioplankton
determined by 16S rDNA clone libraries and fluorescence in situ hybridization. Appl Environ
Microbiol 66: 5116–5122.
Coveney MF & Wetzel RG (1989) Bacterial metabolism of algal extracellular carbon.
Hydrobiologia 173: 141–149.
Croft MT, Lawrence AD, Raux-Deery E, Warren MJ & Smith AG (2005) Algae acquire vitamin
B12 through a symbiotic relationship with bacteria. Nature 438: 90–93.
Cundell AM, Sleeter TD & Mitchell R (1977) Microbial populations associated with the
surface of the brown alga Ascophyllum nodosum. Microb Ecol 4: 81–91.
Cunliffe M & Kertesz MA (2006) Autecological properties of soil sphingomonads involved in
the degradation of polycyclic aromatic hydrocarbons. Appl Environ Microbiol 72: 1083–
1089.
Davis JB (1968) Paraffinic hydrocarbons in the sulfate-reducing bacterium Desulfovibrio
desulfuricans. Chem Geol 2: 155-160.
Dawes CJ & Koch EW (1991) Branch, micropropagule and tissue culture of the red algae
Eucheuma denticulatum and Kappaphycus alvarezii farmed in the Philippines. J Appl Phycol
3: 247-257.
Dawes CJ & Lohr CA (1978) Cytoplasmic organization and endosymbiotic bacteria in the
growing points of Caulerpa prolifera. Rev Algol 13: 309–314.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 142
Debeer D, Srinivasan R & Stewart PS (1994) Direct measurement of chlorine penetration into
biofilms during disinfection. Appl Environ Microbiol 60: 4339–4344.
Decho AW (1990) Microbial exopolymer secretions in ocean environments: their role(s) in food
webs and marine processes. In Oceanography and Marine Biology: an Annual Review;
Barnes, M., Ed.; Aberdeen Univ Press: Aberdeen, UK, pp. 73–153.
Decho AW, Visscher PT, Ferry J, Kawaguchi T, He L, Przekop KM, et al., (2009) Autoinducers
extracted from microbial mats reveal a surprising diversity of N-acyl-homoserine lactones
(AHLs) and abundance changes that may relate to diel pH. Environ Microbiol 11: 409–420.
Delbridge L, Coulburn J, Fagerber W & Tisa LS (2004) Community profiles of bacterial
endosymbionts in four species of Caulerpa. Symbiosis 37: 335–344.
Dillon PS, Maki JS & Mitchell R (1989) Adhesion of Enteromorpha swarmers to microbial
films. Microb Ecol 17: 39-47.
Dimitrieva GY, Crawford RL & Yuksel GU (2006) The nature of plant growth-promoting effect
of a Pseudomonad associated with the marine algae Laminaria japonica and linked to
catalase extraction. J Appl Microbiol 100: 1159–1169.
Dionisi F, Hug B, Aeschlimann JM & Houllemar A (1999) Supercritical CO2 extraction for total
fat analysis of food products. J Food Sci 64: 612–615.
Dodgson KS & Price RG (1962) A note on the determination of the ester sulfate content of
sulfated polysaccharides. J Biochem 84: 350–356.
Dong YH, Xu JL, Li XZ & Zhang LH (2000) AiiA, an enzyme that inactivates the acyl
homoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia
carotovora. Proc Natl Acad Sci USA 97: 3526–3531.
Donlan RM (2002) Biofilms: microbial life on surfaces. Emerg Infect Dis 8: 881–890.
Donnell GEM (2007) Antisepsis, disinfection and sterilization: types, action, and resistance.
ASM Press, Washington, DC. pp. 361.
Druehl LD & Hsiao SIC (1969) Axenic culture of laminariales in defined media. Phycologia 8:
47-49.
Duan D, Xu L, Fei X & Xu H (1995) Marine organism attached to seaweed surfaces in Jiaozhou
Bay, China. World J Microbiol Biotechnol 11: 351–352.
Ducklow HW (2000) Bacterial production and biomass in theoceans. In: Kirchman DL (ed)
Microbial ecology of the oceans. Wiley-Liss, New York, p 85–120.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 143
Eboigbodin KE, Ojeda JJ & Biggs CA (2007) Investigating the surface properties of
Escherichia coli under glucose controlled conditions and its effect on aggregation. Langmuir
23: 6691–6697.
Ederth T, Nygren P, Pettitt ME, Ostblom M, Du C-X, Broo K, et al., (2008) Anomolous
settlement behaviour of Ulva linza zoospores on cationic oligopeptide surfaces. Biofouling
24: 303–312.
Emtiazi G, Pooyan M & Shamalnasab M (2007) Cellulase activities in nitrogen fixing
Paenibacillus isolated from soil in N-free media. World J Agricul Sci 3: 602–608.
Engebrecht J & Silverman M (1984) Identification of genes and gene products necessary for
bacterial bioluminescence. Proc Nati Acad Sci USA 81: 4154-4158.
Enos-Berlage JL & McCarter LL (2000) Relation of capsular polysaccharide production and
colonial cell organization to colony morphology in Vibrio parahaemolyticus. J Bacteriol
182: 5513–5520.
Faulkner J (1993) Academic chemistry and the discovery of bioactive marine natural products.
In: (D.H. Attaway and O.R. Zaborsky, eds) Marine biotechnology: pharmaceutical and
bioactive natural products. Plenum Press, New York. pp. 459–470.
Felsenstein J (1985) Confidence limits on phylogenies: An approach using the bootstrap.
Evolution 39: 783-791.
Field KG, Gordon T, Wright M, Rappé M, Vergin K & Giovannoni SJ (1997) Diversity and
depth-specific distribution of Sar11 cluster rRNA genes from marine planktonic bacteria.
Appl Environ Microbiol 63: 63–70.
Finlay JA, Callow ME, Schultz MP, Swain GW & Callow JA (2002) Adhesion strength of
settled spores of the green alga Enteromorpha. Biofouling 18: 251–256.
Fischer B & Brebeck C (1894) Zur Morphologic, Biologie und Systematik der Kahmpilze, der
Monilia Candida Hansen und des Soorerregers (G. Fischer, Jena, 52 pp.; 31 ref.).
Flemming HC & Wingender J (2001) Relevance of microbial extracellular polymeric substances
(EPSs)—Part I: structural and ecological aspects. Water Sci Tech 43:1–8.
Fletcher RL & Callow ME (1992) The settlement, attachment and establishment of marine algal
spores. Br Phycol J 27: 303-329.
Fluerence J, Chenard E & Lucon M (1999) Determination of the nutritional value of proteins
obtained from Ulva armoricana. J Appl Phycol 11: 231-239.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 144
Freitas F, Alves VD, Pais J, Costa N, Oliveira C, Mafra L, et al., (2009). Characterization of an
extracellular polysaccharide produced by a Pseudomonas strain grown on glycerol. Bioresour
Technol 100: 859–865.
Fries L & Aberg S (1978) Morphogenetic effects of phenylacetic acid and p-OH-phenylacetic
acid on the green alga Enteromorpha compressa (L.) Grev. in axenic culture. Z
Pflanzenphysiol 88: 383-388.
Fries L (1963) On the cultivation of axenic red algae. Physiologia Plant 16: 695–708.
Fries L (1975) Some observation on the morphology of Enteromorpha linza (L.) J. Ag. And
Enteromorpha compressa (L.) Grev. In Axenic culture. Bot Mar 18: 251-253.
Fries L (1980) Axenic tissue cultures from the sporophytes of Laminaria digitata and Laminaria
hyperborea (Phaeophyta). J Phycol 16: 475–477.
Fudou R, Iizuka T & Yamanaka S (2001) Haliangicin, a novel antifungal metabolite produced
by a marine Myxobacterium 1. Fermentation and biological characteristics. J Antibiot (Tokyo)
54: 149–152.
Gibor A & Izawa M (1963) The DNA content of the chloroplast of Acetabularia. Proc Natl
Acad Sci USA 50: 1164-1169.
Giovannoni SJ & Stingl U (2005) Molecular diversity and ecology of microbial plankton.
Nature 437: 343–348.
Giovannoni SJ, Rappé MS, Vergin KL & Adair NL (1996) 16S rRNA genes reveal stratified
open ocean bacterioplankton populations related to the green non-sulfur bacteria. Proc Natl
Acad Sci USA 93: 7979–7984.
Glöckner FO, Fuchs BM & Amann R (1999) Bacterioplankton compositions of lakes and
oceans: a first comparison based on fluorescence in situ hybridization. Appl Environ
Microbiol 65: 3721–3726.
Goecke F, Labes A, Wiese J & Imhoff JF (2010) Chemical interactions between marine
macroalgae and bacteria. Mar Ecol Prog Ser 409: 267-300.
Goldstein J, Newbury DE, Joy DC, Lyman CE, Echlin P, Lifshin E, et al., (2003). Scanning
electron microscopy and X-ray micro analysis (3rd ed.). Dordrecht, Netherland:Springer.
Gortari MC & Hours RA (2008) Fungal chitinases and their biological role in the antagonism
onto nematode eggs. A review. Mycol Prog 7: 221-238.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 145
Grossart HP, Levold F, Allgaier M, Simon M & Brinkhoff T (2005) Marine diatom species
harbour distinct bacterial communities. Environ Microbiol 7: 860–873.
Gusev MV, Tambiev AH, Kirikora NN, Shelyastina NN & Aslanyan RR (1987) Callus
formation in seven species of agarophyte marine algae. Mar Biol 95: 593-597.
Hadfield MG (2011) Biofilms and marine invertebrate larvae: What bacteria produce that larvae
use to choose settlement sites. Mar Sci 3: 453-470.
Hallmann J, Quadt-Hallmann A, Mahaffee WF & Kloepper JW (1997) Bacterial endophytes in
agricultural crops. Can J Microbiol 43: 895–914.
Harder T (2009) Marine epibiosis: concepts, ecological consequences and host defence. In:
Flemming HC, Murthy PS, Venkatesan R, Cooksey K (eds) Marine and industrial biofouling.
Springer, Berlin, p 219–231
Harz H & Hegemann P (1991) Rhodopsin-regulated calcium currents in Chlamydomonas.
Nature 351: 489–491.
Hay ME (1996) Marine chemical ecology: what’s known and what’s next. Mar Ecol Prog Ser
200: 103–134.
He RL, Wang GP, Liu XH, Zhang CL & Lin FC (2009) Antagonistic bioactivity of an
endophytic bacterium isolated from Epimedium brevicornu Maxim. Afr J Biotechnol 8: 191-
195.
Head WD & Carpenter EJ (1975) Nitrogen fixation associated with the marine macroalga
Codium fragile. Limnol Oceanogr 20: 815-23.
Hense BA, Kuttler C, Müller J, Rothballer M, Hartmann A & Kreft JU (2007) Does efficiency
sensing unify quorum and diffusion sensing? Nature Rev Microbiol 5: 230-239.
Hiraoka M & Oka N (2008) Tank cultivation of Ulva prolifera in deep seawater using a new
‘germling cluster’ method. J Appl Phycol 20: 97–102.
Hollants J, Leroux O, Leliaert F, Decleyre H, De-Clerck O & Willems A (2011) Who is in
there? exploration of endophytic bacteria within the siphonous green seaweed Bryopsis
(Bryopsidales, Chlorophyta). PLoS ONE 6: e26458
Holmström C, Egan S, Franks A, McCloy S & Kjelleberg S (2002) Antifouling activities
expressed by marine surface associated Pseudoalteromonas species. FEMS Microbiol Ecol
41: 47–58.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 146
Honkanen T & Jormalainen V (2005) Genotypic variation in tolerance and resistance to fouling
in the brown alga Fucus vesiculosus. Oecologia 144: 196–205.
Huggett MJ, Williamson JE, de Nys R, Kjelleberg S & Steinberg PD (2006) Larval settlement
of the common Australian sea urchin Heliocidaris erythrogramma in response to bacteria
from the surface of coralline algae. Oecologia 149: 604–619.
Hunag W & Fujita Y (1997) Callus induction and thallus regeneration in some species of red
algae. Phycol Res 45: 105-111.
Imamura N, Nishijima M, Takadera T & Adachi K (1997) New anticancer antibiotics
pelagiomicins, produced by a new marine bacterium Pelagiobacter variabilis. J Antibiot
(Tokyo) 50: 8–12.
Ista LK, Callow ME, Finlay JA, Coleman SE, Nolasco AC, Simons RH, et al., (2004) Effect of
substratum surface chemistry and surface energy on attachment of marine bacteria and algal
spores. Appl Environ Microb 70: 4151–4157.
Jain RM, Mody K, Mishra A & Jha B (2012) Physicochemical characterization of biosurfactant
and its potential to remove oil from soil and cotton cloth. Carbohyd Polym 89: 1110–1116.
Jha B, Reddy CRK, Thakur MC & Rao MU (2009) Seaweeds of India: the diversity and
distribution of seaweeds of Gujarat coast. Springer, Dordrecht
Jia S, Yu Y, Lin H & Dai Y (2007) Characterization of extracellular polysaccharides from
Nostoc flagelliforme cells in liquid suspension culture. Biotechnol Bioproc E 12: 271-275.
Johannes Reinke (1903) http://en.wikipedia.org/wiki/Johannes_Reinke.
Joint I, Callow ME, Callow JA & Clarke KR (2000) The attachment of Enteromorpha
zoospores to a bacterial biofilm assemblage. Biofouling 16: 151–158.
Joint I, Tait K & Wheeler G (2007) Cross-kingdom signalling: exploitation of bacterial quorum
sensing molecules by the green seaweed Ulva. Philos Trans R Soc Lond B: Biol Sci 362:
1223–1233.
Joint I, Tait K, Callow ME, Callow JA, Milton D, Williams P, et al., (2002) Cell-to-cell
communication across the procaryote–eucaryote boundary. Science 298: 1207.
Jones CG, Lawton JH & Shachak M (1994) Organisms as ecosystem engineers. Oikos 69: 373–
386.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 147
Jordan P, Kloareg B & Vilter H (1991) Detection of vanadate dependent bromoxidases in
protoplasts from brown-algae Laminaria digitata and Laminaria saccharina. J Plant Physiol
137: 520–524.
Kaneda T (1969) Fatty acids in Bacillus larvae, Bacillus lentimorbus, and Bacillus popilliae. J
Bacteriol 98: 143–146.
Kaneda T (1977) Fatty acids of the genus Bacillus: an example of branched-chain preference.
Bacteriol Rev 41: 391–418.
Kang BR, Yang KY, Cho BH, Han TH, Kim IS, Lee MC, Anderson AJ & Kim YC (2006)
Production of indole-3-acetic acid in the plant-beneficial strain Pseudomonas chlororaphis
O6 is negatively regulated by the global sensor kinase GacS. Curr Microbiol 52: 473–476.
Kavita K, Mishra A & Jha B (2011) Isolation and physico-chemical characterisation of
extracellular polymeric substances produced by the marine bacterium Vibrio
parahaemolyticus. Biofouling 27: 309 -317.
Khanna YP & Kuhn WP (1997) Measurement of crystalline index in nylons by DSC:
Complexities and recommendations. J Polym Sci Part B: Poly Phys 35: 2219–2231.
Kientz B, Thabard M, Cragg SM, Pope J & Hellio C (2011) A new method for removing
microflora from macroalgal surfaces: an important step for natural product discovery. Bot
Mar 54: 457–469.
Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions
through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
Kiorboe T (2001) Formation and fate of marine snow: small-scale processes with large scale
implications. Sci Mar 65: 57–71.
Kittell BL, Helinski DR & Ditta GS (1989) Aromatic aminotransferase activity and indoleacetic
acid production in Rhizobium meliloti. J Bacteriol 171: 5458–5466.
Koga J (1995) Structure and function of indolepyruvate decarboxylase, a key enzyme in indole-
3-acetic acid biosynthesis. Biochim Biophys Acta 1249: 1–13.
Koga J, Syono K, Ichikawa T & Adachi T (1994) Involvement of L tryptophan aminotransferase
in indole-3-acetic acid biosynthesis in Enterobacter cloacae. Biochim Biophys Acta 1209:
241–247.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 148
Krishnan S, Ayothi R, Hexemer A, Finlay JA, Sohn KE, Perry R, et al., 2006. Anti-biofouling
properties of comb-like block copolymer with amphiphilic side-chains. Langmuir 22: 5075–
5086.
Kumar CG, Joo HS, Choi JW, Koo YM & Changa CS (2004) Purification and characterization
of an extracellular polysaccharide from haloalkalophilic Bacillus sp. I-450. Enzyme Microb
Technol 34: 673–681.
Kumari P, Kumar M, Gupta V, Reddy CRK & Jha B (2010) Tropical marine macroalgae as
potential sources of nutritionally important PUFAs. Food Chem 120: 749–757.
Lachnit T, Blümel M, Imhoff JF, & Wahl M (2009) Specific epibacterial communities on
macroalgae: phylogeny matters more than habitat. Aquat Biol 5: 181–186.
Lachnit T, Meske D, Wahl M, Harder T & Schmitz R (2011) Epibacterial community patterns
on marine macroalgae are host-specific but temporally variable. Environ Microbiol 13: 655–
665.
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of
bacteriophage T4. Nature 227: 680–685.
Lahaye M & Axelos MAV (1993) Gelling properties of water soluble polysaccharides from
proliferating marine green seaweeds (Ulva spp). Carbohyd Polym 22: 261–265.
Lakshmanaperumalsamy P & Purushothaman A (1982) Heterotrophic bacteria associated with
seaweed. Proc Indian Acad Sci Plant Sci 91: 487–493.
Lane AL & Kubanek J (2008) Secondary metabolite defences against pathogens and biofoulers.
In: Amsler CH (ed) Algal chemical ecology, Chap. 11. Springer, Berlin, p 229–243
Lane DJ (1991) 16S/23S rRNA Sequencing. John Wiley and Sons: Chichester, pp 177–203.
Lapara TM, Nakatsu CH, Pantea L & Alleman JE (2000) Phylogenetic analysis of bacterial
communities in mesophilic and thermophilic bioreactors treating pharmaceutical wastewater.
Appl Environ Microbiol 66: 3951–3959.
Laspidou CS & Rittmann BE (2002) A unified theory for extracellular polymeric substances,
soluble microbial products, and active and inert biomass. Water Res 36: 2711–2720.
Laus MC, Logman TJ, Lamers GE, Van Brussel AAN, Carlson RW & Kijne JW (2006) A novel
polar surface polysaccharide from Rhizobium leguminosarum binds host plant lectin. Mol
Microbiol 59: 1704–1713.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 149
Lawlor HJ, Borowitzka MA & McComb JA (1991) A rapid and inexpensive method for surface
sterilisation of Ecklonia radiata (Phaeophyta) for tissue culture. Bot Mar 34: 261–264.
Laycock RA (1974) The detrital food chain based on seaweeds. 1. Bacteria associated with the
surface of Laminaria fronds. Mar Biol 25: 223–231.
Le Gall Y, Braud JP & Kloareg B (1990) Protoplast production in Chondrus crispus
gametophytes (Gigartinales, Rhodophyta). Plant Cell Rep 8: 582-585.
Leblanc C, Colin C, Cosse A, Delage L, La Barre S, Morin P, et al., (2006) Iodine transfers in
the coastal marine environment: the key role of brown algae and of their vanadium-
dependent haloperoxidases. Biochimie 88: 1773–1785.
Lee VT, Matewish JM, Kessler JL, Hyodo M, Hayakawa Y & Lory S (2007) A cyclic-di-GMP
receptor required for bacterial exopolysaccharide production. Mol Microbiol 65:1474–1484.
Liu XW & Gordon ME (1987) Tissue and cell culture of New Zealand Pterocladia and
Porphyra species. Twelfth international seaweed symposium. Hydrobiologia. 151/152: 147-
154.
Loaec M, Olier R & Guezennec J (1997) Uptake of lead, cadmium and zinc by a novel bacterial
exopolysaccharide. Water Rse 31: 1171–1179.
Lobban CS & Harrison PJ (1996) Seaweed ecology and physiology. Cambridge University
Press, Cambridge
Lodeiro AR & Favelukes G (1999) Early interactions of Bradyrhizobium japonicum and
soybean roots: specificity in the process of adsorption. Soil Biol Biochem 31: 1405–1411.
Lodeiro AR, Lopez-Garcia SL, Vazquez TEE & Favelukes G (2000) Stimulation of
adhesiveness, infectivity, and competitiveness for nodulation of Bradyrhizobium japonicum
by its pretreatment with soybean seed lectin. FEMS Microbiol Lett 188: 177–184.
Logan BE & Hunt JR (1987) Advantages to microbes of growth in permeable aggregates in
marine systems. Limnol Oceanogr 32: 1034–1048.
Longford SR, Tujula NA, Crocetti G, Holmes AJ, Holmström C, Kjelleberg S, et al., (2007)
Comparisons of diversity of bacterial communities associated with three sessile marine
eukaryotes. Aquat Microb Ecol 48: 217–229.
Lustigman B, Lee LH, Thees N & Masucci J (1992) Production of antibacterial substances by
macroalgae of the New York/New Jersey Coast, USA. Bull Environ Contam Toxicol 49:
743–749
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 150
Mack D., Fischer W, Krokotsch A, Leopold K, Hartmann R, Egge H, et al., (1996) The
intercellular adhesin involved in biofilm accumulation of Staphylococcus epidermidis is a
linear beta-1,6-linked glucosaminoglycan: purification and structural analysis. J Bacteriol
178: 175–183.
Malmstrom RR, Kiene RP & Kirchman DL (2004) Identification and enumeration of bacteria
assimilating dimethylsulfoniopropionate (DMSP) in the North Atlantic and Gulf of Mexico.
Limnol Oceanogr 49: 597–606.
Mancuso-Nichols CA, Garon S, Bowman JP, Raguenes G & Guezennec J (2004) Production of
exopolysaccharides by Antarctic marine bacterial isolates. J Appl Microbiol 96: 1057-1066.
Mandal SK, Singh RP & Patel V (2011) Isolation and characterization of exopolysaccharide
secreted by a toxic dinoflagellate, Amphidinium carterae Hulburt 1957 and its probable role
in harmful algal blooms (HABs). Microb Ecol 62: 518–527
Mantri VA, Singh RP, Bijo AJ, Kumari P, Reddy CRK & Jha B (2011) Differential response of
varying salinity and temperature on zoospore induction, regeneration and daily growth rate in
Ulva fasciata (Chlorophyta, Ulvales). J Appl Phycol 23: 243–250.
Manzoni M & Rollini M (2001) Isolation and characterization of the exopolysaccharide
produced by Daedalea quercina. Biotechnol Lett 23: 1491– 1497.
Marshall K, Joint I, Callow ME & Callow JA (2006) Effect of marine bacterial isolates on the
growth and morphology of axenic plantlets of the green alga Ulva linza. Micro Eco 52: 302-
310.
Maruyama A, Maeda M & Shimizu U (1986) Occurrence of plant hormone (cytokinin)-
producing bacteria in the sea. J Appl Bacteriol 61: 569-74.
Maruyama A, Maeda M & Simidu U (1990) Distribution and classification of marine bacteria
with the ability of cytokinin and auxin production. Bull Jpn Soc Microbial Ecol 5: 1–8.
Maruyama A, Yamaguchi I, Maeda M & Simidu U (1988) Evidence of cytokinin production by
a marine bacterium and its taxonomic characteristics. Can J microbiol 34: 829-33.
Matsuo Y, Imagawa H, Nishizawa M & Shizuri Y (2005) Isolation of an algal morphogenesis
inducer from a marine bacterium. Science 307: 1598.
Matsuo Y, Suzuli M, Kasai H, Shizuri Y & Harayama S (2003) Isolation and phylogenetic
characterization of bacteria capable of inducing differentiation in the green alga Monostroma
oxyspermum. Environ Microbiol 5: 25-35.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 151
Matz C, Webb JS, Schupp PJ, Phang SY Penesyan A, Egan S, et al., (2008) Marine biofilm
bacteria evade eukaryotic predation by targeted chemical defense. PLoS ONE 3: e2744
Maugeri TL, Gugliandolo C, Caccamo D, Panico A, Lama L, Gambacorta A, et al., (2002) A
halophilic thermotolerant Bacillus isolated from a marine hot spring able to produce a new
exopolysaccharide. Biotechnol Lett 24: 515-519.
Maximilien R, de Nys R, Holmström C, Gram L, Givskov M, Crass K, et al., (1998) Chemical
mediation of bacterial surface colonisation by secondary metabolites from the red alga
Delisea pulchra. Aquat Microb Ecol 15: 233–246.
McHugh DJ (2002) Prospects for Seaweed Production in Developing Countries. FAO Fisheries
Circular No. 968 FIIU/C968 (En). Food and Agriculture Organization of the United Nations
Publication, Rome, pp. 2–6.
Meena R, Prasad K, Ramavat BK, Ghosh PK, Eswaran K, Thiruppathi S, et al., (2007)
Preparation, characterization and benchmarking of agarose from Gracilaria dura of Indian
waters. Carbohyd Polym 69: 179–188.
Meusnier I, Olsen JL, Stam WT, Destombe C & Valero M (2001) Phylogenetic analyses of
Caulerpa taxifolia (Chlorophyta) and of its associated bacterial microflora provide clues to
the origin of the Mediterranean introduction. Mol Ecol 10: 931–946.
Milton DL, Chalker VJ, Kirke D, Hardman A, Camara M & Williams P (2001) The LuxM
homologue VanM from Vibrio anguillarum directs the synthesis of N- (3-hydroxyhexanoyl)
homoserine lactone and N-hexanoyl homoserine lactone. J Bacteriol 183: 3537–3547.
Mishra A, Kavita K & Jha B (2011) Characterization of extracellular polymeric substances
produced by micro-algae Dunaliella salina. Carbohyd Polym 82: 852-857.
Mooney PA & Van SJ (1986) Algae and cytokinins. J Plant Physiol 123: 1-21.
Morin D, Grasland B, Vallée-Réhel K, Dufau C & Haras D (2003) On-line high performance
liquid chromatography-mass spectrometric detection and quantification of N-acyl-
homoserine lactones, quorum sensing signal molecules, in the presence of biological
matrices. J Chromatogr A 1002: 79–92.
Murakami A, Miyashita H, Iseki M, Adachi K & Mimuro M (2004) Chlorophyll d in an
epiphytic cyanobacterium of red algae. Science 303: 1633.
Naeem S (1998) Species redundancy and ecosystem reliability. Conserv Biol 12: 39–45.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 152
Nakanishi K & Nishijima M (1996) Bacteria induce morphogenesis in Ulva pertusa
(Chlorophyta) grown under axenic condition. J Phycol 32: 479-482.
Nakanishi K, Nishijima M, Nomoto AM, Yamazaki A & Saga N (1999) Requisite Morphologic
Interaction for Attachment between Ulva pertusa (Chlorophyta) and Symbiotic Bacteria. Mar
Biotechnol 1: 107–111.
Nealson KH & Hastings JW (1979) Bacterial Bioluminescence: Its Control and Ecological
Significance. Microbiol Rev 43: 496-518.
Nichols CM, Lardiere SG, Bowman JP, Nichols PD, Gibson JAE & Guezennec J (2005)
Chemical characterization of exopolysaccharides from Antarctic marine bacteria. Microb
Ecol 49: 578–589.
Nielsen PH & Jahn A (1999) Microbial Extracellular Polymeric Substances: Characterization,
Structure and Function. In: Wingender J, Neu TR, Flemming HC, (eds) In Extraction of EPS,
Germany: Springer-Verlag, Berlin. pp 50-72.
Ntougias S & Russell NJ (2000) Bacillus sp. WW3-SN6, a novel facultatively alkaliphilic
bacterium isolated from the wash waters of edible olives. Extremophiles 4: 201–208.
Nylund GM, Persson F, Lindegarth M, Cervin G, Hermansson M & Pavia H (2010) The red
alga Bonnemaisonia asparagoides regulates epiphytic bacterial abundance and community
composition by chemical defence. FEMS Microbiol Ecol 71: 84–93.
Pakker H & Breeman AM (1966) Temperature responses of tropical to warm temperature
Atlantic seaweeds. II. Evidence for ecotypic differentiation in amphi-Atlantic tropical
Mediterranean species. Eur J Phycol 31: 133–141.
Palmer RJ, Gordon SM, Cisar JO & Kolenbrander PE (2003) Coaggregation-mediated
interactions of streptococci and actinomyces detected in initial human dental plaque. J
Bacteriol 185: 3400–3409.
Park M, Km C, Yang J, Lee H, Shin W, Kim S & Sa T (2005) Isolation and characterization of
diazotrophic growth promotion bacteria from rhizosphere of agricultural crop of Korea.
Microbiol Res 160: 127–133.
Patel P, Callow ME, Joint I & Callow JA (2003) Specificity in the settlement-modifying
response of bacterial biofilms towards zoospores of the marine alga Enteromorpha. Environ
Microbiol 5: 338 –349.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 153
Patten CL & Glick BR (2002) Role of Pseudomonas putida indoleacetic acid in development of
the host plant root system. Appl Environ Microb 68: 3795–3801.
Paul NA, de Nys R & Steinberg PD (2006) Chemical defense against bacteria in the red alga
Asparagopsis armata: linking structure with function. Mar Ecol Prog Ser 306: 87–101.
Paul VJ & Puglisi MP (2004) Chemical mediation of interactions among marine organisms. Nat
Prod Rep 21: 189–209.
Pedraza RO, Ramirez-Mata A, Xiqui ML & Baca BE (2004) Aromatic amino acid
aminotransferase activity and indole-3- acetic acid production by associative nitrogen-fixing
bacteria. FEMS Microbiol Lett 233: 15–21
Petrini LE, Petrini O & Laflamme G (1989) Recovery of endophytes of Abiens balsamea from
needles and galls of Paradiplosis tumifex. Phytoprotection 70: 97–103.
Potin P, Bouarab K, Küpper F & Kloareg B (1999) Oligosaccharide recognition signals and
defense reactions in marine plant-microbe interactions. Curr Opin Microbiol 2: 276–283.
Poulsen NC, Spector I, Spurck TP, Schultz TF & Wetherbee R (1999) Diatom gliding is the
result of an actin-myosin motility system. Cell Motil Cytoskel 44: 23–33.
Provasoli L & Carlucci AF (1974) Vitamins and growth regulators. In Stewart, W. D. P. (eds.)
Algal Physiology and Biochemistry. Blackwell, Oxford, pp. 74:1-87.
Provasoli L & Pinter IJ (1980) Bacteria induced polymorphysm in an axenic laboratory strain of
Ulva lactuca (Chlorophyceae). J Phycol 32: 479–482.
Provasoli L & Pintner IJ (1953) Ecological implications of in vitro nutritional requirements of
algal flagellates. Ann N V Acad Sci 56: 839-851.
Provasoli L & Pintner IJ (1964) Symbiotic relationship between microorganism and seaweeds.
Am J Bot 51: 68 1.
Provasoli L (1958) Effect of plant hormones on Ulva. Biol Bull 114:375-84.
Provasoli L (1968) Media and prospects for the cultivation of marine algae. In Watanabe, A. &
Hattore, A. [Eds.] Culture and Collection of Algae. Jap. Soc. Plant Physiol Tokyo pp. 63–75.
Rainer BV, Venzke K & Blaschek W (2007) Structural investigation of a polysaccharide
released by the cyanobacterium Nostoc insulare. J Appl Phycol 19: 255–262.
Rao D, Webb JS & Kjelleberg (2005) Competitive interactions in mixed-species biofilms
containing the marine bacterium Pseudoalteromonas tunicate. Appl Environ Microbiol 71:
1729-1736.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 154
Rao D, Webb JS, Holmström C, Case R, Low A, Steinberg P, et al., (2007) Low densities of
epiphytic bacteria from the marine alga Ulva australis inhibits settlement of fouling
organisms. Appl Environ Microbiol 73: 7844–7852.
Rappé MS, Vergin K & Giovannoni SJ (2000) Phylogenetic comparisons of a coastal
bacterioplankton community with its counterparts in open Ocean and freshwater systems.
FEMS Microbiol Ecol 33: 219–232.
Reddy CRK, Jha B, Fujita Y & Ohno M (2008) Seaweed micropropagation techniques and their
potentials: an overview. J Appl Phycol 20: 609–617.
Reddy CRK, Kumar GRK, Siddhanta AK & Tewari A (2003) In vitro somatic embryogenesis
and regeneration of somatic embryos from pigmented callus of Kappaphycus alvarezii (Doty)
DOTY (Rhodophyta, Gigartinales). J Phycol 39: 610–616.
Renn DW (1990) Seaweeds and biotechnology – inseparable companions. Hydrobiologia 204–
205: 7–13.
Ricou P, Pinel E & Juhasz N.(2005) Temperature experiments for improved accuracy in the
calculation of polyamide-11 crystallinity by X-raydiffraction. Advances in X-ray analysis
International Centre for Diffraction Data.
Riquelme C, Rojas A, Flores V & Correa JA (1997) Epiphytic bacteria in a copper-enriched
environment in Northern Chile. Mar Pollut Bull 34: 816–820
Robaina RR, Garcia G & Luque A (1990) The effects of physical characteristics of the culture
medium on the development of the red seaweeds in the tissue culture. Hydrobiologia
204/205: 137-142.
Rojas A, Holguin G, Glick BR & Bashan V (2001) Synergism between Phyllobacterium sp.
(N2-fixer) and Bacillus licheniformis (P-solubilizer), both from a semiarid mangrove
rhizosphere. FEMS Microbiol Ecol 35:181–187.
Rosenberg G & Paerl HW (1981) Nitrogen fixation by blue green algae associated with the
siphonous green seaweed Codium decorticatum: effects on ammonium uptake. Mar Biol 61:
151–158.
Rougeaux H, Talaga P, Carlson RW & Guezennec J (1998) Structural studies of an
exopolysaccharide produced by Alteromonas macleodii subsp. fijiensis originating from a
deep-sea hydrothermal vent. Carbohyd Res 312: 53-59.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 155
Rusch DB, Halpern AL, Sutton G, Heidelberg KB, Williamson S, Yooseph S, et al., (2007). The
Sorcerer II global ocean sampling expedition: Northwest Atlantic through eastern tropical
Pacific. PLoS Biology 5: e77
Saga N & Sagai Y (1983). Axenic tissue culture and callus formation of the marine brown alga
Laminaria angustata. Bull Jap Soc Sci Fish 49: 1561-1563.
Saitou N & Nei M (1987) The neighbor-joining method: A new method for reconstructing
phylogenetic trees. Mol Biol Evol 4: 406-425.
Sakai T, Ishizuka K & Kato I (2003) Isolation and characterization of a fucoidan-degrading
marine bacterium. Mar Biotechnol 5: 409–416.
Sakami T (1996) Effects of algal excreted substances on the respiration activities of epiphytic
bacteria on the brown alga, Eisenia bicyclis Kjellman. Fish Sci 62: 394–396.
Sale PF (1976) Reef fish lottery. Nat Hist 85: 60–65.
Sandsdalen E, Haug T, Stensvag K & Styrvold OB (2003) The antibacterial effect of a
polyhydroxylated fucophlorethol from the marine brown alga, Fucus vesiculosus. World J
Microbiol Biotechnol 19: 777–782.
Sapp M, Schwaderer AS, Wiltshire KH, Hoppe HG, Gerdts G & Wichels A (2007) Species-
specific bacterial communities in the phycosphere of microalgae? Microb Ecol 53: 683–699.
Schembri MA, Kjaergaard K & Klemm P (2003) Global gene expression in Escherichia coli
biofilms. Mol Microbiol 48: 253–267.
Schiel DR & Lilley SA (2007) Gradients of disturbance to an algal canopy and the modification
of an intertidal community. Mar Ecol Progr Ser 339: 1–11.
Schmidt TM, DeLong EF & Pace NR (1991) Analysis of a marine picoplankton community by
16S ribosomal RNA gene cloning and sequencing. J Bacteriol 173: 4371–4378.
Schumacher JF, Long CJ, Callow ME, Callow JA, & Brennan AB (2008) Engineered nanoforce
gradients for inhibition of settlement (attachment) of swimming algal spores. Langmuir 24:
4931–4937.
Semenova EV, Shlykova DS, Semenov AM, Ivanov MN, Shelyakov OV & Netrusov AI (2009)
Bacteria epiphytes of brown macro alga in oil utilization in North Sea ecosystems. Moscow
Univ Biol Sci Bull 64: 107–110
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 156
Sessitsch A, Reiter B & Berg G (2004) Endophytic bacterial communities of field-grown potato
plants and their plant growth-promoting and antagonistic abilities. Can J Microbiol 50: 239–
249.
Shannon CE & Weaver W (1963) The Mathematical theory of communication. University of
Illinois Press: Urbana, IL, USA.
Shaw PD, Ping G, Daly SL, Cha C, Cronan JE, Rinehart KL, et al., (1997) Detecting and
characterizing N-acyl homoserine lactone signal molecules by thin-layer chromatography.
Proc Natl Acad Sci USA 94: 6036–6041.
Shiba T & Taga N (1980) Heterotrophic bacteria attached to seaweeds. J Exp Mar Biol Ecol 47:
251–258.
Shimazu A, Miyazaki T & Ikeda K (2000) Interpretation of d-spacing determined by wide angle
X-rays cattering in 6 FDA - based polyimide by molecular modelling. J Membrane Sci 166:
113–118.
Shin HW (2008) Rapid attachment of spores of the fouling alga Ulva fasciata on biofilms. J
Environ Biol 29: 613-619.
Siddhanta AK, Meena R, Prasad K, Ramavat BK, Ghosh PK, Eswaran K, et al., (2005) A cost-
effective process for preparing agarose from Gracilaria spp. US Patent 2005/ 0267296 A1.
Siddhanta AK, Shanmugam M, Mody KH, Goswami AM & Ramavat BK (1999) Sulphated
polysaccharides of Codium dwarkense Boergs from the west coast of India: Chemical
composition and blood anticoagulant activity. Int J Biol Macromol 26:151-154.
Sieburth JMN (1969) Studies on algal substances in the sea. III. The production of extracellular
organic matter by littoral marine algae. J Exp Mar Biol Ecol 3: 290–309.
Simon M, Glöckner FO & Amann R (1999) Different community structure and temperature
optima of heterotrophic picoplankton in various regions of the Southern Ocean. Aquat
Microb Ecol 18: 275–285.
Singh RP, Shukla MK, Mishra A, Kumari P, Reddy, Reddy CRK, et al., (2011) Isolation and
characterization of exopolysaccharides from seaweed associated bacteria Bacillus
licheniformis. Carbohyd Polym 84: 1019–1026.
Staufenberger T, Thiel V, Wiese J & Imhoff JF (2008) Phylogenetic analysis of bacteria
associated with Laminaria saccharina. FEMS Microbiol Ecol 64: 65–77.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 157
Steinberg PD & de Nys R (2002) Chemical mediation of colonization of seaweeds surfaces. J
Phycol 38: 621–629.
Steinberg PD, de Nys R & Kjelleberg S (2002) Chemical cues for surface colonization. J Chem
Ecol 28: 1935–1951.
Steinberg PD, Schneider R & Kjelleberg S (1997) Chemical defenses of seaweeds against
microbial colonization. Biodegradation 8: 211–220.
Sturz AV, Christie BR & Nowak J (2000) Bacterial endophytes: potential role in developing
sustainable systems of crop production. Crit Rev Plant Sci 19: 1–30.
Sun X, He Y, Xu N, Xia Y & Liu Z (2012) Isolation and identification of two strains of
pathogenic bacteria and their effects on the volatile metabolites of Gracilariopsis
lemaneiformis (Rhodophyta). J Appl Phycol 24: 277–284.
Sutherland IW (2001) Biofilm exopolysaccharides: a strong and sticky framework.
Microbiology 147: 3–9.
Suto S (1959) Skeletonema no tame no jinkou baiyoueki. Suisan-Zouskoku. 7: 17–19 [in
Japanese].
Tait K, Joint I, Daykin M, Milton DL, Williams P & Cámara M (2005). Disruption of quorum
sensing in seawater abolishes attraction of zoospores of the green alga Ulva to bacterial
biofilms. Environ Microbiol 2: 229–240.
Tait K, Williamson H, Atkinson S, Williams P, Cámara M & Joint I. (2009) Turnover of
quorum sensing signal molecules modulates cross-kingdom signalling. Environ Microbiol
11: 1792–1802.
Tamura K, Dudley J, Nei M & Kumar S (2007) MEGA4: Molecular Evolutionary Genetics
Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596–1599.
Tamura K, Peterson D, Peterson N, Stecher G, Nei M & Kumar S (2011) MEGA5: Molecular
evolutionary genetics analysis using maximum likelihood, evolutionary distance, and
maximum parsimony methods. Mol Biol Evol 28: 2731–2739.
Taylor MW, Schupp PJ, Dahllöf I, Kjelleberg S & Steinberg PD (2004) Host specificity in
marine sponge-associated bacteria, and potential implications for marine microbial diversity.
Environ Microbiol 6: 121–130.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 158
Taylor MW, Schupp PJ, de Nys R, Kjelleberg S & Steinberg PD (2005) Biogeography of
bacteria associated with the marine sponge Cymbastela concentrica. Environ Microbiol 7:
419–433.
Tatewaki M & Provasoli L (1977) Phylogenetic affinities in Monostroma and relative genera in
axenic culture. J Phycol 19: 409-416.
Tatewaki M, Provasoli L & Pintner IJ (1983) Morphologenesis of Monostroma oxyspermum
(Kutz) Doty (chlorophyceae) in axenic culture, especially in bioalgal culture. J Phycol 19:
409-416.
Thomas RWSP & Allsopp D (1983) The effects of certain periphyric marine bacteria upon the
settlement and growth of Enteromorpha, a fouling alga. In: Oxley T A, Barry S (eds)
Biodeterioration 5, pp 348-357
Tujula NA, Crocetti GR, Burke C, Thomas T, Holmstrom C & Kjelleberg S (2010) Variability
and abundance of the epiphytic bacterial community associated with a green marine
Ulvacean alga. ISME J 4: 301–311.
Turner JB & Friedmann EI (1974) Fine structure of capitular filaments in the coenocytic green
alga Penicillus. J Phycol 10: 125–134.
Van Rhijn P, Luyten E, Vlassak K & Vanderleyden J (1996) Isolation and characterization of a
pSym locus of Rhizobium sp BR816 that extends nodulation ability of narrow host range
Phaseolus vulgaris symbionts to Leucaena leucocephala. Mol Plant Microbe In 9: 74–77.
Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA, et al., (2004).
Environmental genome shotgun sequencing of the Sargasso Sea. Science 304: 66–74.
Vilter H, Glombitza KW & Grawe A (1983) Peroxidases from Phaeophyceae. 1. Extraction and
detection of the peroxidases. Bot Mar 26: 331–339.
Walters U, Miron G & Bourget E (1999) Endoscopic observations of invertebrate larval
substratum exploration and settlement. Mar Ecol Prog Ser 182: 95-108.
Wang Q, Garrity GM, Tiedje JM & Cole JR (2007).Naive Bayesian classifier for rapid
assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbial 73:
5261-7.
Weinberger F, Beltran J, Correa JA, Lion U, Pohnert G, Kumar N, et al., (2007) Spore release in
Acrochaetium sp. (Rhodophyta) is bacterially controlled. J Phycol 43: 235-241.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 159
Weinberger F, Friedlander M & Hoppe HG (1999) Oligoagars elicit a physiological response in
Gracilaria conferta (Rhodophyta). J Phycol 35: 747 – 755.
Weinberger F, Hoppe HG & Friedlander M (1997) Bacterial induction and inhibition of a fast
necrotic response in Gracilaria conferta. J Appl Phycol 9: 277–285.
Welbaum GE, Sturz AV, Dong ZM & Nowak J (2004) Managing soil microorganisms to
improve productivity of agro-ecosystems. Crit Rev Plant Sci 23: 175–193.
Wenzel SC & Müller R (2005) Formation of novel secondary metabolites by bacterial
multimodular assembly lines: Deviations from textbook biosynthetic logic. Curr Opin Chem
Biol 9: 447–458.
Wheeler GL, Tait K, Taylor A, Brownlee C & Joint, I (2006) Acyl-homoserine lactones
modulate the settlement rate of zoospores of the marine alga Ulva intestinalis via a novel
chemokinetic mechanism. Plant Cell Environ 29: 608–618.
Wichard T & Oertel W (2010) Gametogenesis and gamete release of Ulva mutabilis and Ulva
lactuca (Chlorophyta): regulatory effects and chemical characterization of the ‘swarming
inhibitor’. J Phycol 46: 248–259.
Wieczorek SK & Todd CD (1997) Inhibition and facilitation of bryozoan and ascidian
settlement by natural multi-species biofilms: effects of film age and the roles of active and
passive larval attachment. Mar Biol 128: 463–473.
Williams P (2007) Quorum sensing, communication and cross-kingdom signalling in the
bacterial world. Microbiology 153: 3923–3938.
Wirtanan G (1995) Biofilm formation and its elimination from food processing equipments.
Helsinki, University of technology, Espoo, Finland. 343 pp.
Whitman WB, Coleman DC & Wiebe WJ (1998) Prokaryotes: the unseen majority. Proc Natl
Acad Sci USA 95:6578–6583.
Wong TY, Preston LA & Schiller NL (2000) Alginate lyase: review of major sources and
enzyme characteristics, structure–function analysis, biological roles, and applications. Annu
Rev Microbiol 54: 289–340.
Woo-Jung K, Kim SM, Lee YH, Kim HG, Kim HK, Moon SH, et al., (2008) Isolation and
characterization of marine bacterial strain degrading fucoidan from Korean Undaria
pinnatifida sporophylls. J Microbiol Biotechnol 18: 616–623.
References
Studies on certain seaweed - bacterial interaction from Saurashtra coast 160
Xue-wu L & Gordon ME (1987) Tissue and cell culture of New Zealand Pterocladia and
Porphyra species. Hydrobiologia 151–152: 147–154.
Yemm EW & Willis AJ (1954) The estimation of carbohydrates in plant extracts by anthrone. J
Biochem 57: 508–514.
Yokoya NS (2000) Apical callus formation and plant regeneration controlled by plant growth
regulators on axenic culture of the red alga Gracilariopsis tenuifrons (Gracilariales,
Rhodophyta). Phycol Res 48: 133–142.
Yokoya NS, Guimaraes SMPB & Handro W (1993) Development of callus like structure and
plant regeneration in thallus segment of Grateloupia filiformis Kutzing (Rhodophyta).
Hydrobiologia 260/261: 407-413.
Yoshikawa K, Takadera T, Adachi K, Nishijima M & Sano H (1997) Korormicin, a novel
antibiotic specifically active against marine Gram-negative bacteria, produced by a marine
bacterium. J Antibiot (Tokyo) 50: 949–953.
Yu Y, Breitbart M, McNairnie P & Rohwer F (2006) FastGroupII: A web-based bioinformatics
platform for analyses of large 16S rDNA libraries. BMC Bioinformatics 7: 57.
Zheng L, Han X, Chen H, Lin W & Yan X (2005) Marine bacteria associated with marine
macroorganisms: the potential antimicrobial resources. Ann Microbiol 55: 119–124.
Zhenming C & Yan F (2005) Exopolysaccharides from marine bacteria. J Ocean University
China 4: 67-74.